Orthologous regulated operons containing ywoF gene

Properties
Regulog:	TnrA - Bacillales
Regulator type:	Transcription factor
Regulator family:	MerR
Regulation mode:	repressor (activator)
Biological process:	Nitrogen assimilation
Effector:	NrgB, ammonium uptake protein; NrgA, ammonium uptake protein; Feedback-inhibited GlnA, glutamine synthetase
Phylum:	Firmicutes

Built upon 304 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Bacillus licheniformis DSM 13
Position: -225 Score: 4.65709 Sequence: TTTTACATTATGTAACA Position: -215 Score: 3.60578 Sequence: TGTAACAAACTTTCAAA Position: -106 Score: 3.65907 Sequence: TTTAATATTTACTGATA Locus tag: BLi02096 Name: brnQ Funciton: Branched-chain amino acid transport system carrier protein Locus tag: BLi02095 Name: ywoF Funciton: Pectin lyase like protein
brnQ-ywoF	-225	4.7	TTTTACATTATGTAACA	BLi02096
	-215	3.6	TGTAACAAACTTTCAAA
	-106	3.7	TTTAATATTTACTGATA
Bacillus pumilus SAFR-032
Position: -121 Score: 5.0194 Sequence: TGTAAGATATTCTTTCA Locus tag: BPUM_3499 Name: ywoF Funciton: Pectin lyase like protein
ywoF	-121	5	TGTAAGATATTCTTTCA	BPUM_3499
Bacillus subtilis subsp. subtilis str. 168
Position: -78 Score: 4.32038 Sequence: AGTTATATTAAGTGACA Position: -66 Score: 3.70344 Sequence: TGACATCTAATGTCAAA Position: -56 Score: 4.30973 Sequence: TGTCAAAAAACATAACG Locus tag: BSU36470 Name: pucI Funciton: Allantoin permease Locus tag: BSU36460 Name: ywoF Funciton: Pectin lyase like protein
pucI-ywoF	-78	4.3	AGTTATATTAAGTGACA	BSU36470
	-66	3.7	TGACATCTAATGTCAAA
	-56	4.3	TGTCAAAAAACATAACG

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --