Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing amt1 gene

Properties
Regulog: NtcA - Cyanobacteria
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: activator
Biological process: Nitrogen assimilation
Effector: 2-oxoglutarate
Phylum: Cyanobacteria
Built upon 228 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Cyanothece sp. ATCC 51142
Position: -152
Score: 3.5132
Sequence: TGTtAaggtTGTaACA
Locus tag: cce_3261
Name: amt1
Funciton: ammonium transporter
amt1 -152 3.5 TGTtAaggtTGTaACA cce_3261
Cyanothece sp. PCC 7425
Position: -228
Score: 4.43782
Sequence: TGTATAACGTGATACA
Locus tag: Cyan7425_0782
Name: amt1
Funciton: ammonium transporter
amt1 -228 4.4 TGTATAACGTGATACA Cyan7425_0782
Cyanothece sp. PCC 8801
Position: -264
Score: 5.01217
Sequence: TGTATTTTTTGATACA
Position: -229
Score: 4.10915
Sequence: AGTAATAAAAAAAACA
Locus tag: PCC8801_1229
Name: amt1
Funciton: ammonium transporter
amt1 -264 5 TGTATTTTTTGATACA PCC8801_1229
-229 4.1 AGTAATAAAAAAAACA
Microcystis aeruginosa NIES-843
Position: -213
Score: 4.62185
Sequence: TGTATCAACGAATACA
Locus tag: MAE_40010
Name: amt1
Funciton: ammonium transporter
amt1 -213 4.6 TGTATCAACGAATACA MAE_40010
Nostoc sp. PCC 7120
Position: -50
Score: 4.68292
Sequence: TGTAACTAAGTATACA
Locus tag: alr0992
Name: amt1
Funciton: ammonium transporter
amt1 -50 4.7 TGTAACTAAGTATACA alr0992
Prochlorococcus marinus str. MIT 9313
Position: -160
Score: 3.83519
Sequence: TGTAACAAAATGAACT
Locus tag: PMT1853
Name: amt1
Funciton: ammonium transporter
amt1 -160 3.8 TGTAACAAAATGAACT PMT1853
Synechococcus elongatus PCC 7942
Position: -151
Score: 4.149
Sequence: TGTTACATCGATTACA
Locus tag: Synpcc7942_0442
Name: amt1
Funciton: ammonium transporter
amt1 -151 4.1 TGTTACATCGATTACA Synpcc7942_0442
Synechococcus sp. PCC 7002
Position: -52
Score: 3.67333
Sequence: GGTTACTTCTGCTACC
Locus tag: SYNPCC7002_A2208
Name: amt1
Funciton: ammonium transporter
amt1 -52 3.7 GGTTACTTCTGCTACC SYNPCC7002_A2208
Synechococcus sp. WH 8102
Position: -100
Score: 4.21622
Sequence: TGTATCAATTAACACA
Locus tag: SYNW0253
Name: amt1
Funciton: ammonium transporter
amt1 -100 4.2 TGTATCAATTAACACA SYNW0253
Synechocystis sp. PCC 6803
Position: -189
Score: 4.01813
Sequence: AGTAGTAAATCATACA
Position: -18
Score: 4.35956
Sequence: TGTAGATTAAAGTACA
Locus tag: sll0108
Name: amt1
Funciton: ammonium transporter
amt1 -189 4 AGTAGTAAATCATACA sll0108
-18 4.4 TGTAGATTAAAGTACA
Thermosynechococcus elongatus BP-1
Position: -190
Score: 4.43782
Sequence: TGTATAACGTGATACA
Locus tag: amt1
Name: amt1
Funciton: ammonium transporter
amt1 -190 4.4 TGTATAACGTGATACA amt1
Trichodesmium erythraeum IMS101
Position: -83
Score: 4.91709
Sequence: AGTAGCATTTGATACA
Locus tag: Tery_4477
Name: amt1
Funciton: ammonium transporter
amt1 -83 4.9 AGTAGCATTTGATACA Tery_4477
© 2009-2020 RegPrecise