Orthologous regulated operons containing nrtD gene
| Regulog: | NtcB - Cyanobacteria |
| Regulator type: | Transcription factor |
| Regulator family: | LysR |
| Regulation mode: | activator (repressor) |
| Biological process: | Nitrogen assimilation |
| Effector: | Nitrite |
| Phylum: | Cyanobacteria |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Cyanothece sp. PCC 7425 | ||||
|
Position: -174
Score: 4.46833 Sequence: ATGCAGGTTTGGCAT
Locus tag: Cyan7425_4573
Name: nirA Funciton: ferredoxin--nitrite reductase
Locus tag: Cyan7425_4572
Name: nrtA Funciton: nitrate/nitrite ABC transport system, substrate-binding protein
Locus tag: Cyan7425_4571
Name: nrtB Funciton: nitrate/nitrite ABC transport system, permease protein
Locus tag: Cyan7425_4570
Name: nrtC Funciton: nitrate/nitrite ABC transport system, ATP-binding protein
Locus tag: Cyan7425_4569
Name: nrtD Funciton: nitrate/nitrite ABC transport system, ATP-binding protein |
||||
| nirA-nrtA-nrtB-nrtC-nrtD | -174 | 4.5 | ATGCAGGTTTGGCAT | Cyan7425_4573 |
| Cyanothece sp. PCC 8801 | ||||
|
Position: -235
Score: 4.50998 Sequence: ATGCAAAAACCACAT
Position: -213
Score: 3.97851 Sequence: ATGCTTTTATTGCAA
Locus tag: PCC8801_4396
Name: nrtA Funciton: nitrate/nitrite ABC transport system, substrate-binding protein
Locus tag: PCC8801_4395
Name: nrtB Funciton: nitrate/nitrite ABC transport system, permease protein
Locus tag: PCC8801_4394
Name: nrtC Funciton: nitrate/nitrite ABC transport system, ATP-binding protein
Locus tag: PCC8801_4393
Name: nrtD Funciton: nitrate/nitrite ABC transport system, ATP-binding protein |
||||
| nrtA-nrtB-nrtC-nrtD | -235 | 4.5 | ATGCAAAAACCACAT | PCC8801_4396 |
| -213 | 4 | ATGCTTTTATTGCAA | ||
| Microcystis aeruginosa NIES-843 | ||||
|
Position: -395
Score: 3.65433 Sequence: ATGCTTTTATGACAT
Locus tag: MAE_14800
Name: nrtA Funciton: nitrate/nitrite ABC transport system, substrate-binding protein
Locus tag: MAE_14790
Name: nrtB Funciton: nitrate/nitrite ABC transport system, permease protein
Locus tag: MAE_14780
Name: nrtC Funciton: nitrate/nitrite ABC transport system, ATP-binding protein
Locus tag: MAE_14770
Name: nrtD Funciton: nitrate/nitrite ABC transport system, ATP-binding protein |
||||
| nrtA-nrtB-nrtC-nrtD | -395 | 3.7 | ATGCTTTTATGACAT | MAE_14800 |
| Nostoc sp. PCC 7120 | ||||
|
Position: -562
Score: 4.76358 Sequence: ATGCAGAAAACGCAT
Locus tag: alr0607
Name: nirA Funciton: ferredoxin--nitrite reductase
Locus tag: alr0608
Name: nrtA Funciton: nitrate/nitrite ABC transport system, substrate-binding protein
Locus tag: alr0609
Name: nrtB Funciton: nitrate/nitrite ABC transport system, permease protein
Locus tag: alr0610
Name: nrtC Funciton: nitrate/nitrite ABC transport system, ATP-binding protein
Locus tag: alr0611
Name: nrtD Funciton: nitrate/nitrite ABC transport system, ATP-binding protein
Locus tag: alr0612
Name: narB Funciton: nitrate reductase |
||||
| nirA-nrtA-nrtB-nrtC-nrtD-narB | -562 | 4.8 | ATGCAGAAAACGCAT | alr0607 |
| Synechococcus elongatus PCC 7942 | ||||
|
Position: -109
Score: 4.29271 Sequence: TTGCAGAACATGCAT
Locus tag: Synpcc7942_1240
Name: nirA Funciton: ferredoxin--nitrite reductase
Locus tag: Synpcc7942_1239
Name: nrtA Funciton: nitrate/nitrite ABC transport system, substrate-binding protein
Locus tag: Synpcc7942_1238
Name: nrtB Funciton: nitrate/nitrite ABC transport system, permease protein
Locus tag: Synpcc7942_1237
Name: nrtC Funciton: nitrate/nitrite ABC transport system, ATP-binding protein
Locus tag: Synpcc7942_1236
Name: nrtD Funciton: nitrate/nitrite ABC transport system, ATP-binding protein
Locus tag: Synpcc7942_1235
Name: narB Funciton: nitrate reductase |
||||
| nirA-nrtA-nrtB-nrtC-nrtD-narB | -109 | 4.3 | TTGCAGAACATGCAT | Synpcc7942_1240 |
| Synechococcus sp. JA-3-3Ab | ||||
|
Position: -101
Score: 4.3847 Sequence: ATGACAAAACTGCAT
Locus tag: CYA_0612
Name: nirA Funciton: ferredoxin--nitrite reductase
Locus tag: CYA_0613
Name: nrtA Funciton: nitrate/nitrite ABC transport system, substrate-binding protein
Locus tag: CYA_0614
Name: nrtB Funciton: nitrate/nitrite ABC transport system, permease protein
Locus tag: CYA_0615
Name: nrtC Funciton: nitrate/nitrite ABC transport system, ATP-binding protein
Locus tag: CYA_0616
Name: nrtD Funciton: nitrate/nitrite ABC transport system, ATP-binding protein |
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| nirA-nrtA-nrtB-nrtC-nrtD | -101 | 4.4 | ATGACAAAACTGCAT | CYA_0612 |
| Synechocystis sp. PCC 6803 | ||||
|
Position: -125
Score: 4.93558 Sequence: ATGCAGTAATCGCAT
Locus tag: sll1450
Name: nrtA Funciton: nitrate/nitrite ABC transport system, substrate-binding protein
Locus tag: sll1451
Name: nrtB Funciton: nitrate/nitrite ABC transport system, permease protein
Locus tag: sll1452
Name: nrtC Funciton: nitrate/nitrite ABC transport system, ATP-binding protein
Locus tag: sll1453
Name: nrtD Funciton: nitrate/nitrite ABC transport system, ATP-binding protein
Locus tag: sll1454
Name: narB Funciton: nitrate reductase |
||||
| nrtA-nrtB-nrtC-nrtD-narB | -125 | 4.9 | ATGCAGTAATCGCAT | sll1450 |
| Thermosynechococcus elongatus BP-1 | ||||
|
Position: -111
Score: 4.396 Sequence: ATACAAAAACTGTAT
Locus tag: tlr1349
Name: nirA Funciton: ferredoxin--nitrite reductase
Locus tag: tlr1350
Name: nrtA Funciton: nitrate/nitrite ABC transport system, substrate-binding protein
Locus tag: tlr1351
Name: nrtB Funciton: nitrate/nitrite ABC transport system, permease protein
Locus tag: tlr1352
Name: nrtC Funciton: nitrate/nitrite ABC transport system, ATP-binding protein
Locus tag: tlr1353
Name: null Funciton: ORF_ID:tlr1353~putative transposase
Locus tag: tlr1354
Name: nrtD Funciton: nitrate/nitrite ABC transport system, ATP-binding protein
Locus tag: tlr1355
Name: narB Funciton: nitrate reductase |
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| nirA-nrtA-nrtB-nrtC-tlr1353-nrtD-narB | -111 | 4.4 | ATACAAAAACTGTAT | tlr1349 |