Orthologous regulated operons containing ivdB gene

Properties
Regulog:	LiuR - Various betaproteobacteria
Regulator type:	Transcription factor
Regulator family:	MerR
Regulation mode:	repressor
Biological process:	Branched-chain amino acid degradation
Effector:
Phylum:	Proteobacteria/beta

Built upon 31 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Chromobacterium violaceum ATCC 12472
Position: -66 Score: 6.08613 Sequence: GTTGACGTTGACGTAAAC Position: -60 Score: 5.46161 Sequence: GTTGACGTAAACGTCAAG Locus tag: CV2086 Name: ivdG Funciton: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157) Locus tag: CV2085 Name: ivdB Funciton: Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) Locus tag: CV2084 Name: ivdC Funciton: Branched-chain acyl-CoA dehydrogenase (EC 1.3.99.12) Locus tag: CV2083 Name: ivdE Funciton: Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17) Locus tag: CV2082 Name: ivdD Funciton: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) Locus tag: CV2081 Name: ivdF Funciton: 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31)
ivdG-ivdB-ivdC-ivdE-ivdD-ivdF	-66	6.1	GTTGACGTTGACGTAAAC	CV2086
	-60	5.5	GTTGACGTAAACGTCAAG
Laribacter hongkongensis HLHK9
Position: -62 Score: 5.39433 Sequence: GTTTACGTTCACGTAAAT Locus tag: LHK_00209 Name: lcfA Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Locus tag: LHK_00210 Name: livG Funciton: Branched-chain amino acid ABC transport system, ATP-binding protein LivG Locus tag: LHK_00211 Name: livH Funciton: Branched-chain amino acid ABC transport system, permease protein LivH Locus tag: LHK_00212 Name: livM Funciton: Branched-chain amino acid ABC transport system, permease protein LivM Locus tag: LHK_00213 Name: livK Funciton: Branched-chain amino acid ABC transport system, substrate-binding protein LivK Locus tag: LHK_00214 Name: livF Funciton: Branched-chain amino acid ABC transport system, ATP-binding protein LivF Locus tag: LHK_00215 Name: paaK Funciton: Putative phenylacetate-CoA ligase Locus tag: LHK_00216 Name: ivdB Funciton: Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) Locus tag: LHK_00217 Name: ivdC Funciton: Branched-chain acyl-CoA dehydrogenase (EC 1.3.99.12) Locus tag: LHK_00218 Name: ivdE Funciton: Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17) Locus tag: LHK_00219 Name: ivdD Funciton: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) Locus tag: LHK_00220 Name: ivdF Funciton: 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31)
lcfA-livG-livH-livM-livK-livF-paaK-ivdB-ivdC-ivdE-ivdD-ivdF	-62	5.4	GTTTACGTTCACGTAAAT	LHK_00209