Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing SO1578 gene

Properties
Regulog: SO1578 - Shewanellaceae
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode: repressor
Biological process: Glutathione metabolism
Effector:
Phylum: Proteobacteria/gamma
Built upon 24 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -103
Score: 6.23463
Sequence: TTATCTGAACGATCGGTTAG
Position: -68
Score: 5.47386
Sequence: ATAACTGAACGAACGGTCAA
Locus tag: Sama_1089
Name: SO1578
Funciton: Transcriptional regulator, TetR family
SO1578 -103 6.2 TTATCTGAACGATCGGTTAG Sama_1089
-68 5.5 ATAACTGAACGAACGGTCAA
Shewanella baltica OS155
Position: -157
Score: 6.63263
Sequence: TTAACGGAACGATCGGTTAG
Position: -122
Score: 4.9936
Sequence: ATATCTAAACGATCAGTCAA
Locus tag: Sbal_1395
Name: SO1578
Funciton: Transcriptional regulator, TetR family
SO1578 -157 6.6 TTAACGGAACGATCGGTTAG Sbal_1395
-122 5 ATATCTAAACGATCAGTCAA
Shewanella loihica PV-4
Position: -101
Score: 5.60527
Sequence: TTAACTGAACGCTCGTTTAG
Position: -66
Score: 6.10063
Sequence: ATAACTGAACGTTCGGTCAA
Locus tag: Shew_2729
Name: SO1578
Funciton: Transcriptional regulator, TetR family
SO1578 -101 5.6 TTAACTGAACGCTCGTTTAG Shew_2729
-66 6.1 ATAACTGAACGTTCGGTCAA
Shewanella oneidensis MR-1
Position: -112
Score: 6.63263
Sequence: TTAACGGAACGATCGGTTAG
Locus tag: SO_1578
Name: SO1578
Funciton: Transcriptional regulator, TetR family
SO1578 -112 6.6 TTAACGGAACGATCGGTTAG SO_1578
Shewanella sp ANA-3
Position: -112
Score: 6.63263
Sequence: TTAACGGAACGATCGGTTAG
Locus tag: Shewana3_2864
Name: SO1578
Funciton: Transcriptional regulator, TetR family
SO1578 -112 6.6 TTAACGGAACGATCGGTTAG Shewana3_2864
Shewanella sp MR-4
Position: -112
Score: 6.63263
Sequence: TTAACGGAACGATCGGTTAG
Locus tag: Shewmr4_2694
Name: SO1578
Funciton: Transcriptional regulator, TetR family
SO1578 -112 6.6 TTAACGGAACGATCGGTTAG Shewmr4_2694
Shewanella sp MR-7
Position: -111
Score: 6.69948
Sequence: TTAACGGAACGTTCGGTTAG
Locus tag: Shewmr7_2762
Name: SO1578
Funciton: Transcriptional regulator, TetR family
SO1578 -111 6.7 TTAACGGAACGTTCGGTTAG Shewmr7_2762
Shewanella woodyi ATCC 51908
Position: -90
Score: 6.57122
Sequence: TTAACTGAACGATCGGTTAG
Position: -55
Score: 4.99894
Sequence: ATAGCTAAACGTTCGGTCAA
Locus tag: Swoo_3433
Name: SO1578
Funciton: Transcriptional regulator, TetR family
SO1578 -90 6.6 TTAACTGAACGATCGGTTAG Swoo_3433
-55 5 ATAGCTAAACGTTCGGTCAA
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