Orthologous regulated operons containing ruvC gene
Regulog: | LexA - Rhizobiales |
Regulator type: | Transcription factor |
Regulator family: | LexA |
Regulation mode: | repressor |
Biological process: | SOS response |
Effector: | DNA damage |
Phylum: | Proteobacteria/alpha |
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Operon | Position | Score | Sequence | Locus Tag of the First Gene |
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Agrobacterium tumefaciens str. C58 (Cereon) | ||||
Position: -58
Score: 5.04903 Sequence: GTTGTCGTTTTGTTC
Locus tag: Atu3724
Name: ruvC Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
Locus tag: Atu3723
Name: ruvA Funciton: Holliday junction DNA helicase RuvA
Locus tag: Atu3722
Name: ruvB Funciton: Holliday junction DNA helicase RuvB |
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ruvC-ruvA-ruvB | -58 | 5 | GTTGTCGTTTTGTTC | Atu3724 |
Bradyrhizobium japonicum USDA 110 | ||||
Position: -47
Score: 4.64758 Sequence: GTTCTGTTTCTGTTT
Locus tag: blr1535
Name: ruvC Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
Locus tag: blr1536
Name: ruvA Funciton: Holliday junction DNA helicase RuvA
Locus tag: blr1537
Name: ruvB Funciton: Holliday junction DNA helicase RuvB |
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ruvC-ruvA-ruvB | -47 | 4.6 | GTTCTGTTTCTGTTT | blr1535 |
Bradyrhizobium sp. BTAi1 | ||||
Position: -47
Score: 4.63003 Sequence: GTTCCGTTTATGTTT
Locus tag: BBta_6909
Name: ruvC Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
Locus tag: BBta_6908
Name: ruvA Funciton: Holliday junction DNA helicase RuvA
Locus tag: BBta_6907
Name: cdd Funciton: Cytidine deaminase (EC 3.5.4.5)
Locus tag: BBta_6906
Name: ruvB Funciton: Holliday junction DNA helicase RuvB |
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ruvC-ruvA-cdd-ruvB | -47 | 4.6 | GTTCCGTTTATGTTT | BBta_6909 |
Brucella melitensis 16M | ||||
Position: -60
Score: 5.07514 Sequence: GTTTCTCTTTTGTTC
Locus tag: BMEI0332
Name: ruvC Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
Locus tag: BMEI0333
Name: ruvA Funciton: Holliday junction DNA helicase RuvA
Locus tag: BMEI0334
Name: ruvB Funciton: Holliday junction DNA helicase RuvB |
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ruvC-ruvA-ruvB | -60 | 5.1 | GTTTCTCTTTTGTTC | BMEI0332 |
Mesorhizobium loti MAFF303099 | ||||
Position: -58
Score: 4.7877 Sequence: GTTTCCGGTTTGTTC
Locus tag: mll3901
Name: ruvC Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) |
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ruvC | -58 | 4.8 | GTTTCCGGTTTGTTC | mll3901 |
Rhizobium etli CFN 42 | ||||
Position: -59
Score: 5.40566 Sequence: GTTTTTGTTTTGTTC
Locus tag: RHE_CH03478
Name: ruvC Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) |
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ruvC | -59 | 5.4 | GTTTTTGTTTTGTTC | RHE_CH03478 |
Rhizobium leguminosarum bv. viciae 3841 | ||||
Position: -58
Score: 5.40566 Sequence: GTTTTTGTTTTGTTC
Locus tag: RL3986
Name: ruvC Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) |
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ruvC | -58 | 5.4 | GTTTTTGTTTTGTTC | RL3986 |
Rhizobium sp. NGR234 | ||||
Position: -58
Score: 5.40566 Sequence: GTTTTTGTTTTGTTC
Locus tag: NGR_c27930
Name: ruvC Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) |
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ruvC | -58 | 5.4 | GTTTTTGTTTTGTTC | NGR_c27930 |
Rhodopseudomonas palustris CGA009 | ||||
Position: -44
Score: 4.4693 Sequence: GTTGCTATTTTGTTC
Locus tag: RPA1099
Name: ruvC Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
Locus tag: RPA1100
Name: ruvA Funciton: Holliday junction DNA helicase RuvA
Locus tag: RPA1101
Name: cdd Funciton: Cytidine deaminase (EC 3.5.4.5)
Locus tag: RPA1102
Name: ruvB Funciton: Holliday junction DNA helicase RuvB |
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ruvC-ruvA-cdd-ruvB | -44 | 4.5 | GTTGCTATTTTGTTC | RPA1099 |
Sinorhizobium meliloti 1021 | ||||
Position: -58
Score: 5.40566 Sequence: GTTTTTGTTTTGTTC
Locus tag: SMc03967
Name: ruvC Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
Locus tag: SMc03966
Name: ruvA Funciton: Holliday junction DNA helicase RuvA
Locus tag: SMc03965
Name: ruvB Funciton: Holliday junction DNA helicase RuvB |
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ruvC-ruvA-ruvB | -58 | 5.4 | GTTTTTGTTTTGTTC | SMc03967 |