Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing liuR gene

Properties
Regulog: LiuR - Comamonadaceae
Regulator type: Transcription factor
Regulator family: MerR
Regulation mode: repressor
Biological process: Branched-chain amino acid degradation
Effector:
Phylum: Proteobacteria/beta
Built upon 59 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Acidovorax avenae subsp. citrulli AAC00-1
Position: -70
Score: 4.92901
Sequence: ATTGACGTGCGCGTCAAC
Locus tag: Aave_4372
Name: liuR
Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
liuR -70 4.9 ATTGACGTGCGCGTCAAC Aave_4372
Acidovorax sp. JS42
Position: -59
Score: 5.95145
Sequence: ATTGACGTTCACGTCAAC
Locus tag: Ajs_3780
Name: liuR
Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
liuR -59 6 ATTGACGTTCACGTCAAC Ajs_3780
Comamonas testosteroni KF-1
Position: -74
Score: 6.59853
Sequence: ATTGACGTTAACGTAAAC
Position: -68
Score: 5.01675
Sequence: GTTAACGTAAACGTCAGT
Locus tag: CtesDRAFT_4404
Name: liuR
Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
liuR -74 6.6 ATTGACGTTAACGTAAAC CtesDRAFT_4404
-68 5 GTTAACGTAAACGTCAGT
Delftia acidovorans SPH-1
Position: -46
Score: 6.40852
Sequence: ATTGACGTTAACGTCAAC
Locus tag: Daci_5993
Name: liuR
Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
liuR -46 6.4 ATTGACGTTAACGTCAAC Daci_5993
Leptothrix cholodnii SP-6
Position: -73
Score: 5.68149
Sequence: ACTTACGTTTACGTCAAC
Locus tag: Lcho_4201
Name: liuR
Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
liuR -73 5.7 ACTTACGTTTACGTCAAC Lcho_4201
Polaromonas naphthalenivorans CJ2
Position: -86
Score: 6.31154
Sequence: TTTGACGTTTACGTAAAC
Position: -80
Score: 5.12695
Sequence: GTTTACGTAAACGTAAGA
Locus tag: Pnap_0453
Name: liuR
Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
liuR -86 6.3 TTTGACGTTTACGTAAAC Pnap_0453
-80 5.1 GTTTACGTAAACGTAAGA
Polaromonas sp. JS666
Position: -111
Score: 6.31154
Sequence: TTTGACGTTTACGTAAAC
Locus tag: Bpro_4192
Name: liuR
Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
liuR -111 6.3 TTTGACGTTTACGTAAAC Bpro_4192
Rhodoferax ferrireducens DSM 15236
Position: -92
Score: 6.63969
Sequence: ATTGACGTTTACGTAAAC
Position: -86
Score: 5.34588
Sequence: GTTTACGTAAACGTCAAT
Locus tag: Rfer_3843
Name: liuR
Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
Locus tag: Rfer_3842
Name: liuA
Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Locus tag: Rfer_3841
Name: cah
Funciton: Carbonic anhydrase (EC 4.2.1.1)
Locus tag: Rfer_3840
Name: aceK
Funciton: Isocitrate dehydrogenase phosphatase (EC 2.7.11.5)/kinase (EC 3.1.3.-)
Locus tag: Rfer_3839
Name: ivdA
Funciton: Acetyl-CoA C-acyltransferase (EC 2.3.1.16)
Locus tag: Rfer_3838
Name: ivdC
Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
liuR-liuA-cah-aceK-ivdA-ivdC -92 6.6 ATTGACGTTTACGTAAAC Rfer_3843
-86 5.3 GTTTACGTAAACGTCAAT
Variovorax paradoxus S110
Position: -115
Score: 6.63969
Sequence: ATTGACGTTTACGTAAAC
Locus tag: Vapar_4735
Name: liuR
Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
Locus tag: Vapar_4734
Name: cah
Funciton: Carbonic anhydrase (EC 4.2.1.1)
Locus tag: Vapar_4733
Name: aceK
Funciton: Isocitrate dehydrogenase phosphatase (EC 2.7.11.5)/kinase (EC 3.1.3.-)
Locus tag: Vapar_4732
Name: ivdA
Funciton: Acetyl-CoA C-acyltransferase (EC 2.3.1.16)
Locus tag: Vapar_4731
Name: null
Funciton: peptidase M20
Locus tag: Vapar_4730
Name: ivdC
Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
liuR-cah-aceK-ivdA-Vapar_4731-ivdC -115 6.6 ATTGACGTTTACGTAAAC Vapar_4735
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