Orthologous regulated operons containing pdhD gene
| Regulog: | CcpA - Lactobacillaceae |
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | |
| Biological process: | Carbon catabolism |
| Effector: | HPr, phosphocarrier protein; Fructose-1,6-bisphosphate |
| Phylum: | Firmicutes |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Lactobacillus brevis ATCC 367 | ||||
|
Position: -117
Score: 4.39008 Sequence: ATGAAAGGGCTTGCAA
Locus tag: LVIS_1410
Name: pdhA Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component alpha-subunit
Locus tag: LVIS_1409
Name: pdhB Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component beta-subunit
Locus tag: LVIS_1408
Name: pdhC Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E2 component
Locus tag: LVIS_1407
Name: pdhD Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E3 component |
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| pdhA-pdhB-pdhC-pdhD | -117 | 4.4 | ATGAAAGGGCTTGCAA | LVIS_1410 |
| Lactobacillus casei ATCC 334 | ||||
|
Position: -111
Score: 4.17523 Sequence: AATAAAACGCTTGCAA
Position: -68
Score: 4.07916 Sequence: TTGTAAAGATTTTCAT
Locus tag: LSEI_1305
Name: pdhA Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component alpha-subunit
Locus tag: LSEI_1306
Name: pdhB Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component beta-subunit
Locus tag: LSEI_1307
Name: pdhC Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E2 component
Locus tag: LSEI_1308
Name: pdhD Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E3 component |
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| pdhA-pdhB-pdhC-pdhD | -111 | 4.2 | AATAAAACGCTTGCAA | LSEI_1305 |
| -68 | 4.1 | TTGTAAAGATTTTCAT | ||
| Lactobacillus fermentum IFO 3956 | ||||
|
Position: -244
Score: 4.24913 Sequence: ATGTAACGGCTTTCTT
Position: -169
Score: 4.51989 Sequence: ATGTAAGCGGTAACTT
Locus tag: LAF_1140
Name: pdhA Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component alpha-subunit
Locus tag: LAF_1139
Name: pdhB Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component beta-subunit
Locus tag: LAF_1138
Name: pdhC Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E2 component
Locus tag: LAF_1137
Name: pdhD Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E3 component
Locus tag: LAF_1136
Name: lplA1 Funciton: Lipoate-protein ligase A |
||||
| pdhA-pdhB-pdhC-pdhD-lplA1 | -244 | 4.2 | ATGTAACGGCTTTCTT | LAF_1140 |
| -169 | 4.5 | ATGTAAGCGGTAACTT | ||
| Lactobacillus plantarum WCFS1 | ||||
|
Position: -118
Score: 4.12398 Sequence: TTGGAAGGGCTTGCAA
Position: -67
Score: 4.5001 Sequence: ATGAAAACGATTACGA
Locus tag: lp_2154
Name: pdhA Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component alpha-subunit
Locus tag: lp_2153
Name: pdhB Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component beta-subunit
Locus tag: lp_2152
Name: pdhC Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E2 component
Locus tag: lp_2151
Name: pdhD Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E3 component |
||||
| pdhA-pdhB-pdhC-pdhD | -118 | 4.1 | TTGGAAGGGCTTGCAA | lp_2154 |
| -67 | 4.5 | ATGAAAACGATTACGA | ||
| Lactobacillus reuteri JCM 1112 | ||||
|
Position: -90
Score: 4.67033 Sequence: ATGAAAGCGCTTGTAT
Position: -40
Score: 4.33338 Sequence: AAGCAATCGCTTACAT
Locus tag: LAR_0608
Name: pdhA Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component alpha-subunit
Locus tag: LAR_0609
Name: pdhB Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component beta-subunit
Locus tag: LAR_0610
Name: pdhC Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E2 component
Locus tag: LAR_0611
Name: pdhD Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E3 component |
||||
| pdhA-pdhB-pdhC-pdhD | -90 | 4.7 | ATGAAAGCGCTTGTAT | LAR_0608 |
| -40 | 4.3 | AAGCAATCGCTTACAT | ||
| Lactobacillus rhamnosus GG | ||||
|
Position: -111
Score: 4.17523 Sequence: AATAAAACGCTTGCAA
Locus tag: LGG_01320
Name: pdhA Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component alpha-subunit
Locus tag: LGG_01321
Name: pdhB Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component beta-subunit
Locus tag: LGG_01322
Name: pdhC Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E2 component
Locus tag: LGG_01323
Name: pdhD Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E3 component |
||||
| pdhA-pdhB-pdhC-pdhD | -111 | 4.2 | AATAAAACGCTTGCAA | LGG_01320 |
| Lactobacillus sakei subsp. sakei 23K | ||||
|
Position: -115
Score: 4.02844 Sequence: TGTAAAACGCTTGCAT
Locus tag: LSA1085
Name: pdhA Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component alpha-subunit
Locus tag: LSA1084
Name: pdhB Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component beta-subunit
Locus tag: LSA1083
Name: pdhC Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E2 component
Locus tag: LSA1082
Name: pdhD Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E3 component |
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| pdhA-pdhB-pdhC-pdhD | -115 | 4 | TGTAAAACGCTTGCAT | LSA1085 |
| Lactobacillus salivarius subsp. salivarius UCC118 | ||||
|
Position: -216
Score: 4.01509 Sequence: GTGATAACGATAACAA
Position: -67
Score: 4.45322 Sequence: TTGTAAGCGTTATATA
Locus tag: LSL_0153
Name: pdhA Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component alpha-subunit
Locus tag: LSL_0154
Name: pdhB Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component beta-subunit
Locus tag: LSL_0155
Name: pdhC Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E2 component
Locus tag: LSL_0156
Name: pdhD Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E3 component
Locus tag: LSL_0157
Name: lplA1 Funciton: Lipoate-protein ligase A |
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| pdhA-pdhB-pdhC-pdhD-lplA1 | -216 | 4 | GTGATAACGATAACAA | LSL_0153 |
| -67 | 4.5 | TTGTAAGCGTTATATA | ||
| Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 | ||||
|
Position: -31
Score: 4.86519 Sequence: GTGTAAGCGGTTACAA
Locus tag: LEUM_0736
Name: lplA1 Funciton: Lipoate-protein ligase A
Locus tag: LEUM_0737
Name: pdhA Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component alpha-subunit
Locus tag: LEUM_0738
Name: pdhB Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component beta-subunit
Locus tag: LEUM_0739
Name: pdhC Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E2 component
Locus tag: LEUM_0740
Name: pdhD Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E3 component |
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| lplA1-pdhA-pdhB-pdhC-pdhD | -31 | 4.9 | GTGTAAGCGGTTACAA | LEUM_0736 |
| Oenococcus oeni PSU-1 | ||||
|
Position: -53
Score: 5.11008 Sequence: TTGAAAGCGCTTACAG
Locus tag: OEOE_0327
Name: lplA1 Funciton: Lipoate-protein ligase A
Locus tag: OEOE_0328
Name: pdhA Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component alpha-subunit
Locus tag: OEOE_0329
Name: pdhB Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component beta-subunit
Locus tag: OEOE_0330
Name: pdhC Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E2 component
Locus tag: OEOE_0331
Name: pdhD Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E3 component |
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| lplA1-pdhA-pdhB-pdhC-pdhD | -53 | 5.1 | TTGAAAGCGCTTACAG | OEOE_0327 |
| Pediococcus pentosaceus ATCC 25745 | ||||
|
Position: -107
Score: 4.01244 Sequence: TTTAAAACATTTTAAA
Position: -40
Score: 4.82005 Sequence: TAGAAAGCGCTTCCAT
Locus tag: PEPE_1774
Name: lplA1 Funciton: Lipoate-protein ligase A
Locus tag: PEPE_1773
Name: pdhA Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component alpha-subunit
Locus tag: PEPE_1772
Name: pdhB Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component beta-subunit
Locus tag: PEPE_1771
Name: pdhC Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E2 component
Locus tag: PEPE_1770
Name: pdhD Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E3 component |
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| lplA1-pdhA-pdhB-pdhC-pdhD | -107 | 4 | TTTAAAACATTTTAAA | PEPE_1774 |
| -40 | 4.8 | TAGAAAGCGCTTCCAT | ||