Orthologous regulated operons containing iscR gene
| Regulog: | IscR - Alteromonadales |
| Regulator type: | Transcription factor |
| Regulator family: | Rrf2 |
| Regulation mode: | activator (repressor) |
| Biological process: | Iron-sulfur cluster biogenesis |
| Effector: | Iron-sulfur cluster redox state |
| Phylum: | Proteobacteria |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Alteromonadales bacterium TW-7 | ||||
|
Position: -187
Score: 7.3039 Sequence: ATACTTGACTAAATTACTCAGGTAA
Position: -148
Score: 6.02959 Sequence: ATACTTGACCAAACAGGTCAGGTAT
Position: -57
Score: 6.99178 Sequence: ATACTTGACTAATTTACTCTGGTAA
Locus tag: ATW7_18135
Name: iscR Funciton: Iron-sulfur cluster regulator IscR
Locus tag: ATW7_18140
Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: ATW7_18145
Name: iscU Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: ATW7_18150
Name: iscA Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: ATW7_18155
Name: hscB Funciton: Chaperone protein HscB
Locus tag: ATW7_18160
Name: hscA Funciton: Chaperone protein HscA
Locus tag: ATW7_18165
Name: fdx Funciton: ferredoxin, 2Fe-2S type, ISC system |
||||
| iscR-iscS-iscU-iscA-hscB-hscA-fdx | -187 | 7.3 | ATACTTGACTAAATTACTCAGGTAA | ATW7_18135 |
| -148 | 6 | ATACTTGACCAAACAGGTCAGGTAT | ||
| -57 | 7 | ATACTTGACTAATTTACTCTGGTAA | ||
| Alteromonas macleodii 'Deep ecotype' | ||||
|
Position: -88
Score: 6.07992 Sequence: ATACTTGACTAATTTACTGGGTTTT
Position: -63
Score: 6.87461 Sequence: ATACTTGACCATTTTAGTCAGGTAT
Locus tag: MADE_01355
Name: iscR Funciton: Iron-sulfur cluster regulator IscR
Locus tag: MADE_01356
Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily |
||||
| iscR-iscS | -88 | 6.1 | ATACTTGACTAATTTACTGGGTTTT | MADE_01355 |
| -63 | 6.9 | ATACTTGACCATTTTAGTCAGGTAT | ||
| Colwellia psychrerythraea 34H | ||||
|
Position: -254
Score: 6.26262 Sequence: ATAGTTGAGTAAAACAGTCAACTAT
Position: -199
Score: 6.52508 Sequence: ATACCTGAGTAAATCACTAGGGTAT
Locus tag: CPS_1131
Name: iscR Funciton: Iron-sulfur cluster regulator IscR
Locus tag: CPS_1132
Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: CPS_1133
Name: iscU Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: CPS_1134
Name: iscA Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: CPS_1135
Name: hscB Funciton: Chaperone protein HscB
Locus tag: CPS_1136
Name: hscA Funciton: Chaperone protein HscA
Locus tag: CPS_1137
Name: fdx Funciton: ferredoxin, 2Fe-2S type, ISC system |
||||
| iscR-iscS-iscU-iscA-hscB-hscA-fdx | -254 | 6.3 | ATAGTTGAGTAAAACAGTCAACTAT | CPS_1131 |
| -199 | 6.5 | ATACCTGAGTAAATCACTAGGGTAT | ||
| Glaciecola sp. HTCC2999 | ||||
|
Position: -87
Score: 6.95097 Sequence: ATACTTGACTAAATTAGTCGGTTAA
Position: -62
Score: 7.28547 Sequence: ATACTTGACTAATTTAGTCGGGTAA
Locus tag: GHTCC_010100002924
Name: iscR Funciton: Iron-sulfur cluster regulator IscR
Locus tag: GHTCC_010100002929
Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: GHTCC_010100002934
Name: iscU Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: GHTCC_010100002939
Name: iscA Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: GHTCC_010100002944
Name: hscB Funciton: Chaperone protein HscB
Locus tag: GHTCC_010100002949
Name: hscA Funciton: Chaperone protein HscA
Locus tag: GHTCC_010100002954
Name: fdx Funciton: ferredoxin, 2Fe-2S type, ISC system |
||||
| iscR-iscS-iscU-iscA-hscB-hscA-fdx | -87 | 7 | ATACTTGACTAAATTAGTCGGTTAA | GHTCC_010100002924 |
| -62 | 7.3 | ATACTTGACTAATTTAGTCGGGTAA | ||
| Idiomarina baltica OS145 | ||||
|
Position: -75
Score: 6.62253 Sequence: ATACTTGACTAATTTAGTCGGAAAA
Locus tag: OS145_04890
Name: iscR Funciton: Iron-sulfur cluster regulator IscR
Locus tag: OS145_04885
Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily |
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| iscR-iscS | -75 | 6.6 | ATACTTGACTAATTTAGTCGGAAAA | OS145_04890 |
| Idiomarina loihiensis L2TR | ||||
|
Position: -74
Score: 6.96874 Sequence: ATACTTGACTAAAATAGTCGGGAAT
Locus tag: IL2041
Name: iscR Funciton: Iron-sulfur cluster regulator IscR
Locus tag: IL2040
Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily |
||||
| iscR-iscS | -74 | 7 | ATACTTGACTAAAATAGTCGGGAAT | IL2041 |
| Pseudoalteromonas atlantica T6c | ||||
|
Position: -87
Score: 6.45238 Sequence: ATACTTGACTAAAACAGTAGGATAA
Position: -62
Score: 7.01621 Sequence: ATACTTGACTAAAATAGTCGGGTTT
Locus tag: Patl_1237
Name: iscR Funciton: Iron-sulfur cluster regulator IscR
Locus tag: Patl_1238
Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: Patl_1239
Name: iscU Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: Patl_1240
Name: iscA Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: Patl_1241
Name: hscB Funciton: Chaperone protein HscB
Locus tag: Patl_1242
Name: hscA Funciton: Chaperone protein HscA
Locus tag: Patl_1243
Name: fdx Funciton: ferredoxin, 2Fe-2S type, ISC system |
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| iscR-iscS-iscU-iscA-hscB-hscA-fdx | -87 | 6.5 | ATACTTGACTAAAACAGTAGGATAA | Patl_1237 |
| -62 | 7 | ATACTTGACTAAAATAGTCGGGTTT | ||
| Pseudoalteromonas haloplanktis TAC125 | ||||
|
Position: -157
Score: 7.3039 Sequence: ATACTTGACTAAATTACTCAGGTAA
Position: -117
Score: 7.04145 Sequence: ATACTTGAGTAAAACACTCAGGTAT
Position: -58
Score: 6.99178 Sequence: ATACTTGACTAATTTACTCTGGTAA
Locus tag: PSHAa2672
Name: iscR Funciton: Iron-sulfur cluster regulator IscR
Locus tag: PSHAa2671
Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: PSHAa2670
Name: iscU Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: PSHAa2669
Name: iscA Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: PSHAa2668
Name: hscB Funciton: Chaperone protein HscB
Locus tag: PSHAa2667
Name: hscA Funciton: Chaperone protein HscA
Locus tag: PSHAa2666
Name: fdx Funciton: ferredoxin, 2Fe-2S type, ISC system |
||||
| iscR-iscS-iscU-iscA-hscB-hscA-fdx | -157 | 7.3 | ATACTTGACTAAATTACTCAGGTAA | PSHAa2672 |
| -117 | 7 | ATACTTGAGTAAAACACTCAGGTAT | ||
| -58 | 7 | ATACTTGACTAATTTACTCTGGTAA | ||
| Pseudoalteromonas tunicata D2 | ||||
|
Position: -149
Score: 7.38783 Sequence: ATACTTGACTAAATTAGTCGGGTAT
Position: -107
Score: 7.33665 Sequence: ATACTTGACTAAATTAGTCGGGTAA
Position: -66
Score: 6.41803 Sequence: ATACTTGACTCTTTTAGTCAGGTTA
Locus tag: PTD2_13944
Name: iscR Funciton: Iron-sulfur cluster regulator IscR
Locus tag: PTD2_13939
Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: PTD2_13934
Name: iscU Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: PTD2_13929
Name: iscA Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: PTD2_13924
Name: hscB Funciton: Chaperone protein HscB
Locus tag: PTD2_13919
Name: hscA Funciton: Chaperone protein HscA
Locus tag: PTD2_13914
Name: fdx Funciton: ferredoxin, 2Fe-2S type, ISC system |
||||
| iscR-iscS-iscU-iscA-hscB-hscA-fdx | -149 | 7.4 | ATACTTGACTAAATTAGTCGGGTAT | PTD2_13944 |
| -107 | 7.3 | ATACTTGACTAAATTAGTCGGGTAA | ||
| -66 | 6.4 | ATACTTGACTCTTTTAGTCAGGTTA | ||