Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing pdhC gene

Properties
Regulog: CcpA - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode:
Biological process: Carbon catabolism
Effector: HPr, phosphocarrier protein; Fructose-1,6-bisphosphate
Phylum: Firmicutes
Built upon 561 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Lactobacillus brevis ATCC 367
Position: -117
Score: 4.39008
Sequence: ATGAAAGGGCTTGCAA
Locus tag: LVIS_1410
Name: pdhA
Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component alpha-subunit
Locus tag: LVIS_1409
Name: pdhB
Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component beta-subunit
Locus tag: LVIS_1408
Name: pdhC
Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E2 component
Locus tag: LVIS_1407
Name: pdhD
Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E3 component
pdhA-pdhB-pdhC-pdhD -117 4.4 ATGAAAGGGCTTGCAA LVIS_1410
Lactobacillus casei ATCC 334
Position: -111
Score: 4.17523
Sequence: AATAAAACGCTTGCAA
Position: -68
Score: 4.07916
Sequence: TTGTAAAGATTTTCAT
Locus tag: LSEI_1305
Name: pdhA
Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component alpha-subunit
Locus tag: LSEI_1306
Name: pdhB
Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component beta-subunit
Locus tag: LSEI_1307
Name: pdhC
Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E2 component
Locus tag: LSEI_1308
Name: pdhD
Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E3 component
pdhA-pdhB-pdhC-pdhD -111 4.2 AATAAAACGCTTGCAA LSEI_1305
-68 4.1 TTGTAAAGATTTTCAT
Lactobacillus fermentum IFO 3956
Position: -244
Score: 4.24913
Sequence: ATGTAACGGCTTTCTT
Position: -169
Score: 4.51989
Sequence: ATGTAAGCGGTAACTT
Locus tag: LAF_1140
Name: pdhA
Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component alpha-subunit
Locus tag: LAF_1139
Name: pdhB
Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component beta-subunit
Locus tag: LAF_1138
Name: pdhC
Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E2 component
Locus tag: LAF_1137
Name: pdhD
Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E3 component
Locus tag: LAF_1136
Name: lplA1
Funciton: Lipoate-protein ligase A
pdhA-pdhB-pdhC-pdhD-lplA1 -244 4.2 ATGTAACGGCTTTCTT LAF_1140
-169 4.5 ATGTAAGCGGTAACTT
Lactobacillus plantarum WCFS1
Position: -118
Score: 4.12398
Sequence: TTGGAAGGGCTTGCAA
Position: -67
Score: 4.5001
Sequence: ATGAAAACGATTACGA
Locus tag: lp_2154
Name: pdhA
Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component alpha-subunit
Locus tag: lp_2153
Name: pdhB
Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component beta-subunit
Locus tag: lp_2152
Name: pdhC
Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E2 component
Locus tag: lp_2151
Name: pdhD
Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E3 component
pdhA-pdhB-pdhC-pdhD -118 4.1 TTGGAAGGGCTTGCAA lp_2154
-67 4.5 ATGAAAACGATTACGA
Lactobacillus reuteri JCM 1112
Position: -90
Score: 4.67033
Sequence: ATGAAAGCGCTTGTAT
Position: -40
Score: 4.33338
Sequence: AAGCAATCGCTTACAT
Locus tag: LAR_0608
Name: pdhA
Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component alpha-subunit
Locus tag: LAR_0609
Name: pdhB
Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component beta-subunit
Locus tag: LAR_0610
Name: pdhC
Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E2 component
Locus tag: LAR_0611
Name: pdhD
Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E3 component
pdhA-pdhB-pdhC-pdhD -90 4.7 ATGAAAGCGCTTGTAT LAR_0608
-40 4.3 AAGCAATCGCTTACAT
Lactobacillus rhamnosus GG
Position: -111
Score: 4.17523
Sequence: AATAAAACGCTTGCAA
Locus tag: LGG_01320
Name: pdhA
Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component alpha-subunit
Locus tag: LGG_01321
Name: pdhB
Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component beta-subunit
Locus tag: LGG_01322
Name: pdhC
Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E2 component
Locus tag: LGG_01323
Name: pdhD
Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E3 component
pdhA-pdhB-pdhC-pdhD -111 4.2 AATAAAACGCTTGCAA LGG_01320
Lactobacillus sakei subsp. sakei 23K
Position: -115
Score: 4.02844
Sequence: TGTAAAACGCTTGCAT
Locus tag: LSA1085
Name: pdhA
Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component alpha-subunit
Locus tag: LSA1084
Name: pdhB
Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component beta-subunit
Locus tag: LSA1083
Name: pdhC
Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E2 component
Locus tag: LSA1082
Name: pdhD
Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E3 component
pdhA-pdhB-pdhC-pdhD -115 4 TGTAAAACGCTTGCAT LSA1085
Lactobacillus salivarius subsp. salivarius UCC118
Position: -216
Score: 4.01509
Sequence: GTGATAACGATAACAA
Position: -67
Score: 4.45322
Sequence: TTGTAAGCGTTATATA
Locus tag: LSL_0153
Name: pdhA
Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component alpha-subunit
Locus tag: LSL_0154
Name: pdhB
Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component beta-subunit
Locus tag: LSL_0155
Name: pdhC
Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E2 component
Locus tag: LSL_0156
Name: pdhD
Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E3 component
Locus tag: LSL_0157
Name: lplA1
Funciton: Lipoate-protein ligase A
pdhA-pdhB-pdhC-pdhD-lplA1 -216 4 GTGATAACGATAACAA LSL_0153
-67 4.5 TTGTAAGCGTTATATA
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293
Position: -31
Score: 4.86519
Sequence: GTGTAAGCGGTTACAA
Locus tag: LEUM_0736
Name: lplA1
Funciton: Lipoate-protein ligase A
Locus tag: LEUM_0737
Name: pdhA
Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component alpha-subunit
Locus tag: LEUM_0738
Name: pdhB
Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component beta-subunit
Locus tag: LEUM_0739
Name: pdhC
Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E2 component
Locus tag: LEUM_0740
Name: pdhD
Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E3 component
lplA1-pdhA-pdhB-pdhC-pdhD -31 4.9 GTGTAAGCGGTTACAA LEUM_0736
Oenococcus oeni PSU-1
Position: -53
Score: 5.11008
Sequence: TTGAAAGCGCTTACAG
Locus tag: OEOE_0327
Name: lplA1
Funciton: Lipoate-protein ligase A
Locus tag: OEOE_0328
Name: pdhA
Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component alpha-subunit
Locus tag: OEOE_0329
Name: pdhB
Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component beta-subunit
Locus tag: OEOE_0330
Name: pdhC
Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E2 component
Locus tag: OEOE_0331
Name: pdhD
Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E3 component
lplA1-pdhA-pdhB-pdhC-pdhD -53 5.1 TTGAAAGCGCTTACAG OEOE_0327
Pediococcus pentosaceus ATCC 25745
Position: -107
Score: 4.01244
Sequence: TTTAAAACATTTTAAA
Position: -40
Score: 4.82005
Sequence: TAGAAAGCGCTTCCAT
Locus tag: PEPE_1774
Name: lplA1
Funciton: Lipoate-protein ligase A
Locus tag: PEPE_1773
Name: pdhA
Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component alpha-subunit
Locus tag: PEPE_1772
Name: pdhB
Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component beta-subunit
Locus tag: PEPE_1771
Name: pdhC
Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E2 component
Locus tag: PEPE_1770
Name: pdhD
Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E3 component
lplA1-pdhA-pdhB-pdhC-pdhD -107 4 TTTAAAACATTTTAAA PEPE_1774
-40 4.8 TAGAAAGCGCTTCCAT
© 2009-2020 RegPrecise