Orthologous regulated operons containing nrdB gene
| Regulog: | NrdR - Vibrionales |
| Regulator type: | Transcription factor |
| Regulator family: | NrdR |
| Regulation mode: | repressor |
| Biological process: | Deoxyribonucleotide biosynthesis |
| Effector: | Deoxyribonucleotides |
| Phylum: | Proteobacteria/gamma |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Photobacterium profundum SS9 | ||||
|
Position: -151
Score: 4.02254 Sequence: CATCACTATCTTGTAA
Position: -119
Score: 5.54988 Sequence: CCCCAATATGTAGTGT
Locus tag: PBPRA2459
Name: nrdA Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: PBPRA2460
Name: nrdB Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Locus tag: PBPRA2461
Name: yfaE Funciton: Ferredoxin |
||||
| nrdA-nrdB-yfaE | -151 | 4 | CATCACTATCTTGTAA | PBPRA2459 |
| -119 | 5.5 | CCCCAATATGTAGTGT | ||
| Vibrio angustum S14 | ||||
|
Position: -154
Score: 4.4389 Sequence: CACCACTATCTTGTAA
Position: -122
Score: 5.54988 Sequence: CCCCAATATGTAGTGT
Locus tag: VAS14_18479
Name: nrdA Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: VAS14_18474
Name: nrdB Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Locus tag: VAS14_18469
Name: yfaE Funciton: Ferredoxin |
||||
| nrdA-nrdB-yfaE | -154 | 4.4 | CACCACTATCTTGTAA | VAS14_18479 |
| -122 | 5.5 | CCCCAATATGTAGTGT | ||
| Vibrio cholerae O1 biovar eltor str. N16961 | ||||
|
Position: -124
Score: 5.35652 Sequence: CCCCTACATATAGTGT
Position: -103
Score: 4.38399 Sequence: ACACTATATGTAGGGC
Locus tag: VC1256
Name: nrdA Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: VC1255
Name: nrdB Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Locus tag: VC1254
Name: yfaE Funciton: Ferredoxin |
||||
| nrdA-nrdB-yfaE | -124 | 5.4 | CCCCTACATATAGTGT | VC1256 |
| -103 | 4.4 | ACACTATATGTAGGGC | ||
| Vibrio fischeri ES114 | ||||
|
Position: -144
Score: 3.51229 Sequence: AATCACTATCTTGTAG
Position: -113
Score: 5.12108 Sequence: GCCCTATATCTTGTGT
Locus tag: VF_1202
Name: nrdA Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: VF_1201
Name: nrdB Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) |
||||
| nrdA-nrdB | -144 | 3.5 | AATCACTATCTTGTAG | VF_1202 |
| -113 | 5.1 | GCCCTATATCTTGTGT | ||
| Vibrio harveyi ATCC BAA-1116 | ||||
|
Position: -133
Score: 5.55791 Sequence: CCCCTATATGTTGTGT
Position: -112
Score: 4.16736 Sequence: CTACAATATATAGATA
Locus tag: VIBHAR_02733
Name: nrdA Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: VIBHAR_02734
Name: nrdB Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Locus tag: VIBHAR_02735
Name: yfaE Funciton: Ferredoxin |
||||
| nrdA-nrdB-yfaE | -133 | 5.6 | CCCCTATATGTTGTGT | VIBHAR_02733 |
| -112 | 4.2 | CTACAATATATAGATA | ||
| Vibrio parahaemolyticus RIMD 2210633 | ||||
|
Position: -133
Score: 5.55791 Sequence: CCCCTATATGTTGTGT
Position: -112
Score: 4.16736 Sequence: CTACAATATATAGATA
Locus tag: VP1934
Name: nrdA Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: VP1935
Name: nrdB Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Locus tag: VP1936
Name: yfaE Funciton: Ferredoxin |
||||
| nrdA-nrdB-yfaE | -133 | 5.6 | CCCCTATATGTTGTGT | VP1934 |
| -112 | 4.2 | CTACAATATATAGATA | ||
| Vibrio salmonicida LFI1238 | ||||
|
Position: -153
Score: 4.17489 Sequence: AATCACTATCTTGTAT
Position: -122
Score: 5.53669 Sequence: CCCCTATATGTAGTGT
Locus tag: VSAL_I1769
Name: nrdA Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: VSAL_I1770
Name: nrdB Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) |
||||
| nrdA-nrdB | -153 | 4.2 | AATCACTATCTTGTAT | VSAL_I1769 |
| -122 | 5.5 | CCCCTATATGTAGTGT | ||
| Vibrio shilonii AK1 | ||||
|
Position: -156
Score: 3.7823 Sequence: TAGCACTATCTTGTAA
Position: -124
Score: 5.49675 Sequence: CCCCTATATCTTGTGT
Locus tag: VSAK1_01227
Name: nrdA Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: VSAK1_01222
Name: nrdB Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Locus tag: VSAK1_01217
Name: yfaE Funciton: Ferredoxin |
||||
| nrdA-nrdB-yfaE | -156 | 3.8 | TAGCACTATCTTGTAA | VSAK1_01227 |
| -124 | 5.5 | CCCCTATATCTTGTGT | ||
| Vibrio splendidus LGP32 | ||||
|
Position: -165
Score: 3.7823 Sequence: TAGCACTATCTTGTAA
Position: -133
Score: 5.55791 Sequence: CCCCTATATGTTGTGT
Locus tag: VS_1939
Name: nrdA Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: VS_1940
Name: nrdB Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Locus tag: VS_1941
Name: yfaE Funciton: Ferredoxin |
||||
| nrdA-nrdB-yfaE | -165 | 3.8 | TAGCACTATCTTGTAA | VS_1939 |
| -133 | 5.6 | CCCCTATATGTTGTGT | ||
| Vibrio vulnificus CMCP6 | ||||
|
Position: -134
Score: 5.55791 Sequence: CCCCTATATGTTGTGT
Position: -113
Score: 4.10801 Sequence: CTACAATATGTAGATA
Locus tag: VV1_3041
Name: nrdA Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: VV1_3042
Name: nrdB Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Locus tag: VV1_3043
Name: yfaE Funciton: Ferredoxin |
||||
| nrdA-nrdB-yfaE | -134 | 5.6 | CCCCTATATGTTGTGT | VV1_3041 |
| -113 | 4.1 | CTACAATATGTAGATA | ||