Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing SO0312 gene

Properties
Regulog: ArgR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: ArgR
Regulation mode: repressor (activator)
Biological process: Arginine degradation; Arginine biosynthesis
Effector: Arginine
Phylum: Proteobacteria/gamma
Built upon 502 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -179
Score: 4.29149
Sequence: ATCGCATAAAAATACAAT
Position: -52
Score: 4.21577
Sequence: ATTTAATAAATATTGACA
Locus tag: Sama_3334
Name: speF
Funciton: Ornithine decarboxylase (EC 4.1.1.17)
Locus tag: Sama_3335
Name: potE
Funciton: Putrescine/proton symporter, putrescine/ornithine antiporter PotE
Locus tag: Sama_3336
Name: SO0312
Funciton: Predicted outer membrane porin
speF-potE-SO0312 -179 4.3 ATCGCATAAAAATACAAT Sama_3334
-52 4.2 ATTTAATAAATATTGACA
Shewanella baltica OS155
Position: -749
Score: 4.16785
Sequence: TATGCATAACCATGCAGG
Locus tag: Sbal_4084
Name: speF
Funciton: Ornithine decarboxylase (EC 4.1.1.17)
Locus tag: Sbal_4085
Name: potE
Funciton: Putrescine/proton symporter, putrescine/ornithine antiporter PotE
Locus tag: Sbal_4086
Name: SO0312
Funciton: Predicted outer membrane porin
speF-potE-SO0312 -749 4.2 TATGCATAACCATGCAGG Sbal_4084
Shewanella oneidensis MR-1
Position: -736
Score: 5.11118
Sequence: TCTGCATTTTTATGCAAA
Locus tag: SO_0314
Name: speF
Funciton: Ornithine decarboxylase (EC 4.1.1.17)
Locus tag: SO_0313
Name: potE
Funciton: Putrescine/proton symporter, putrescine/ornithine antiporter PotE
Locus tag: SO_0312
Name: SO0312
Funciton: Predicted outer membrane porin
speF-potE-SO0312 -736 5.1 TCTGCATTTTTATGCAAA SO_0314
Shewanella putrefaciens CN-32
Position: -754
Score: 4.87035
Sequence: TATGCATAACAATTCAAA
Locus tag: Sputcn32_3679
Name: speF
Funciton: Ornithine decarboxylase (EC 4.1.1.17)
Locus tag: Sputcn32_3680
Name: potE
Funciton: Putrescine/proton symporter, putrescine/ornithine antiporter PotE
Locus tag: Sputcn32_3681
Name: SO0312
Funciton: Predicted outer membrane porin
speF-potE-SO0312 -754 4.9 TATGCATAACAATTCAAA Sputcn32_3679
Shewanella sp ANA-3
Position: -742
Score: 5.25234
Sequence: TCTGCATTTTTATTCAAA
Locus tag: Shewana3_3871
Name: speF
Funciton: Ornithine decarboxylase (EC 4.1.1.17)
Locus tag: Shewana3_3872
Name: potE
Funciton: Putrescine/proton symporter, putrescine/ornithine antiporter PotE
Locus tag: Shewana3_3873
Name: SO0312
Funciton: Predicted outer membrane porin
speF-potE-SO0312 -742 5.3 TCTGCATTTTTATTCAAA Shewana3_3871
Shewanella sp MR-4
Position: -742
Score: 5.25234
Sequence: TCTGCATTTTTATTCAAA
Locus tag: Shewmr4_3667
Name: speF
Funciton: Ornithine decarboxylase (EC 4.1.1.17)
Locus tag: Shewmr4_3668
Name: potE
Funciton: Putrescine/proton symporter, putrescine/ornithine antiporter PotE
Locus tag: Shewmr4_3669
Name: SO0312
Funciton: Predicted outer membrane porin
speF-potE-SO0312 -742 5.3 TCTGCATTTTTATTCAAA Shewmr4_3667
Shewanella sp MR-7
Position: -741
Score: 4.90211
Sequence: TTTGCATTTTTATGCAAG
Locus tag: Shewmr7_0278
Name: speF
Funciton: Ornithine decarboxylase (EC 4.1.1.17)
Locus tag: Shewmr7_0277
Name: potE
Funciton: Putrescine/proton symporter, putrescine/ornithine antiporter PotE
Locus tag: Shewmr7_0276
Name: SO0312
Funciton: Predicted outer membrane porin
speF-potE-SO0312 -741 4.9 TTTGCATTTTTATGCAAG Shewmr7_0278
Shewanella sp W3-18-1
Position: -852
Score: 4.87035
Sequence: TATGCATAACAATTCAAA
Locus tag: Sputw3181_3820
Name: null
Funciton: Transposase, IS4 family
Locus tag: Sputw3181_3821
Name: speF
Funciton: Ornithine decarboxylase (EC 4.1.1.17)
Locus tag: Sputw3181_3822
Name: potE
Funciton: Putrescine/proton symporter, putrescine/ornithine antiporter PotE
Locus tag: Sputw3181_3823
Name: SO0312
Funciton: Predicted outer membrane porin
Sputw3181_3820-speF-potE-SO0312 -852 4.9 TATGCATAACAATTCAAA Sputw3181_3820
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