Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing nirK gene

Properties
Regulog: Dnr - Shewanellaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: activator
Biological process: Denitrification
Effector: Nitric oxide
Phylum: Proteobacteria/gamma
Built upon 5 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -133
Score: 5.25178
Sequence: AGTTGACTTCCATCAATT
Locus tag: Sama_2681
Name: nirK
Funciton: Copper-containing nitrite reductase (EC 1.7.2.1)
Locus tag: Sama_2682
Name: Sden_3481
Funciton: hypothetical protein
Locus tag: Sama_2683
Name: sco
Funciton: Putative copper metallochaperone, Sco1/SenC/PrrC family
Locus tag: Sama_2684
Name: cox
Funciton: Copper metallochaperone, bacterial analog of Cox17 protein
Locus tag: Sama_2685
Name: Dnr
Funciton: Nitric oxide -responding transcriptional regulator Dnr (Crp/Fnr family)
nirK-Sden_3481-sco-cox-Dnr -133 5.3 AGTTGACTTCCATCAATT Sama_2681
Shewanella denitrificans OS217
Position: -121
Score: 6.07777
Sequence: ACTTGATCTAGGTCAATT
Locus tag: Sden_3482
Name: nirK
Funciton: Copper-containing nitrite reductase (EC 1.7.2.1)
Locus tag: Sden_3481
Name: Sden_3481
Funciton: hypothetical protein
Locus tag: Sden_3480
Name: sco
Funciton: Putative copper metallochaperone, Sco1/SenC/PrrC family
Locus tag: Sden_3479
Name: cox
Funciton: Copper metallochaperone, bacterial analog of Cox17 protein
nirK-Sden_3481-sco-cox -121 6.1 ACTTGATCTAGGTCAATT Sden_3482
Shewanella loihica PV-4
Position: -131
Score: 5.7771
Sequence: ACTTGACCAAAGTCAATT
Locus tag: Shew_3335
Name: nirK
Funciton: Copper-containing nitrite reductase (EC 1.7.2.1)
Locus tag: Shew_3334
Name: Sden_3481
Funciton: hypothetical protein
Locus tag: Shew_3333
Name: sco
Funciton: Putative copper metallochaperone, Sco1/SenC/PrrC family
Locus tag: Shew_3332
Name: cox
Funciton: Copper metallochaperone, bacterial analog of Cox17 protein
Locus tag: Shew_3331
Name: Dnr
Funciton: Nitric oxide -responding transcriptional regulator Dnr (Crp/Fnr family)
nirK-Sden_3481-sco-cox-Dnr -131 5.8 ACTTGACCAAAGTCAATT Shew_3335