Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing ntcB gene

Properties
Regulog: NtcB - Cyanobacteria
Regulator type: Transcription factor
Regulator family: LysR
Regulation mode: activator (repressor)
Biological process: Nitrogen assimilation
Effector: Nitrite
Phylum: Cyanobacteria
Built upon 44 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Cyanothece sp. ATCC 51142
Position: -125
Score: 3.60662
Sequence: AGACAAAAACTCCAT
Locus tag: cce_0198
Name: ntcB
Funciton: nitrogen assimilation transcriptional activator NtcB
ntcB -125 3.6 AGACAAAAACTCCAT cce_0198
Nostoc sp. PCC 7120
Position: -31
Score: 3.88692
Sequence: ATGCCGTAAATGTAA
Locus tag: all0602
Name: ntcB
Funciton: nitrogen assimilation transcriptional activator NtcB
ntcB -31 3.9 ATGCCGTAAATGTAA all0602
Synechococcus elongatus PCC 7942
Position: -192
Score: 4.29271
Sequence: ATGCATGTTCTGCAA
Locus tag: Synpcc7942_1241
Name: null
Funciton: nitrite reductase related protein
Locus tag: Synpcc7942_1242
Name: ntcB
Funciton: nitrogen assimilation transcriptional activator NtcB
Synpcc7942_1241-ntcB -192 4.3 ATGCATGTTCTGCAA Synpcc7942_1241
Synechococcus sp. PCC 7002
Position: -56
Score: 4.43578
Sequence: ATGCAGTAAACTCAT
Locus tag: SYNPCC7002_A1632
Name: ntcB
Funciton: nitrogen assimilation transcriptional activator NtcB
ntcB -56 4.4 ATGCAGTAAACTCAT SYNPCC7002_A1632
Synechocystis sp. PCC 6803
Position: -187
Score: 3.97095
Sequence: ATGGATTCTTTTCAT
Locus tag: slr0395
Name: ntcB
Funciton: nitrogen assimilation transcriptional activator NtcB
ntcB -187 4 ATGGATTCTTTTCAT slr0395
Thermosynechococcus elongatus BP-1
Position: -99
Score: 4.20423
Sequence: ATGGGAAAGTTGCAT
Locus tag: null
Name: ntcB
Funciton: nitrogen assimilation transcriptional activator NtcB
ntcB -99 4.2 ATGGGAAAGTTGCAT null
Trichodesmium erythraeum IMS101
Position: -87
Score: 4.06655
Sequence: ATGAAATATTTATAT
Locus tag: Tery_4333
Name: ntcB
Funciton: nitrogen assimilation transcriptional activator NtcB
ntcB -87 4.1 ATGAAATATTTATAT Tery_4333
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