Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing nrdB gene

Properties
Regulog: NrdR - Vibrionales
Regulator type: Transcription factor
Regulator family: NrdR
Regulation mode: repressor
Biological process: Deoxyribonucleotide biosynthesis
Effector: Deoxyribonucleotides
Phylum: Proteobacteria/gamma
Built upon 40 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Photobacterium profundum SS9
Position: -151
Score: 4.02254
Sequence: CATCACTATCTTGTAA
Position: -119
Score: 5.54988
Sequence: CCCCAATATGTAGTGT
Locus tag: PBPRA2459
Name: nrdA
Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: PBPRA2460
Name: nrdB
Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Locus tag: PBPRA2461
Name: yfaE
Funciton: Ferredoxin
nrdA-nrdB-yfaE -151 4 CATCACTATCTTGTAA PBPRA2459
-119 5.5 CCCCAATATGTAGTGT
Vibrio angustum S14
Position: -154
Score: 4.4389
Sequence: CACCACTATCTTGTAA
Position: -122
Score: 5.54988
Sequence: CCCCAATATGTAGTGT
Locus tag: VAS14_18479
Name: nrdA
Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: VAS14_18474
Name: nrdB
Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Locus tag: VAS14_18469
Name: yfaE
Funciton: Ferredoxin
nrdA-nrdB-yfaE -154 4.4 CACCACTATCTTGTAA VAS14_18479
-122 5.5 CCCCAATATGTAGTGT
Vibrio cholerae O1 biovar eltor str. N16961
Position: -124
Score: 5.35652
Sequence: CCCCTACATATAGTGT
Position: -103
Score: 4.38399
Sequence: ACACTATATGTAGGGC
Locus tag: VC1256
Name: nrdA
Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: VC1255
Name: nrdB
Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Locus tag: VC1254
Name: yfaE
Funciton: Ferredoxin
nrdA-nrdB-yfaE -124 5.4 CCCCTACATATAGTGT VC1256
-103 4.4 ACACTATATGTAGGGC
Vibrio fischeri ES114
Position: -144
Score: 3.51229
Sequence: AATCACTATCTTGTAG
Position: -113
Score: 5.12108
Sequence: GCCCTATATCTTGTGT
Locus tag: VF_1202
Name: nrdA
Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: VF_1201
Name: nrdB
Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
nrdA-nrdB -144 3.5 AATCACTATCTTGTAG VF_1202
-113 5.1 GCCCTATATCTTGTGT
Vibrio harveyi ATCC BAA-1116
Position: -133
Score: 5.55791
Sequence: CCCCTATATGTTGTGT
Position: -112
Score: 4.16736
Sequence: CTACAATATATAGATA
Locus tag: VIBHAR_02733
Name: nrdA
Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: VIBHAR_02734
Name: nrdB
Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Locus tag: VIBHAR_02735
Name: yfaE
Funciton: Ferredoxin
nrdA-nrdB-yfaE -133 5.6 CCCCTATATGTTGTGT VIBHAR_02733
-112 4.2 CTACAATATATAGATA
Vibrio parahaemolyticus RIMD 2210633
Position: -133
Score: 5.55791
Sequence: CCCCTATATGTTGTGT
Position: -112
Score: 4.16736
Sequence: CTACAATATATAGATA
Locus tag: VP1934
Name: nrdA
Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: VP1935
Name: nrdB
Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Locus tag: VP1936
Name: yfaE
Funciton: Ferredoxin
nrdA-nrdB-yfaE -133 5.6 CCCCTATATGTTGTGT VP1934
-112 4.2 CTACAATATATAGATA
Vibrio salmonicida LFI1238
Position: -153
Score: 4.17489
Sequence: AATCACTATCTTGTAT
Position: -122
Score: 5.53669
Sequence: CCCCTATATGTAGTGT
Locus tag: VSAL_I1769
Name: nrdA
Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: VSAL_I1770
Name: nrdB
Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
nrdA-nrdB -153 4.2 AATCACTATCTTGTAT VSAL_I1769
-122 5.5 CCCCTATATGTAGTGT
Vibrio shilonii AK1
Position: -156
Score: 3.7823
Sequence: TAGCACTATCTTGTAA
Position: -124
Score: 5.49675
Sequence: CCCCTATATCTTGTGT
Locus tag: VSAK1_01227
Name: nrdA
Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: VSAK1_01222
Name: nrdB
Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Locus tag: VSAK1_01217
Name: yfaE
Funciton: Ferredoxin
nrdA-nrdB-yfaE -156 3.8 TAGCACTATCTTGTAA VSAK1_01227
-124 5.5 CCCCTATATCTTGTGT
Vibrio splendidus LGP32
Position: -165
Score: 3.7823
Sequence: TAGCACTATCTTGTAA
Position: -133
Score: 5.55791
Sequence: CCCCTATATGTTGTGT
Locus tag: VS_1939
Name: nrdA
Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: VS_1940
Name: nrdB
Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Locus tag: VS_1941
Name: yfaE
Funciton: Ferredoxin
nrdA-nrdB-yfaE -165 3.8 TAGCACTATCTTGTAA VS_1939
-133 5.6 CCCCTATATGTTGTGT
Vibrio vulnificus CMCP6
Position: -134
Score: 5.55791
Sequence: CCCCTATATGTTGTGT
Position: -113
Score: 4.10801
Sequence: CTACAATATGTAGATA
Locus tag: VV1_3041
Name: nrdA
Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: VV1_3042
Name: nrdB
Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Locus tag: VV1_3043
Name: yfaE
Funciton: Ferredoxin
nrdA-nrdB-yfaE -134 5.6 CCCCTATATGTTGTGT VV1_3041
-113 4.1 CTACAATATGTAGATA
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