Orthologous regulated operons containing ivdB gene
| Regulog: | LiuR - Various betaproteobacteria |
| Regulator type: | Transcription factor |
| Regulator family: | MerR |
| Regulation mode: | repressor |
| Biological process: | Branched-chain amino acid degradation |
| Effector: | |
| Phylum: | Proteobacteria/beta |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Chromobacterium violaceum ATCC 12472 | ||||
|
Position: -66
Score: 6.08613 Sequence: GTTGACGTTGACGTAAAC
Position: -60
Score: 5.46161 Sequence: GTTGACGTAAACGTCAAG
Locus tag: CV2086
Name: ivdG Funciton: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
Locus tag: CV2085
Name: ivdB Funciton: Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27)
Locus tag: CV2084
Name: ivdC Funciton: Branched-chain acyl-CoA dehydrogenase (EC 1.3.99.12)
Locus tag: CV2083
Name: ivdE Funciton: Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17)
Locus tag: CV2082
Name: ivdD Funciton: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4)
Locus tag: CV2081
Name: ivdF Funciton: 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) |
||||
| ivdG-ivdB-ivdC-ivdE-ivdD-ivdF | -66 | 6.1 | GTTGACGTTGACGTAAAC | CV2086 |
| -60 | 5.5 | GTTGACGTAAACGTCAAG | ||
| Laribacter hongkongensis HLHK9 | ||||
|
Position: -62
Score: 5.39433 Sequence: GTTTACGTTCACGTAAAT
Locus tag: LHK_00209
Name: lcfA Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Locus tag: LHK_00210
Name: livG Funciton: Branched-chain amino acid ABC transport system, ATP-binding protein LivG
Locus tag: LHK_00211
Name: livH Funciton: Branched-chain amino acid ABC transport system, permease protein LivH
Locus tag: LHK_00212
Name: livM Funciton: Branched-chain amino acid ABC transport system, permease protein LivM
Locus tag: LHK_00213
Name: livK Funciton: Branched-chain amino acid ABC transport system, substrate-binding protein LivK
Locus tag: LHK_00214
Name: livF Funciton: Branched-chain amino acid ABC transport system, ATP-binding protein LivF
Locus tag: LHK_00215
Name: paaK Funciton: Putative phenylacetate-CoA ligase
Locus tag: LHK_00216
Name: ivdB Funciton: Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27)
Locus tag: LHK_00217
Name: ivdC Funciton: Branched-chain acyl-CoA dehydrogenase (EC 1.3.99.12)
Locus tag: LHK_00218
Name: ivdE Funciton: Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17)
Locus tag: LHK_00219
Name: ivdD Funciton: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4)
Locus tag: LHK_00220
Name: ivdF Funciton: 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) |
||||
| lcfA-livG-livH-livM-livK-livF-paaK-ivdB-ivdC-ivdE-ivdD-ivdF | -62 | 5.4 | GTTTACGTTCACGTAAAT | LHK_00209 |