Orthologous regulated operons containing liuA gene
| Regulog: | LiuQ - Comamonadaceae |
| Regulator type: | Transcription factor |
| Regulator family: | TetR |
| Regulation mode: | repressor |
| Biological process: | Branched-chain amino acid degradation |
| Effector: | |
| Phylum: | Proteobacteria/beta |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Leptothrix cholodnii SP-6 | ||||
|
Position: -175
Score: 5.54039 Sequence: TTGAGTATCACTCAA
Position: -62
Score: 4.988 Sequence: TTGAGTAAAGCTCAT
Locus tag: Lcho_2119
Name: liuA Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Locus tag: Lcho_2118
Name: liuB Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
Locus tag: Lcho_2117
Name: liuC Funciton: Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
Locus tag: Lcho_2116
Name: liuD Funciton: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
Locus tag: Lcho_2115
Name: liuE Funciton: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) |
||||
| liuA-liuB-liuC-liuD-liuE | -175 | 5.5 | TTGAGTATCACTCAA | Lcho_2119 |
| -62 | 5 | TTGAGTAAAGCTCAT | ||
| Methylibium petroleiphilum PM1 | ||||
|
Position: -114
Score: 5.36516 Sequence: TTGAGTAAAGCTCAA
Position: -13
Score: 5.1281 Sequence: TTGAGTGAAACTCAT
Locus tag: Mpe_A3360
Name: liuA Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Locus tag: Mpe_A3359
Name: liuB Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
Locus tag: Mpe_A3358
Name: liuC Funciton: Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
Locus tag: Mpe_A3357
Name: null Funciton: Probable transmembrane protein
Locus tag: Mpe_A3356
Name: liuD Funciton: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4) |
||||
| liuA-liuB-liuC-Mpe_A3357-liuD | -114 | 5.4 | TTGAGTAAAGCTCAA | Mpe_A3360 |
| -13 | 5.1 | TTGAGTGAAACTCAT | ||