Orthologous regulated operons containing ddpB gene
Regulog: | NtrC - Enterobacteriales |
Regulator type: | Transcription factor |
Regulator family: | Fis |
Regulation mode: | activator (repressor) |
Biological process: | Nitrogen assimilation |
Effector: | Phosphorylated NtrB, signal histidine kinase |
Phylum: | Proteobacteria/gamma |
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Operon | Position | Score | Sequence | Locus Tag of the First Gene |
---|---|---|---|---|
Citrobacter koseri ATCC BAA-895 | ||||
Position: -151
Score: 3.53596 Sequence: TGCACAAATGTTGATCA
Locus tag: CKO_01526
Name: CKO_01526 Funciton: Predicted transcriptional regulator, RpiR family
Locus tag: CKO_01525
Name: ddpX Funciton: D-alanyl-D-alanine dipeptidase (EC 3.4.13.-)
Locus tag: CKO_01524
Name: ddpA Funciton: Dipeptide ABC transporter, substrate-binding component (TC 3.A.1.5.2)
Locus tag: CKO_01523
Name: ddpB Funciton: Dipeptide ABC transporter, transmembrane component 1 (TC 3.A.1.5.2)
Locus tag: CKO_01522
Name: ddpC Funciton: Dipeptide ABC transporter, transmembrane component 2 (TC 3.A.1.5.2)
Locus tag: CKO_01521
Name: ddpD Funciton: Dipeptide ABC transporter, transmembrane component 3 (TC 3.A.1.5.2)
Locus tag: CKO_01520
Name: ddpF Funciton: Dipeptide ABC transporter, ABC-binding component (TC 3.A.1.5.2) |
||||
CKO_01526-ddpX-ddpA-ddpB-ddpC-ddpD-ddpF | -151 | 3.5 | TGCACAAATGTTGATCA | CKO_01526 |
Escherichia coli str. K-12 substr. MG1655 | ||||
Position: -148
Score: 4.067 Sequence: TGCACCAAAACTGCACT
Position: -127
Score: 3.53596 Sequence: TGCACAAATGTTGATCA
Locus tag: b1488
Name: ddpX Funciton: D-alanyl-D-alanine dipeptidase (EC 3.4.13.-)
Locus tag: b1487
Name: ddpA Funciton: Dipeptide ABC transporter, substrate-binding component (TC 3.A.1.5.2)
Locus tag: b1486
Name: ddpB Funciton: Dipeptide ABC transporter, transmembrane component 1 (TC 3.A.1.5.2)
Locus tag: b1485
Name: ddpC Funciton: Dipeptide ABC transporter, transmembrane component 2 (TC 3.A.1.5.2)
Locus tag: b1484
Name: ddpD Funciton: Dipeptide ABC transporter, transmembrane component 3 (TC 3.A.1.5.2)
Locus tag: b1483
Name: ddpF Funciton: Dipeptide ABC transporter, ABC-binding component (TC 3.A.1.5.2) |
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ddpX-ddpA-ddpB-ddpC-ddpD-ddpF | -148 | 4.1 | TGCACCAAAACTGCACT | b1488 |
-127 | 3.5 | TGCACAAATGTTGATCA | ||
Serratia proteamaculans 568 | ||||
Position: -204
Score: 4.35283 Sequence: TGCCCAATTGTTGTGCA
Locus tag: Spro_2345
Name: CKO_01526 Funciton: Predicted transcriptional regulator, RpiR family
Locus tag: Spro_2346
Name: ddpX Funciton: D-alanyl-D-alanine dipeptidase (EC 3.4.13.-)
Locus tag: Spro_2347
Name: ddpA Funciton: Dipeptide ABC transporter, substrate-binding component (TC 3.A.1.5.2)
Locus tag: Spro_2348
Name: ddpB Funciton: Dipeptide ABC transporter, transmembrane component 1 (TC 3.A.1.5.2)
Locus tag: Spro_2349
Name: ddpC Funciton: Dipeptide ABC transporter, transmembrane component 2 (TC 3.A.1.5.2)
Locus tag: Spro_2350
Name: ddpD Funciton: Dipeptide ABC transporter, transmembrane component 3 (TC 3.A.1.5.2)
Locus tag: Spro_2351
Name: ddpF Funciton: Dipeptide ABC transporter, ABC-binding component (TC 3.A.1.5.2) |
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CKO_01526-ddpX-ddpA-ddpB-ddpC-ddpD-ddpF | -204 | 4.4 | TGCCCAATTGTTGTGCA | Spro_2345 |