Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing hscB gene

Properties
Regulog: IscR - Vibrionales
Regulator type: Transcription factor
Regulator family: Rrf2
Regulation mode: activator (repressor)
Biological process: Iron-sulfur cluster biogenesis
Effector: Iron-sulfur cluster redox state
Phylum: Proteobacteria
Built upon 39 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Photobacterium profundum SS9
Position: -91
Score: 6.4083
Sequence: AAACCTGACTAAAATCGTCAGGTAA
Position: -66
Score: 7.07927
Sequence: ATACTTGACCATTTTAGTCGGGTAT
Locus tag: PBPRA0749
Name: iscR
Funciton: Iron-sulfur cluster regulator IscR
Locus tag: PBPRA0750
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: PBPRA0751
Name: iscU
Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: PBPRA0752
Name: iscA
Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: PBPRA0753
Name: hscB
Funciton: Chaperone protein HscB
Locus tag: PBPRA0754
Name: hscA
Funciton: Chaperone protein HscA
Locus tag: PBPRA0755
Name: fdx
Funciton: ferredoxin, 2Fe-2S type, ISC system
Locus tag: PBPRA0756
Name: yfhJ
Funciton: putative Fe-S cluster assembly protein
iscR-iscS-iscU-iscA-hscB-hscA-fdx-yfhJ -91 6.4 AAACCTGACTAAAATCGTCAGGTAA PBPRA0749
-66 7.1 ATACTTGACCATTTTAGTCGGGTAT
Vibrio angustum S14
Position: -128
Score: 5.82461
Sequence: ATACCCTACTAGAACAGTCAGGTAA
Position: -103
Score: 6.73401
Sequence: ATACTTGACCAATTTAGTATGGTAT
Locus tag: VAS14_06718
Name: iscR
Funciton: Iron-sulfur cluster regulator IscR
Locus tag: VAS14_06713
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: VAS14_06708
Name: iscU
Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: VAS14_06703
Name: iscA
Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: VAS14_06698
Name: hscB
Funciton: Chaperone protein HscB
Locus tag: VAS14_06693
Name: hscA
Funciton: Chaperone protein HscA
Locus tag: VAS14_06688
Name: fdx
Funciton: ferredoxin, 2Fe-2S type, ISC system
Locus tag: VAS14_06683
Name: yfhJ
Funciton: putative Fe-S cluster assembly protein
iscR-iscS-iscU-iscA-hscB-hscA-fdx-yfhJ -128 5.8 ATACCCTACTAGAACAGTCAGGTAA VAS14_06718
-103 6.7 ATACTTGACCAATTTAGTATGGTAT
Vibrio cholerae O1 biovar eltor str. N16961
Position: -48
Score: 6.88519
Sequence: ATACCTGACTAAATTAGTCAAATAA
Position: -23
Score: 6.88847
Sequence: ATACTTGACCAAAAGAGTCAAGTAT
Locus tag: VC0747
Name: iscR
Funciton: Iron-sulfur cluster regulator IscR
Locus tag: VC0748
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: VC0749
Name: iscU
Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: VC0750
Name: iscA
Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: VC0751
Name: hscB
Funciton: Chaperone protein HscB
Locus tag: VC0752
Name: hscA
Funciton: Chaperone protein HscA
Locus tag: VC0753
Name: fdx
Funciton: ferredoxin, 2Fe-2S type, ISC system
Locus tag: VC0754
Name: yfhJ
Funciton: putative Fe-S cluster assembly protein
iscR-iscS-iscU-iscA-hscB-hscA-fdx-yfhJ -48 6.9 ATACCTGACTAAATTAGTCAAATAA VC0747
-23 6.9 ATACTTGACCAAAAGAGTCAAGTAT
Vibrio fischeri ES114
Position: -94
Score: 6.30175
Sequence: GTACTTGACTAAAATAGTAGGATAA
Position: -69
Score: 7.40966
Sequence: ATACTTGACCAAAATAGTCAGGTAT
Locus tag: VF_0616
Name: iscR
Funciton: Iron-sulfur cluster regulator IscR
Locus tag: VF_0617
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: VF_0618
Name: iscU
Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: VF_0619
Name: iscA
Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: VF_0620
Name: hscB
Funciton: Chaperone protein HscB
Locus tag: VF_0621
Name: hscA
Funciton: Chaperone protein HscA
Locus tag: VF_0622
Name: fdx
Funciton: ferredoxin, 2Fe-2S type, ISC system
Locus tag: VF_0623
Name: yfhJ
Funciton: putative Fe-S cluster assembly protein
iscR-iscS-iscU-iscA-hscB-hscA-fdx-yfhJ -94 6.3 GTACTTGACTAAAATAGTAGGATAA VF_0616
-69 7.4 ATACTTGACCAAAATAGTCAGGTAT
Vibrio harveyi ATCC BAA-1116
Position: -93
Score: 6.86587
Sequence: ATACCTGACTAAAATAGTCAAATAA
Position: -68
Score: 6.7275
Sequence: ATACTTGACCGTTTTGGTCGGGTAT
Locus tag: VIBHAR_01054
Name: iscR
Funciton: Iron-sulfur cluster regulator IscR
Locus tag: VIBHAR_01055
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: VIBHAR_01056
Name: iscU
Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: VIBHAR_01057
Name: iscA
Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: VIBHAR_01058
Name: hscB
Funciton: Chaperone protein HscB
Locus tag: VIBHAR_01059
Name: hscA
Funciton: Chaperone protein HscA
Locus tag: VIBHAR_01060
Name: fdx
Funciton: ferredoxin, 2Fe-2S type, ISC system
Locus tag: VIBHAR_01061
Name: yfhJ
Funciton: putative Fe-S cluster assembly protein
iscR-iscS-iscU-iscA-hscB-hscA-fdx-yfhJ -93 6.9 ATACCTGACTAAAATAGTCAAATAA VIBHAR_01054
-68 6.7 ATACTTGACCGTTTTGGTCGGGTAT
Vibrio parahaemolyticus RIMD 2210633
Position: -93
Score: 6.49644
Sequence: ATACCTGAGTAATTTAGTCAAATAA
Position: -68
Score: 6.68394
Sequence: ATACTTGACCATTTTACTCGGGTAT
Locus tag: VP0595
Name: iscR
Funciton: Iron-sulfur cluster regulator IscR
Locus tag: VP0596
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: VP0597
Name: iscU
Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: VP0598
Name: iscA
Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: VP0599
Name: hscB
Funciton: Chaperone protein HscB
Locus tag: VP0600
Name: hscA
Funciton: Chaperone protein HscA
Locus tag: VP0601
Name: fdx
Funciton: ferredoxin, 2Fe-2S type, ISC system
Locus tag: VP0602
Name: yfhJ
Funciton: putative Fe-S cluster assembly protein
iscR-iscS-iscU-iscA-hscB-hscA-fdx-yfhJ -93 6.5 ATACCTGAGTAATTTAGTCAAATAA VP0595
-68 6.7 ATACTTGACCATTTTACTCGGGTAT
Vibrio salmonicida LFI1238
Position: -94
Score: 6.69708
Sequence: ATACTTGACTAAAATAGTAGGATAA
Position: -69
Score: 7.18734
Sequence: ATACTTGACCAAAATGGTCAGGTAT
Locus tag: VSAL_I0716
Name: iscR
Funciton: Iron-sulfur cluster regulator IscR
Locus tag: VSAL_I0717
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: VSAL_I0718
Name: iscU
Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: VSAL_I0719
Name: iscA
Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: VSAL_I0720
Name: hscB
Funciton: Chaperone protein HscB
Locus tag: VSAL_I0721
Name: hscA
Funciton: Chaperone protein HscA
Locus tag: VSAL_I0722
Name: fdx
Funciton: ferredoxin, 2Fe-2S type, ISC system
Locus tag: VSAL_I0723
Name: yfhJ
Funciton: putative Fe-S cluster assembly protein
iscR-iscS-iscU-iscA-hscB-hscA-fdx-yfhJ -94 6.7 ATACTTGACTAAAATAGTAGGATAA VSAL_I0716
-69 7.2 ATACTTGACCAAAATGGTCAGGTAT
Vibrio shilonii AK1
Position: -91
Score: 6.70813
Sequence: ATACCTGACTATTTTAGTCAAATAA
Position: -66
Score: 7.04713
Sequence: ATACTTGATTAAAATAGTCAGGTAT
Locus tag: VSAK1_12120
Name: iscR
Funciton: Iron-sulfur cluster regulator IscR
Locus tag: VSAK1_12115
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: VSAK1_12110
Name: iscU
Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: VSAK1_12105
Name: iscA
Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: VSAK1_12100
Name: hscB
Funciton: Chaperone protein HscB
Locus tag: VSAK1_12095
Name: hscA
Funciton: Chaperone protein HscA
Locus tag: VSAK1_12090
Name: fdx
Funciton: ferredoxin, 2Fe-2S type, ISC system
Locus tag: VSAK1_12085
Name: yfhJ
Funciton: putative Fe-S cluster assembly protein
iscR-iscS-iscU-iscA-hscB-hscA-fdx-yfhJ -91 6.7 ATACCTGACTATTTTAGTCAAATAA VSAK1_12120
-66 7 ATACTTGATTAAAATAGTCAGGTAT
Vibrio splendidus LGP32
Position: -92
Score: 6.65696
Sequence: ATACCTGACTAAAATAGTCAACTAA
Position: -67
Score: 7.20203
Sequence: ATACTTGACCAATTTAGTCGGGTAT
Locus tag: VS_0606
Name: iscR
Funciton: Iron-sulfur cluster regulator IscR
Locus tag: VS_0607
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: VS_0608
Name: iscU
Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: VS_0609
Name: iscA
Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: VS_0610
Name: hscB
Funciton: Chaperone protein HscB
Locus tag: VS_0611
Name: hscA
Funciton: Chaperone protein HscA
Locus tag: VS_0612
Name: fdx
Funciton: ferredoxin, 2Fe-2S type, ISC system
Locus tag: VS_0613
Name: yfhJ
Funciton: putative Fe-S cluster assembly protein
iscR-iscS-iscU-iscA-hscB-hscA-fdx-yfhJ -92 6.7 ATACCTGACTAAAATAGTCAACTAA VS_0606
-67 7.2 ATACTTGACCAATTTAGTCGGGTAT
Vibrio vulnificus CMCP6
Position: -93
Score: 6.70813
Sequence: ATACCTGACTATTTTAGTCAAATAA
Position: -68
Score: 7.02961
Sequence: ATACTTGACCATTTTGGTCAGGTAT
Locus tag: VV1_0439
Name: iscR
Funciton: Iron-sulfur cluster regulator IscR
Locus tag: VV1_0438
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: VV1_0437
Name: iscU
Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: VV1_0436
Name: iscA
Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: VV1_0435
Name: hscB
Funciton: Chaperone protein HscB
Locus tag: VV1_0434
Name: hscA
Funciton: Chaperone protein HscA
Locus tag: VV1_0433
Name: fdx
Funciton: ferredoxin, 2Fe-2S type, ISC system
Locus tag: VV1_0432
Name: yfhJ
Funciton: putative Fe-S cluster assembly protein
iscR-iscS-iscU-iscA-hscB-hscA-fdx-yfhJ -93 6.7 ATACCTGACTATTTTAGTCAAATAA VV1_0439
-68 7 ATACTTGACCATTTTGGTCAGGTAT
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