Orthologous regulated operons containing pydB gene
| Regulog: | RutR - Burkholderia |
| Regulator type: | Transcription factor |
| Regulator family: | TetR |
| Regulation mode: | repressor (activator) |
| Biological process: | Pyrimidine utilization |
| Effector: | Uracil |
| Phylum: | Proteobacteria/beta |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Burkholderia cepacia AMMD | ||||
|
Position: -188
Score: 6.8329 Sequence: ACCTGTCCAATCGGACAGGA
Locus tag: Bamb_5967
Name: pydC Funciton: Beta-ureidopropionase (EC 3.5.1.6)
Locus tag: Bamb_5966
Name: pydX Funciton: Pyridine nucleotide-disulphide oxidoreductase associated with reductive pyrimidine catabolism
Locus tag: Bamb_5965
Name: pydA Funciton: Dihydropyrimidine dehydrogenase [NADP+] (EC 1.3.1.2); Dihydroorotate dehydrogenase (EC 1.3.3.1)
Locus tag: Bamb_5964
Name: pydP Funciton: Pyrimidine permease in reductive pathway
Locus tag: Bamb_5963
Name: pydB Funciton: Dihydropyrimidinase (EC 3.5.2.2) |
||||
| pydC-pydX-pydA-pydP-pydB | -188 | 6.8 | ACCTGTCCAATCGGACAGGA | Bamb_5967 |
| Burkholderia phymatum STM815 | ||||
|
Position: -200
Score: 6.50528 Sequence: ACCTGTCCATTCGGACAGGA
Locus tag: Bphy_1536
Name: pydC Funciton: Beta-ureidopropionase (EC 3.5.1.6)
Locus tag: Bphy_1535
Name: pydX Funciton: Pyridine nucleotide-disulphide oxidoreductase associated with reductive pyrimidine catabolism
Locus tag: Bphy_1534
Name: pydA Funciton: Dihydropyrimidine dehydrogenase [NADP+] (EC 1.3.1.2); Dihydroorotate dehydrogenase (EC 1.3.3.1)
Locus tag: Bphy_1533
Name: pydP Funciton: Pyrimidine permease in reductive pathway
Locus tag: Bphy_1532
Name: pydB Funciton: Dihydropyrimidinase (EC 3.5.2.2) |
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| pydC-pydX-pydA-pydP-pydB | -200 | 6.5 | ACCTGTCCATTCGGACAGGA | Bphy_1536 |
| Burkholderia sp. 383 | ||||
|
Position: -180
Score: 6.8329 Sequence: ACCTGTCCAATCGGACAGGA
Locus tag: Bcep18194_C6654
Name: pydC Funciton: Beta-ureidopropionase (EC 3.5.1.6)
Locus tag: Bcep18194_C6655
Name: pydX Funciton: Pyridine nucleotide-disulphide oxidoreductase associated with reductive pyrimidine catabolism
Locus tag: Bcep18194_C6656
Name: pydA Funciton: Dihydropyrimidine dehydrogenase [NADP+] (EC 1.3.1.2); Dihydroorotate dehydrogenase (EC 1.3.3.1)
Locus tag: Bcep18194_C6657
Name: pydP Funciton: Pyrimidine permease in reductive pathway
Locus tag: Bcep18194_C6658
Name: pydB Funciton: Dihydropyrimidinase (EC 3.5.2.2) |
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| pydC-pydX-pydA-pydP-pydB | -180 | 6.8 | ACCTGTCCAATCGGACAGGA | Bcep18194_C6654 |
| Burkholderia vietnamiensis G4 | ||||
|
Position: -186
Score: 6.8329 Sequence: ACCTGTCCAATCGGACAGGA
Locus tag: Bcep1808_5509
Name: pydC Funciton: Beta-ureidopropionase (EC 3.5.1.6)
Locus tag: Bcep1808_5510
Name: pydX Funciton: Pyridine nucleotide-disulphide oxidoreductase associated with reductive pyrimidine catabolism
Locus tag: Bcep1808_5511
Name: pydA Funciton: Dihydropyrimidine dehydrogenase [NADP+] (EC 1.3.1.2); Dihydroorotate dehydrogenase (EC 1.3.3.1)
Locus tag: Bcep1808_5512
Name: pydP Funciton: Pyrimidine permease in reductive pathway
Locus tag: Bcep1808_5513
Name: pydB Funciton: Dihydropyrimidinase (EC 3.5.2.2) |
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| pydC-pydX-pydA-pydP-pydB | -186 | 6.8 | ACCTGTCCAATCGGACAGGA | Bcep1808_5509 |
| Burkholderia xenovorans LB400 | ||||
|
Position: -168
Score: 6.64833 Sequence: ACCTGTCCAACTGGACAGGA
Locus tag: Bxe_A1427
Name: pydC Funciton: Beta-ureidopropionase (EC 3.5.1.6)
Locus tag: Bxe_A1428
Name: pydX Funciton: Pyridine nucleotide-disulphide oxidoreductase associated with reductive pyrimidine catabolism
Locus tag: Bxe_A1429
Name: pydA Funciton: Dihydropyrimidine dehydrogenase [NADP+] (EC 1.3.1.2); Dihydroorotate dehydrogenase (EC 1.3.3.1)
Locus tag: Bxe_A1430
Name: pydP Funciton: Pyrimidine permease in reductive pathway
Locus tag: Bxe_A1431
Name: pydB Funciton: Dihydropyrimidinase (EC 3.5.2.2) |
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| pydC-pydX-pydA-pydP-pydB | -168 | 6.6 | ACCTGTCCAACTGGACAGGA | Bxe_A1427 |