Orthologous regulated operons containing nrtB gene

Properties
Regulog:	NtcA - Cyanobacteria
Regulator type:	Transcription factor
Regulator family:	CRP
Regulation mode:	activator
Biological process:	Nitrogen assimilation
Effector:	2-oxoglutarate
Phylum:	Cyanobacteria

Built upon 228 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Cyanothece sp. PCC 7425
Position: -123 Score: 4.48905 Sequence: TGTAACTTAATATACC Locus tag: Cyan7425_4573 Name: nirA Funciton: Nitrite reductase, ferredoxin dependent Locus tag: Cyan7425_4572 Name: nrtA Funciton: Nitrate/nitrite ABC transporter, substrate-binding protein Locus tag: Cyan7425_4571 Name: nrtB Funciton: Nitrate/nitrite ABC transporter, permease protein Locus tag: Cyan7425_4570 Name: nrtC Funciton: Nitrate/nitrite ABC transporter, ATP-binding protein 1 Locus tag: Cyan7425_4569 Name: nrtD Funciton: Nitrate/nitrite ABC transporter, ATP-binding protein 2
nirA-nrtA-nrtB-nrtC-nrtD	-123	4.5	TGTAACTTAATATACC	Cyan7425_4573
Cyanothece sp. PCC 8801
Position: -184 Score: 4.55736 Sequence: TGTAGCAAATAATACG Position: -106 Score: 3.87815 Sequence: AGTATTTATAGACACA Locus tag: PCC8801_4396 Name: nrtA Funciton: Nitrate/nitrite ABC transporter, substrate-binding protein Locus tag: PCC8801_4395 Name: nrtB Funciton: Nitrate/nitrite ABC transporter, permease protein Locus tag: PCC8801_4394 Name: nrtC Funciton: Nitrate/nitrite ABC transporter, ATP-binding protein 1 Locus tag: PCC8801_4393 Name: nrtD Funciton: Nitrate/nitrite ABC transporter, ATP-binding protein 2
nrtA-nrtB-nrtC-nrtD	-184	4.6	TGTAGCAAATAATACG	PCC8801_4396
	-106	3.9	AGTATTTATAGACACA
Microcystis aeruginosa NIES-843
Position: -177 Score: 4.18453 Sequence: TGTAACAATCTATACG Locus tag: MAE_14810 Name: MAE_14810 Funciton: Hypothetical protein Locus tag: MAE_14800 Name: nrtA Funciton: Nitrate/nitrite ABC transporter, substrate-binding protein Locus tag: MAE_14790 Name: nrtB Funciton: Nitrate/nitrite ABC transporter, permease protein Locus tag: MAE_14780 Name: nrtC Funciton: Nitrate/nitrite ABC transporter, ATP-binding protein 1 Locus tag: MAE_14770 Name: nrtD Funciton: Nitrate/nitrite ABC transporter, ATP-binding protein 2
MAE_14810-nrtA-nrtB-nrtC-nrtD	-177	4.2	TGTAACAATCTATACG	MAE_14810
Synechococcus elongatus PCC 7942
Position: -220 Score: 4.87616 Sequence: TGTAGCAATTGCTACT Position: -149 Score: 4.2705 Sequence: AGTATCAATGATTACT Position: -80 Score: 4.39358 Sequence: TGTAGTTTCTGTTACC Locus tag: Synpcc7942_1240 Name: nirA Funciton: Nitrite reductase, ferredoxin dependent Locus tag: Synpcc7942_1239 Name: nrtA Funciton: Nitrate/nitrite ABC transporter, substrate-binding protein Locus tag: Synpcc7942_1238 Name: nrtB Funciton: Nitrate/nitrite ABC transporter, permease protein Locus tag: Synpcc7942_1237 Name: nrtC Funciton: Nitrate/nitrite ABC transporter, ATP-binding protein 1 Locus tag: Synpcc7942_1236 Name: nrtD Funciton: Nitrate/nitrite ABC transporter, ATP-binding protein 2 Locus tag: Synpcc7942_1235 Name: narB Funciton: Nitrate reductase
nirA-nrtA-nrtB-nrtC-nrtD-narB	-220	4.9	TGTAGCAATTGCTACT	Synpcc7942_1240
	-149	4.3	AGTATCAATGATTACT
	-80	4.4	TGTAGTTTCTGTTACC
Synechococcus sp. JA-3-3Ab
Position: -72 Score: 3.93271 Sequence: TGTAACTGCCAATACC Locus tag: CYA_0612 Name: nirA Funciton: Nitrite reductase, ferredoxin dependent Locus tag: CYA_0613 Name: nrtA Funciton: Nitrate/nitrite ABC transporter, substrate-binding protein Locus tag: CYA_0614 Name: nrtB Funciton: Nitrate/nitrite ABC transporter, permease protein Locus tag: CYA_0615 Name: nrtC Funciton: Nitrate/nitrite ABC transporter, ATP-binding protein 1 Locus tag: CYA_0616 Name: nrtD Funciton: Nitrate/nitrite ABC transporter, ATP-binding protein 2
nirA-nrtA-nrtB-nrtC-nrtD	-72	3.9	TGTAACTGCCAATACC	CYA_0612
Synechocystis sp. PCC 6803
Position: -96 Score: 3.91884 Sequence: AGTTACAAACTATACA Locus tag: sll1450 Name: nrtA Funciton: Nitrate/nitrite ABC transporter, substrate-binding protein Locus tag: sll1451 Name: nrtB Funciton: Nitrate/nitrite ABC transporter, permease protein Locus tag: sll1452 Name: nrtC Funciton: Nitrate/nitrite ABC transporter, ATP-binding protein 1 Locus tag: sll1453 Name: nrtD Funciton: Nitrate/nitrite ABC transporter, ATP-binding protein 2 Locus tag: sll1454 Name: narB Funciton: Nitrate reductase
nrtA-nrtB-nrtC-nrtD-narB	-96	3.9	AGTTACAAACTATACA	sll1450
Thermosynechococcus elongatus BP-1
Position: -82 Score: 4.62829 Sequence: AGTAGCAAAATTTACA Locus tag: tlr1349 Name: nirA Funciton: Nitrite reductase, ferredoxin dependent Locus tag: tlr1350 Name: nrtA Funciton: Nitrate/nitrite ABC transporter, substrate-binding protein Locus tag: tlr1351 Name: nrtB Funciton: Nitrate/nitrite ABC transporter, permease protein Locus tag: tlr1352 Name: nrtC Funciton: Nitrate/nitrite ABC transporter, ATP-binding protein 1 Locus tag: tlr1353 Name: tlr1353 Funciton: putative transposase Locus tag: tlr1354 Name: nrtD Funciton: Nitrate/nitrite ABC transporter, ATP-binding protein 2 Locus tag: tlr1355 Name: narB Funciton: Nitrate reductase
nirA-nrtA-nrtB-nrtC-tlr1353-nrtD-narB	-82	4.6	AGTAGCAAAATTTACA	tlr1349

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Orthologous regulated operons containing nrtB gene

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --