Orthologous regulated operons containing liuD gene
| Regulog: | LiuR - Various betaproteobacteria |
| Regulator type: | Transcription factor |
| Regulator family: | MerR |
| Regulation mode: | repressor |
| Biological process: | Branched-chain amino acid degradation |
| Effector: | |
| Phylum: | Proteobacteria/beta |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Chromobacterium violaceum ATCC 12472 | ||||
|
Position: -80
Score: 6.45935 Sequence: ATTGACGCTTACGTAAAC
Position: -74
Score: 5.25036 Sequence: GCTTACGTAAACGTAAGC
Locus tag: CV1766
Name: liuA Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10)
Locus tag: CV1765
Name: null Funciton: hypothetical protein
Locus tag: CV1764
Name: liuB Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
Locus tag: CV1763
Name: liuC Funciton: Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
Locus tag: CV1762
Name: liuD Funciton: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
Locus tag: CV1761
Name: null Funciton: FOG: TPR repeat protein
Locus tag: CV1760
Name: null Funciton: probable transcriptional regulator (AraC/XylS family)
Locus tag: CV1759
Name: liuE Funciton: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)
Locus tag: CV1758
Name: aacS Funciton: Acetoacetyl-CoA synthetase [leucine] (EC 6.2.1.16) |
||||
| liuA-CV1765-liuB-liuC-liuD-CV1761-CV1760-liuE-aacS | -80 | 6.5 | ATTGACGCTTACGTAAAC | CV1766 |
| -74 | 5.3 | GCTTACGTAAACGTAAGC | ||
| Dechloromonas aromatica RCB | ||||
|
Position: -51
Score: 6.54321 Sequence: GTTGACGTTAACGTAAAC
Position: -45
Score: 5.4159 Sequence: GTTAACGTAAACGTAAAT
Locus tag: Daro_0101
Name: paaI Funciton: Phenylacetic acid degradation-related protein
Locus tag: Daro_0100
Name: liuA Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10)
Locus tag: Daro_0099
Name: cah Funciton: Carbonic anhydrase (EC 4.2.1.1)
Locus tag: Daro_0098
Name: ivdA Funciton: Acetyl-CoA C-acyltransferase (EC 2.3.1.16)
Locus tag: Daro_0097
Name: null Funciton: Permease of the drug/metabolite transporter (DMT) superfamily
Locus tag: Daro_0096
Name: ivdC Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Locus tag: Daro_0095
Name: null Funciton: Protein of unknown function DUF88
Locus tag: Daro_0094
Name: null Funciton: 2-hydroxychromene-2-carboxylate isomerase
Locus tag: Daro_0093
Name: null Funciton: Lysine decarboxylase family
Locus tag: Daro_0092
Name: liuB Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
Locus tag: Daro_0091
Name: null Funciton: Transcriptional regulator
Locus tag: Daro_0090
Name: liuC Funciton: Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
Locus tag: Daro_0089
Name: liuD Funciton: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
Locus tag: Daro_0088
Name: null Funciton: 5-enolpyruvylshikimate-3-phosphate synthase
Locus tag: Daro_0087
Name: fabG Funciton: 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)
Locus tag: Daro_0086
Name: liuE Funciton: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) |
||||
| paaI-liuA-cah-ivdA-Daro_0097-ivdC-Daro_0095-Daro_0094-Daro_0093-liuB-Daro_0091-liuC-liuD-Daro_0088-fabG-liuE | -51 | 6.5 | GTTGACGTTAACGTAAAC | Daro_0101 |
| -45 | 5.4 | GTTAACGTAAACGTAAAT | ||