Orthologous regulated operons containing ivdA gene

Properties
Regulog:	LiuR - Various betaproteobacteria
Regulator type:	Transcription factor
Regulator family:	MerR
Regulation mode:	repressor
Biological process:	Branched-chain amino acid degradation
Effector:
Phylum:	Proteobacteria/beta

Built upon 31 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Chromobacterium violaceum ATCC 12472
Position: -93 Score: 6.35749 Sequence: CTTGACGTTTACGTCAAC Position: -87 Score: 5.47325 Sequence: GTTTACGTCAACGTCAAC Locus tag: CV2087 Name: liuR Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family Locus tag: CV2088 Name: ivdA Funciton: Acetyl-CoA C-acyltransferase (EC 2.3.1.16)
liuR-ivdA	-93	6.4	CTTGACGTTTACGTCAAC	CV2087
	-87	5.5	GTTTACGTCAACGTCAAC
Dechloromonas aromatica RCB
Position: -51 Score: 6.54321 Sequence: GTTGACGTTAACGTAAAC Position: -45 Score: 5.4159 Sequence: GTTAACGTAAACGTAAAT Locus tag: Daro_0101 Name: paaI Funciton: Phenylacetic acid degradation-related protein Locus tag: Daro_0100 Name: liuA Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10) Locus tag: Daro_0099 Name: cah Funciton: Carbonic anhydrase (EC 4.2.1.1) Locus tag: Daro_0098 Name: ivdA Funciton: Acetyl-CoA C-acyltransferase (EC 2.3.1.16) Locus tag: Daro_0097 Name: null Funciton: Permease of the drug/metabolite transporter (DMT) superfamily Locus tag: Daro_0096 Name: ivdC Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2) Locus tag: Daro_0095 Name: null Funciton: Protein of unknown function DUF88 Locus tag: Daro_0094 Name: null Funciton: 2-hydroxychromene-2-carboxylate isomerase Locus tag: Daro_0093 Name: null Funciton: Lysine decarboxylase family Locus tag: Daro_0092 Name: liuB Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4) Locus tag: Daro_0091 Name: null Funciton: Transcriptional regulator Locus tag: Daro_0090 Name: liuC Funciton: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) Locus tag: Daro_0089 Name: liuD Funciton: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4) Locus tag: Daro_0088 Name: null Funciton: 5-enolpyruvylshikimate-3-phosphate synthase Locus tag: Daro_0087 Name: fabG Funciton: 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) Locus tag: Daro_0086 Name: liuE Funciton: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)
paaI-liuA-cah-ivdA-Daro_0097-ivdC-Daro_0095-Daro_0094-Daro_0093-liuB-Daro_0091-liuC-liuD-Daro_0088-fabG-liuE	-51	6.5	GTTGACGTTAACGTAAAC	Daro_0101
	-45	5.4	GTTAACGTAAACGTAAAT
Laribacter hongkongensis HLHK9
Position: -116 Score: 5.59504 Sequence: ATATACGTTTACGTTAAC Position: -110 Score: 5.66139 Sequence: GTTTACGTTAACGTCAAT Position: -33 Score: 5.10584 Sequence: GTTTCCGTTTACGTAAAA Locus tag: LHK_00207 Name: liuR Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family Locus tag: LHK_00206 Name: ivdA Funciton: Acetyl-CoA C-acyltransferase (EC 2.3.1.16)
liuR-ivdA	-116	5.6	ATATACGTTTACGTTAAC	LHK_00207
	-110	5.7	GTTTACGTTAACGTCAAT
	-33	5.1	GTTTCCGTTTACGTAAAA
Thauera sp. MZ1T
Position: -59 Score: 5.5039 Sequence: GATTACGTTAACGTTAAC Locus tag: Tmz1t_0730 Name: paaI Funciton: Phenylacetic acid degradation-related protein Locus tag: Tmz1t_0731 Name: cah Funciton: Carbonic anhydrase (EC 4.2.1.1) Locus tag: Tmz1t_0732 Name: ivdA Funciton: Acetyl-CoA C-acyltransferase (EC 2.3.1.16) Locus tag: Tmz1t_0733 Name: ivdC Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
paaI-cah-ivdA-ivdC	-59	5.5	GATTACGTTAACGTTAAC	Tmz1t_0730