Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing pcaC gene

Properties
Regulog: NmlR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: MerR
Regulation mode: activator
Biological process: Carbonyl stress response
Effector: Diamide
Phylum: Proteobacteria/Gamma
Built upon 5 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella baltica OS155
Position: -58
Score: 7.12785
Sequence: CTTAGAGTTAACTCTAAG
Locus tag: Sbal_4266
Name: pcaC
Funciton: 4-carboxymuconolactone decarboxylase (EC 4.1.1.44)
pcaC -58 7.1 CTTAGAGTTAACTCTAAG Sbal_4266
Shewanella frigidimarina NCIMB 400
Position: -58
Score: 6.81782
Sequence: CTTAGAGTTAACTCTAAC
Locus tag: Sfri_3873
Name: pcaC
Funciton: 4-carboxymuconolactone decarboxylase (EC 4.1.1.44)
pcaC -58 6.8 CTTAGAGTTAACTCTAAC Sfri_3873
Shewanella oneidensis MR-1
Position: -60
Score: 6.81782
Sequence: CTTAGAGCTAACTCTAAG
Locus tag: SO_0083
Name: pcaC
Funciton: 4-carboxymuconolactone decarboxylase (EC 4.1.1.44)
pcaC -60 6.8 CTTAGAGCTAACTCTAAG SO_0083
Shewanella sp MR-4
Position: -57
Score: 6.81782
Sequence: CTTAGAGTGAACTCTAAG
Locus tag: Shewmr4_0089
Name: pcaC
Funciton: 4-carboxymuconolactone decarboxylase (EC 4.1.1.44)
pcaC -57 6.8 CTTAGAGTGAACTCTAAG Shewmr4_0089
Shewanella woodyi ATCC 51908
Position: -57
Score: 7.12785
Sequence: CTTAGAGTTAACTCTAAG
Locus tag: Swoo_4049
Name: pcaC
Funciton: 4-carboxymuconolactone decarboxylase (EC 4.1.1.44)
pcaC -57 7.1 CTTAGAGTTAACTCTAAG Swoo_4049
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