Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing metF gene

Properties
Regulog: VanR - Rhizobiales
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Vanillate utilization
Effector: Vanillate
Phylum: Proteobacteria
Built upon 18 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Agrobacterium tumefaciens str. C58 (Cereon)
Position: -236
Score: 4.89898
Sequence: TGTATACA
Position: -120
Score: 4.08248
Sequence: TGTATTCA
Position: -36
Score: 4.89898
Sequence: TGTATACA
Locus tag: Atu1418
Name: metF
Funciton: methylenetetrahydrofolate reductase
metF -236 4.9 TGTATACA Atu1418
-120 4.1 TGTATTCA
-36 4.9 TGTATACA
Rhizobium leguminosarum bv. viciae 3841
Position: -196
Score: 4.08248
Sequence: TGTATACC
Position: -50
Score: 4.89898
Sequence: TGTATACA
Locus tag: pRL90256
Name: null
Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
Locus tag: pRL90255
Name: gcvT
Funciton: vanillate/3-O-methylgallate O-demethylase
pRL90256-gcvT -196 4.1 TGTATACC pRL90256
-50 4.9 TGTATACA
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