Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing ptb gene

Properties
Regulog: BkdR - Bacillales
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode: activator
Biological process: Branched-chain amino acid degradation
Effector:
Phylum: Firmicutes
Built upon 26 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Anoxybacillus flavithermus WK1
Position: -117
Score: 5.21384
Sequence: TGCAAAAAGTTGCA
Locus tag: Aflv_0958
Name: ptb
Funciton: Phosphate butyryltransferase (EC 2.3.1.19)
Locus tag: Aflv_0959
Name: bcd
Funciton: Leucine dehydrogenase (EC 1.4.1.9)
Locus tag: Aflv_0960
Name: buk
Funciton: Butyrate kinase (EC 2.7.2.7)
Locus tag: Aflv_0961
Name: lpdV
Funciton: Branched-chain alpha-keto acid dehydrogenase E3 subunit (dihydrolipoamide dehydrogenase)
Locus tag: Aflv_0962
Name: bkdAA
Funciton: Branched-chain alpha-keto acid dehydrogenase E1 subunit (2-oxoisovalerate dehydrogenase alpha subunit)
Locus tag: Aflv_0963
Name: bkdAB
Funciton: Branched-chain alpha-keto acid dehydrogenase E1 subunit (2-oxoisovalerate dehydrogenase beta subunit)
Locus tag: Aflv_0964
Name: bkdB
Funciton: Branched-chain alpha-keto acid dehydrogenase E2 subunit (lipoamide acyltransferase)
ptb-bcd-buk-lpdV-bkdAA-bkdAB-bkdB -117 5.2 TGCAAAAAGTTGCA Aflv_0958
Bacillus amyloliquefaciens FZB42
Position: -130
Score: 5.82099
Sequence: TGCAATAAATTGCA
Locus tag: RBAM_022370
Name: ptb
Funciton: Phosphate butyryltransferase (EC 2.3.1.19)
Locus tag: RBAM_022360
Name: bcd
Funciton: Leucine dehydrogenase (EC 1.4.1.9)
Locus tag: RBAM_022350
Name: buk
Funciton: Butyrate kinase (EC 2.7.2.7)
Locus tag: RBAM_022340
Name: lpdV
Funciton: Branched-chain alpha-keto acid dehydrogenase E3 subunit (dihydrolipoamide dehydrogenase)
Locus tag: RBAM_022330
Name: bkdAA
Funciton: Branched-chain alpha-keto acid dehydrogenase E1 subunit (2-oxoisovalerate dehydrogenase alpha subunit)
Locus tag: RBAM_022320
Name: bkdAB
Funciton: Branched-chain alpha-keto acid dehydrogenase E1 subunit (2-oxoisovalerate dehydrogenase beta subunit)
Locus tag: RBAM_022310
Name: bkdB
Funciton: Branched-chain alpha-keto acid dehydrogenase E2 subunit (lipoamide acyltransferase)
ptb-bcd-buk-lpdV-bkdAA-bkdAB-bkdB -130 5.8 TGCAATAAATTGCA RBAM_022370
Bacillus cereus ATCC 14579
Position: -217
Score: 4.94168
Sequence: TGCAAAAAATAGCA
Position: -203
Score: 5.38331
Sequence: TGCAATAAATTGCG
Position: -184
Score: 5.82099
Sequence: TGCAATTTATTGCA
Locus tag: BC4163
Name: ptb
Funciton: Phosphate butyryltransferase (EC 2.3.1.19)
Locus tag: BC4162
Name: bcd
Funciton: Leucine dehydrogenase (EC 1.4.1.9)
Locus tag: BC4161
Name: buk
Funciton: Butyrate kinase (EC 2.7.2.7)
Locus tag: BC4160
Name: lpdV
Funciton: Branched-chain alpha-keto acid dehydrogenase E3 subunit (dihydrolipoamide dehydrogenase)
Locus tag: BC4159
Name: bkdAA
Funciton: Branched-chain alpha-keto acid dehydrogenase E1 subunit (2-oxoisovalerate dehydrogenase alpha subunit)
Locus tag: BC4158
Name: bkdAB
Funciton: Branched-chain alpha-keto acid dehydrogenase E1 subunit (2-oxoisovalerate dehydrogenase beta subunit)
Locus tag: BC4157
Name: bkdB
Funciton: Branched-chain alpha-keto acid dehydrogenase E2 subunit (lipoamide acyltransferase)
ptb-bcd-buk-lpdV-bkdAA-bkdAB-bkdB -217 4.9 TGCAAAAAATAGCA BC4163
-203 5.4 TGCAATAAATTGCG
-184 5.8 TGCAATTTATTGCA
Bacillus licheniformis DSM 13
Position: -134
Score: 5.82099
Sequence: TGCAATAAATTGCA
Position: -112
Score: 4.56903
Sequence: TGCAAAATCATGCA
Locus tag: BLi02586
Name: ptb
Funciton: Phosphate butyryltransferase (EC 2.3.1.19)
Locus tag: BLi02585
Name: bcd
Funciton: Leucine dehydrogenase (EC 1.4.1.9)
Locus tag: BLi02584
Name: buk
Funciton: Butyrate kinase (EC 2.7.2.7)
Locus tag: BLi02583
Name: lpdV
Funciton: Branched-chain alpha-keto acid dehydrogenase E3 subunit (dihydrolipoamide dehydrogenase)
Locus tag: BLi02582
Name: bkdAA
Funciton: Branched-chain alpha-keto acid dehydrogenase E1 subunit (2-oxoisovalerate dehydrogenase alpha subunit)
Locus tag: BLi02581
Name: bkdAB
Funciton: Branched-chain alpha-keto acid dehydrogenase E1 subunit (2-oxoisovalerate dehydrogenase beta subunit)
Locus tag: BLi02580
Name: bkdB
Funciton: Branched-chain alpha-keto acid dehydrogenase E2 subunit (lipoamide acyltransferase)
ptb-bcd-buk-lpdV-bkdAA-bkdAB-bkdB -134 5.8 TGCAATAAATTGCA BLi02586
-112 4.6 TGCAAAATCATGCA
Bacillus pumilus SAFR-032
Position: -134
Score: 5.38331
Sequence: TGCAATAAAATGCA
Position: -113
Score: 4.77616
Sequence: TGCAAAAAGTTGCG
Locus tag: BPUM_2148
Name: ptb
Funciton: Phosphate butyryltransferase (EC 2.3.1.19)
Locus tag: BPUM_2147
Name: bcd
Funciton: Leucine dehydrogenase (EC 1.4.1.9)
Locus tag: BPUM_2146
Name: buk
Funciton: Butyrate kinase (EC 2.7.2.7)
Locus tag: BPUM_2145
Name: lpdV
Funciton: Branched-chain alpha-keto acid dehydrogenase E3 subunit (dihydrolipoamide dehydrogenase)
Locus tag: BPUM_2144
Name: bkdAA
Funciton: Branched-chain alpha-keto acid dehydrogenase E1 subunit (2-oxoisovalerate dehydrogenase alpha subunit)
Locus tag: BPUM_2143
Name: bkdAB
Funciton: Branched-chain alpha-keto acid dehydrogenase E1 subunit (2-oxoisovalerate dehydrogenase beta subunit)
Locus tag: BPUM_2142
Name: bkdB
Funciton: Branched-chain alpha-keto acid dehydrogenase E2 subunit (lipoamide acyltransferase)
ptb-bcd-buk-lpdV-bkdAA-bkdAB-bkdB -134 5.4 TGCAATAAAATGCA BPUM_2148
-113 4.8 TGCAAAAAGTTGCG
Bacillus subtilis subsp. subtilis str. 168
Position: -132
Score: 5.60089
Sequence: TGCAATAATTTGCA
Locus tag: BSU24090
Name: ptb
Funciton: Phosphate butyryltransferase (EC 2.3.1.19)
Locus tag: BSU24080
Name: bcd
Funciton: Leucine dehydrogenase (EC 1.4.1.9)
Locus tag: BSU24070
Name: buk
Funciton: Butyrate kinase (EC 2.7.2.7)
Locus tag: BSU24060
Name: lpdV
Funciton: Branched-chain alpha-keto acid dehydrogenase E3 subunit (dihydrolipoamide dehydrogenase)
Locus tag: BSU24050
Name: bkdAA
Funciton: Branched-chain alpha-keto acid dehydrogenase E1 subunit (2-oxoisovalerate dehydrogenase alpha subunit)
Locus tag: BSU24040
Name: bkdAB
Funciton: Branched-chain alpha-keto acid dehydrogenase E1 subunit (2-oxoisovalerate dehydrogenase beta subunit)
Locus tag: BSU24030
Name: bkdB
Funciton: Branched-chain alpha-keto acid dehydrogenase E2 subunit (lipoamide acyltransferase)
ptb-bcd-buk-lpdV-bkdAA-bkdAB-bkdB -132 5.6 TGCAATAATTTGCA BSU24090
Geobacillus kaustophilus HTA426
Position: -148
Score: 5.16322
Sequence: TGCAATAATTTGCG
Locus tag: GK2382
Name: ptb
Funciton: Phosphate butyryltransferase (EC 2.3.1.19)
Locus tag: GK2381
Name: bcd
Funciton: Leucine dehydrogenase (EC 1.4.1.9)
Locus tag: GK2380
Name: buk
Funciton: Butyrate kinase (EC 2.7.2.7)
Locus tag: GK2379
Name: lpdV
Funciton: Branched-chain alpha-keto acid dehydrogenase E3 subunit (dihydrolipoamide dehydrogenase)
Locus tag: GK2378
Name: bkdAA
Funciton: Branched-chain alpha-keto acid dehydrogenase E1 subunit (2-oxoisovalerate dehydrogenase alpha subunit)
Locus tag: GK2377
Name: bkdAB
Funciton: Branched-chain alpha-keto acid dehydrogenase E1 subunit (2-oxoisovalerate dehydrogenase beta subunit)
Locus tag: GK2376
Name: bkdB
Funciton: Branched-chain alpha-keto acid dehydrogenase E2 subunit (lipoamide acyltransferase)
ptb-bcd-buk-lpdV-bkdAA-bkdAB-bkdB -148 5.2 TGCAATAATTTGCG GK2382
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