Orthologous regulated operons containing paaH gene
| Regulog: | LiuR - Comamonadaceae |
| Regulator type: | Transcription factor |
| Regulator family: | MerR |
| Regulation mode: | repressor |
| Biological process: | Branched-chain amino acid degradation |
| Effector: | |
| Phylum: | Proteobacteria/beta |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Acidovorax avenae subsp. citrulli AAC00-1 | ||||
|
Position: -42
Score: 6.44968 Sequence: ATTGACGTTTACGTCAAC
Locus tag: Aave_2867
Name: paaH Funciton: 3-hydroxyacyl-CoA dehydrogenase |
||||
| paaH | -42 | 6.4 | ATTGACGTTTACGTCAAC | Aave_2867 |
| Acidovorax sp. JS42 | ||||
|
Position: -37
Score: 6.062 Sequence: ATTAACGTTTACGTTAAC
Position: -31
Score: 5.29952 Sequence: GTTTACGTTAACGTAACT
Locus tag: Ajs_1606
Name: paaH Funciton: 3-hydroxyacyl-CoA dehydrogenase |
||||
| paaH | -37 | 6.1 | ATTAACGTTTACGTTAAC | Ajs_1606 |
| -31 | 5.3 | GTTTACGTTAACGTAACT | ||
| Comamonas testosteroni KF-1 | ||||
|
Position: -48
Score: 6.44968 Sequence: ATTGACGTTTACGTCAAC
Position: -42
Score: 5.09697 Sequence: GTTTACGTCAACGTCAAT
Locus tag: CtesDRAFT_5453
Name: paaH Funciton: 3-hydroxyacyl-CoA dehydrogenase |
||||
| paaH | -48 | 6.4 | ATTGACGTTTACGTCAAC | CtesDRAFT_5453 |
| -42 | 5.1 | GTTTACGTCAACGTCAAT | ||
| Delftia acidovorans SPH-1 | ||||
|
Position: -42
Score: 5.55256 Sequence: AGTTACGTTTACGTCAAC
Locus tag: Daci_4744
Name: paaH Funciton: 3-hydroxyacyl-CoA dehydrogenase |
||||
| paaH | -42 | 5.6 | AGTTACGTTTACGTCAAC | Daci_4744 |
| Leptothrix cholodnii SP-6 | ||||
|
Position: -99
Score: 6.44968 Sequence: ATTGACGTTTACGTCAAC
Position: -93
Score: 5.47325 Sequence: GTTTACGTCAACGTCAAC
Locus tag: Lcho_2559
Name: paaH Funciton: 3-hydroxyacyl-CoA dehydrogenase |
||||
| paaH | -99 | 6.4 | ATTGACGTTTACGTCAAC | Lcho_2559 |
| -93 | 5.5 | GTTTACGTCAACGTCAAC | ||
| Polaromonas naphthalenivorans CJ2 | ||||
|
Position: -86
Score: 6.14145 Sequence: ATTGACGTTGACGTAAAC
Position: -80
Score: 5.46161 Sequence: GTTGACGTAAACGTCAAA
Locus tag: Pnap_1609
Name: paaH Funciton: 3-hydroxyacyl-CoA dehydrogenase |
||||
| paaH | -86 | 6.1 | ATTGACGTTGACGTAAAC | Pnap_1609 |
| -80 | 5.5 | GTTGACGTAAACGTCAAA | ||
| Polaromonas sp. JS666 | ||||
|
Position: -69
Score: 6.44968 Sequence: ATTGACGTTTACGTCAAC
Position: -63
Score: 5.47325 Sequence: GTTTACGTCAACGTCAAC
Locus tag: Bpro_3093
Name: paaH Funciton: 3-hydroxyacyl-CoA dehydrogenase |
||||
| paaH | -69 | 6.4 | ATTGACGTTTACGTCAAC | Bpro_3093 |
| -63 | 5.5 | GTTTACGTCAACGTCAAC | ||
| Rhodoferax ferrireducens DSM 15236 | ||||
|
Position: -39
Score: 6.4975 Sequence: ATTGACGTTTACGTTAAC
Position: -33
Score: 5.66139 Sequence: GTTTACGTTAACGTCAAT
Locus tag: Rfer_2204
Name: paaH Funciton: 3-hydroxyacyl-CoA dehydrogenase |
||||
| paaH | -39 | 6.5 | ATTGACGTTTACGTTAAC | Rfer_2204 |
| -33 | 5.7 | GTTTACGTTAACGTCAAT | ||