Orthologous regulated operons containing appD gene

Properties
Regulog:	TnrA - Bacillales
Regulator type:	Transcription factor
Regulator family:	MerR
Regulation mode:	repressor (activator)
Biological process:	Nitrogen assimilation
Effector:	NrgB, ammonium uptake protein; NrgA, ammonium uptake protein; Feedback-inhibited GlnA, glutamine synthetase
Phylum:	Firmicutes

Built upon 304 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Bacillus clausii KSM-K16
Position: -558 Score: 4.32119 Sequence: TGTAAGATTTCTTATCA Locus tag: ABC3661 Name: appA Funciton: Oligopeptide ABC transporter (oligopeptide-binding protein) Locus tag: ABC3660 Name: appB Funciton: Oligopeptide ABC transporter (permease) Locus tag: ABC3659 Name: null Funciton: Oligopeptide ABC transporter (permease) Locus tag: ABC3658 Name: appD Funciton: Oligopeptide ABC transporter (ATP-binding protein) Locus tag: ABC3657 Name: oppF Funciton: Oligopeptide ABC transporter (ATP-binding protein) Locus tag: ABC3656 Name: null Funciton: Peptidase Locus tag: ABC3655 Name: null Funciton: Sodium-dependent dicarboxylate transporter Locus tag: ABC3654 Name: null Funciton: N-acyl-L-amino acid amidohydrolase (EC 3.5.1.14) Locus tag: ABC3653 Name: null Funciton: N-acyl-L-amino acid amidohydrolase (EC 3.5.1.14)
appA-appB-ABC3659-appD-oppF-ABC3656-ABC3655-ABC3654-ABC3653	-558	4.3	TGTAAGATTTCTTATCA	ABC3661

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --