Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing fdx gene

Properties
Regulog: IscR - Alteromonadales
Regulator type: Transcription factor
Regulator family: Rrf2
Regulation mode: activator (repressor)
Biological process: Iron-sulfur cluster biogenesis
Effector: Iron-sulfur cluster redox state
Phylum: Proteobacteria
Built upon 43 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Alteromonadales bacterium TW-7
Position: -187
Score: 7.3039
Sequence: ATACTTGACTAAATTACTCAGGTAA
Position: -148
Score: 6.02959
Sequence: ATACTTGACCAAACAGGTCAGGTAT
Position: -57
Score: 6.99178
Sequence: ATACTTGACTAATTTACTCTGGTAA
Locus tag: ATW7_18135
Name: iscR
Funciton: Iron-sulfur cluster regulator IscR
Locus tag: ATW7_18140
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: ATW7_18145
Name: iscU
Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: ATW7_18150
Name: iscA
Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: ATW7_18155
Name: hscB
Funciton: Chaperone protein HscB
Locus tag: ATW7_18160
Name: hscA
Funciton: Chaperone protein HscA
Locus tag: ATW7_18165
Name: fdx
Funciton: ferredoxin, 2Fe-2S type, ISC system
iscR-iscS-iscU-iscA-hscB-hscA-fdx -187 7.3 ATACTTGACTAAATTACTCAGGTAA ATW7_18135
-148 6 ATACTTGACCAAACAGGTCAGGTAT
-57 7 ATACTTGACTAATTTACTCTGGTAA
Colwellia psychrerythraea 34H
Position: -254
Score: 6.26262
Sequence: ATAGTTGAGTAAAACAGTCAACTAT
Position: -199
Score: 6.52508
Sequence: ATACCTGAGTAAATCACTAGGGTAT
Locus tag: CPS_1131
Name: iscR
Funciton: Iron-sulfur cluster regulator IscR
Locus tag: CPS_1132
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: CPS_1133
Name: iscU
Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: CPS_1134
Name: iscA
Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: CPS_1135
Name: hscB
Funciton: Chaperone protein HscB
Locus tag: CPS_1136
Name: hscA
Funciton: Chaperone protein HscA
Locus tag: CPS_1137
Name: fdx
Funciton: ferredoxin, 2Fe-2S type, ISC system
iscR-iscS-iscU-iscA-hscB-hscA-fdx -254 6.3 ATAGTTGAGTAAAACAGTCAACTAT CPS_1131
-199 6.5 ATACCTGAGTAAATCACTAGGGTAT
Glaciecola sp. HTCC2999
Position: -87
Score: 6.95097
Sequence: ATACTTGACTAAATTAGTCGGTTAA
Position: -62
Score: 7.28547
Sequence: ATACTTGACTAATTTAGTCGGGTAA
Locus tag: GHTCC_010100002924
Name: iscR
Funciton: Iron-sulfur cluster regulator IscR
Locus tag: GHTCC_010100002929
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: GHTCC_010100002934
Name: iscU
Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: GHTCC_010100002939
Name: iscA
Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: GHTCC_010100002944
Name: hscB
Funciton: Chaperone protein HscB
Locus tag: GHTCC_010100002949
Name: hscA
Funciton: Chaperone protein HscA
Locus tag: GHTCC_010100002954
Name: fdx
Funciton: ferredoxin, 2Fe-2S type, ISC system
iscR-iscS-iscU-iscA-hscB-hscA-fdx -87 7 ATACTTGACTAAATTAGTCGGTTAA GHTCC_010100002924
-62 7.3 ATACTTGACTAATTTAGTCGGGTAA
Pseudoalteromonas atlantica T6c
Position: -87
Score: 6.45238
Sequence: ATACTTGACTAAAACAGTAGGATAA
Position: -62
Score: 7.01621
Sequence: ATACTTGACTAAAATAGTCGGGTTT
Locus tag: Patl_1237
Name: iscR
Funciton: Iron-sulfur cluster regulator IscR
Locus tag: Patl_1238
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: Patl_1239
Name: iscU
Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: Patl_1240
Name: iscA
Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: Patl_1241
Name: hscB
Funciton: Chaperone protein HscB
Locus tag: Patl_1242
Name: hscA
Funciton: Chaperone protein HscA
Locus tag: Patl_1243
Name: fdx
Funciton: ferredoxin, 2Fe-2S type, ISC system
iscR-iscS-iscU-iscA-hscB-hscA-fdx -87 6.5 ATACTTGACTAAAACAGTAGGATAA Patl_1237
-62 7 ATACTTGACTAAAATAGTCGGGTTT
Pseudoalteromonas haloplanktis TAC125
Position: -157
Score: 7.3039
Sequence: ATACTTGACTAAATTACTCAGGTAA
Position: -117
Score: 7.04145
Sequence: ATACTTGAGTAAAACACTCAGGTAT
Position: -58
Score: 6.99178
Sequence: ATACTTGACTAATTTACTCTGGTAA
Locus tag: PSHAa2672
Name: iscR
Funciton: Iron-sulfur cluster regulator IscR
Locus tag: PSHAa2671
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: PSHAa2670
Name: iscU
Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: PSHAa2669
Name: iscA
Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: PSHAa2668
Name: hscB
Funciton: Chaperone protein HscB
Locus tag: PSHAa2667
Name: hscA
Funciton: Chaperone protein HscA
Locus tag: PSHAa2666
Name: fdx
Funciton: ferredoxin, 2Fe-2S type, ISC system
iscR-iscS-iscU-iscA-hscB-hscA-fdx -157 7.3 ATACTTGACTAAATTACTCAGGTAA PSHAa2672
-117 7 ATACTTGAGTAAAACACTCAGGTAT
-58 7 ATACTTGACTAATTTACTCTGGTAA
Pseudoalteromonas tunicata D2
Position: -149
Score: 7.38783
Sequence: ATACTTGACTAAATTAGTCGGGTAT
Position: -107
Score: 7.33665
Sequence: ATACTTGACTAAATTAGTCGGGTAA
Position: -66
Score: 6.41803
Sequence: ATACTTGACTCTTTTAGTCAGGTTA
Locus tag: PTD2_13944
Name: iscR
Funciton: Iron-sulfur cluster regulator IscR
Locus tag: PTD2_13939
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: PTD2_13934
Name: iscU
Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: PTD2_13929
Name: iscA
Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: PTD2_13924
Name: hscB
Funciton: Chaperone protein HscB
Locus tag: PTD2_13919
Name: hscA
Funciton: Chaperone protein HscA
Locus tag: PTD2_13914
Name: fdx
Funciton: ferredoxin, 2Fe-2S type, ISC system
iscR-iscS-iscU-iscA-hscB-hscA-fdx -149 7.4 ATACTTGACTAAATTAGTCGGGTAT PTD2_13944
-107 7.3 ATACTTGACTAAATTAGTCGGGTAA
-66 6.4 ATACTTGACTCTTTTAGTCAGGTTA
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