Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing bioB gene

Properties
Regulog: BirA - Oceanospirillales/Alteromonadales
Regulator type: Transcription factor
Regulator family: BirA
Regulation mode: repressor
Biological process: Biotin biosynthesis
Effector: Biotin
Phylum: Proteobacteria/gamma
Built upon 26 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Alcanivorax borkumensis SK2
Position: -83
Score: 7.88985
Sequence: CAGTAAACT-(16)-GGTTGACAG
Locus tag: ABO_2220
Name: bioB
Funciton: Biotin synthase (EC 2.8.1.6)
Locus tag: ABO_2219
Name: bioF
Funciton: 8-amino-7-oxononanoate synthase (EC 2.3.1.47)
Locus tag: ABO_2218
Name: bioH
Funciton: Biotin synthesis protein BioH
Locus tag: ABO_2217
Name: bioC
Funciton: Biotin synthesis protein BioC
Locus tag: ABO_2216
Name: bioD
Funciton: Dethiobiotin synthetase (EC 6.3.3.3)
bioB-bioF-bioH-bioC-bioD -83 7.9 CAGTAAACT-(16)-GGTTGACAG ABO_2220
Cellvibrio japonicus Ueda107
Position: -63
Score: 8.46171
Sequence: TAGTAAACC-(15)-GGTTGACAG
Locus tag: CJA_0426
Name: bioB
Funciton: Biotin synthase (EC 2.8.1.6)
Locus tag: CJA_0427
Name: bioF
Funciton: 8-amino-7-oxononanoate synthase
Locus tag: CJA_0428
Name: bioHC
Funciton: Biotin synthesis protein BioH / Biotin synthesis protein BioC
Locus tag: CJA_0429
Name: bioD
Funciton: Dethiobiotin synthetase (EC 6.3.3.3)
bioB-bioF-bioHC-bioD -63 8.5 TAGTAAACC-(15)-GGTTGACAG CJA_0426
Chromohalobacter salexigens DSM 3043
Position: -102
Score: 8.84478
Sequence: TTGTCAACC-(15)-GGTTGACAT
Position: -46
Score: 7.31199
Sequence: TGGTCAACC-(14)-AGTTGACCA
Locus tag: Csal_1167
Name: bioB
Funciton: Biotin synthase (EC 2.8.1.6)
Locus tag: Csal_1166
Name: null
Funciton: 8-amino-7-oxononanoate synthase (EC 2.3.1.47)
Locus tag: Csal_1165
Name: bioH
Funciton: Biotin synthesis protein BioH
Locus tag: Csal_1164
Name: bioC
Funciton: Biotin synthesis protein BioC
Locus tag: Csal_1163
Name: bioD
Funciton: Dethiobiotin synthetase (EC 6.3.3.3)
Locus tag: Csal_1162
Name: bioA
Funciton: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)
bioB-Csal_1166-bioH-bioC-bioD-bioA -102 8.8 TTGTCAACC-(15)-GGTTGACAT Csal_1167
-46 7.3 TGGTCAACC-(14)-AGTTGACCA
Hahella chejuensis KCTC 2396
Position: -164
Score: 8.07255
Sequence: CTGTTAACC-(14)-GGTTGACAG
Locus tag: HCH_05371
Name: bioB
Funciton: Biotin synthase (EC 2.8.1.6)
Locus tag: HCH_05370
Name: bioF
Funciton: 8-amino-7-oxononanoate synthase (EC 2.3.1.47)
Locus tag: HCH_05369
Name: bioH
Funciton: Biotin synthesis protein BioH
Locus tag: HCH_05368
Name: bioC
Funciton: Biotin synthesis protein BioC
Locus tag: HCH_05366
Name: bioD
Funciton: Dethiobiotin synthetase (EC 6.3.3.3)
bioB-bioF-bioH-bioC-bioD -164 8.1 CTGTTAACC-(14)-GGTTGACAG HCH_05371
Marinobacter aqueolei
Position: -104
Score: 8.07255
Sequence: CTGTTAACC-(14)-GGTTGACAG
Position: -41
Score: 7.54231
Sequence: CCGTAAACC-(14)-GGTTAACAG
Locus tag: Maqu_2756
Name: bioB
Funciton: Biotin synthase (EC 2.8.1.6)
Locus tag: Maqu_2755
Name: null
Funciton: 8-amino-7-oxononanoate synthase (EC 2.3.1.47)
Locus tag: Maqu_2754
Name: bioC
Funciton: Biotin synthesis protein BioC
Locus tag: Maqu_2753
Name: bioD
Funciton: Dethiobiotin synthetase (EC 6.3.3.3)
bioB-Maqu_2755-bioC-bioD -104 8.1 CTGTTAACC-(14)-GGTTGACAG Maqu_2756
-41 7.5 CCGTAAACC-(14)-GGTTAACAG
Marinobacter sp. ELB17
Position: -102
Score: 8.07255
Sequence: CTGTTAACC-(14)-GGTTGACAG
Position: -40
Score: 7.54231
Sequence: CCGTAAACC-(14)-GGTTAACAG
Locus tag: MELB17_06979
Name: bioB
Funciton: Biotin synthase (EC 2.8.1.6)
Locus tag: MELB17_06984
Name: null
Funciton: 8-amino-7-oxononanoate synthase
Locus tag: MELB17_06989
Name: bioH
Funciton: Biotin synthesis protein BioH
Locus tag: MELB17_06994
Name: bioC
Funciton: Biotin synthesis protein BioC
Locus tag: MELB17_06999
Name: bioD
Funciton: Dethiobiotin synthetase (EC 6.3.3.3)
bioB-MELB17_06984-bioH-bioC-bioD -102 8.1 CTGTTAACC-(14)-GGTTGACAG MELB17_06979
-40 7.5 CCGTAAACC-(14)-GGTTAACAG
Marinomonas sp. MWYL1
Position: -85
Score: 8.37218
Sequence: TTGTAAACC-(14)-TGTTGACAG
Locus tag: Mmwyl1_3457
Name: bioB
Funciton: Biotin synthase (EC 2.8.1.6)
Locus tag: Mmwyl1_3456
Name: null
Funciton: 8-amino-7-oxononanoate synthase (EC 2.3.1.47)
Locus tag: Mmwyl1_3455
Name: bioH
Funciton: Biotin synthesis protein BioH
Locus tag: Mmwyl1_3454
Name: bioC
Funciton: Biotin synthesis protein BioC
Locus tag: Mmwyl1_3453
Name: bioD
Funciton: Dethiobiotin synthetase (EC 6.3.3.3)
bioB-Mmwyl1_3456-bioH-bioC-bioD -85 8.4 TTGTAAACC-(14)-TGTTGACAG Mmwyl1_3457
Oceanobacter sp. RED65
Position: -152
Score: 8.31812
Sequence: CTGTAAACC-(14)-GGTTGACTG
Locus tag: RED65_04570
Name: bioB
Funciton: Biotin synthase (EC 2.8.1.6)
Locus tag: RED65_04565
Name: null
Funciton: 8-amino-7-oxononanoate synthase
Locus tag: RED65_04560
Name: bioH
Funciton: Biotin synthesis protein BioH
Locus tag: RED65_04555
Name: bioC
Funciton: Biotin synthesis protein BioC
Locus tag: RED65_04550
Name: bioD
Funciton: Dethiobiotin synthetase (EC 6.3.3.3)
bioB-RED65_04565-bioH-bioC-bioD -152 8.3 CTGTAAACC-(14)-GGTTGACTG RED65_04570
Reinekea sp. MED297
Position: -83
Score: 6.77442
Sequence: ATGTAAAGT-(15)-AATTGACAA
Locus tag: MED297_08751
Name: bioB
Funciton: Biotin synthase (EC 2.8.1.6)
Locus tag: MED297_08756
Name: null
Funciton: 8-amino-7-oxononanoate synthase (EC 2.3.1.47)
Locus tag: MED297_08761
Name: bioH
Funciton: Biotin synthesis protein BioH
Locus tag: MED297_08766
Name: bioC
Funciton: Biotin synthesis protein BioC
Locus tag: MED297_08771
Name: bioD
Funciton: Dethiobiotin synthetase (EC 6.3.3.3)
bioB-MED297_08756-bioH-bioC-bioD -83 6.8 ATGTAAAGT-(15)-AATTGACAA MED297_08751
Saccharophagus degradans 2-40
Position: -90
Score: 8.99046
Sequence: TTGTAAACC-(15)-GGTTGACAG
Locus tag: Sde_3139
Name: bioB
Funciton: Biotin synthase (EC 2.8.1.6)
Locus tag: Sde_3138
Name: null
Funciton: 8-amino-7-oxononanoate synthase
Locus tag: Sde_3137
Name: bioHC
Funciton: Biotin synthesis protein BioH / Biotin synthesis protein BioC
bioB-Sde_3138-bioHC -90 9 TTGTAAACC-(15)-GGTTGACAG Sde_3139
Teredinibacter turnerae T7901
Position: -110
Score: 8.70579
Sequence: TTGTAAACT-(15)-GGTTGACAA
Locus tag: TERTU_0490
Name: bioB
Funciton: Biotin synthase (EC 2.8.1.6)
Locus tag: TERTU_0491
Name: bioF
Funciton: 8-amino-7-oxononanoate synthase
Locus tag: TERTU_0492
Name: bioHC
Funciton: Biotin synthesis protein BioH / Biotin synthesis protein BioC
Locus tag: TERTU_0493
Name: bioD
Funciton: Dethiobiotin synthetase (EC 6.3.3.3)
bioB-bioF-bioHC-bioD -110 8.7 TTGTAAACT-(15)-GGTTGACAA TERTU_0490
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