Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing SO0620 gene

Properties
Regulog: ArgR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: ArgR
Regulation mode: repressor (activator)
Biological process: Arginine degradation; Arginine biosynthesis
Effector: Arginine
Phylum: Proteobacteria/gamma
Built upon 502 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -308
Score: 3.8392
Sequence: TATGTCTATTTATCCAAT
Position: -247
Score: 4.16318
Sequence: TCTGACTAAATATGCCAT
Locus tag: Sama_3011
Name: astC
Funciton: Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) / Succinylornithine transaminase (EC 2.6.1.81)
Locus tag: Sama_3010
Name: astA
Funciton: Arginine N-succinyltransferase (EC 2.3.1.109)
Locus tag: Sama_3009
Name: astD
Funciton: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71)
Locus tag: Sama_3008
Name: SO0620
Funciton: Conserved hypothetical protein
astC-astA-astD-SO0620 -308 3.8 TATGTCTATTTATCCAAT Sama_3011
-247 4.2 TCTGACTAAATATGCCAT
Shewanella baltica OS155
Position: -247
Score: 3.92601
Sequence: TATGACTAATTATGCTGA
Locus tag: Sbal_0571
Name: astC
Funciton: Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) / Succinylornithine transaminase (EC 2.6.1.81)
Locus tag: Sbal_0572
Name: astA
Funciton: Arginine N-succinyltransferase (EC 2.3.1.109)
Locus tag: Sbal_0573
Name: astD
Funciton: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71)
Locus tag: Sbal_0574
Name: SO0620
Funciton: Conserved hypothetical protein
astC-astA-astD-SO0620 -247 3.9 TATGACTAATTATGCTGA Sbal_0571
Shewanella frigidimarina NCIMB 400
Position: -301
Score: 4.35816
Sequence: TATGTGTAATTATTCACT
Position: -241
Score: 3.90693
Sequence: TATGACTATTTATGCTTC
Position: -189
Score: 4.02367
Sequence: TATCAATCTTTATGCAGA
Locus tag: Sfri_3299
Name: astC
Funciton: Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) / Succinylornithine transaminase (EC 2.6.1.81)
Locus tag: Sfri_3298
Name: astA
Funciton: Arginine N-succinyltransferase (EC 2.3.1.109)
Locus tag: Sfri_3297
Name: astD
Funciton: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71)
Locus tag: Sfri_3296
Name: SO0620
Funciton: Conserved hypothetical protein
astC-astA-astD-SO0620 -301 4.4 TATGTGTAATTATTCACT Sfri_3299
-241 3.9 TATGACTATTTATGCTTC
-189 4 TATCAATCTTTATGCAGA
Shewanella halifaxensis HAW-EB4
Position: -242
Score: 4.00074
Sequence: TATGACTATTTATGCTTA
Locus tag: Shal_3610
Name: astC
Funciton: Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) / Succinylornithine transaminase (EC 2.6.1.81)
Locus tag: Shal_3609
Name: astA
Funciton: Arginine N-succinyltransferase (EC 2.3.1.109)
Locus tag: Shal_3608
Name: astD
Funciton: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71)
Locus tag: Shal_3607
Name: SO0620
Funciton: Conserved hypothetical protein
astC-astA-astD-SO0620 -242 4 TATGACTATTTATGCTTA Shal_3610
Shewanella loihica PV-4
Position: -304
Score: 4.97062
Sequence: TGTGACTATATATTCATA
Position: -244
Score: 4.04527
Sequence: TCTGACTATTTATGCTCA
Locus tag: Shew_0578
Name: astC
Funciton: Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) / Succinylornithine transaminase (EC 2.6.1.81)
Locus tag: Shew_0579
Name: astA
Funciton: Arginine N-succinyltransferase (EC 2.3.1.109)
Locus tag: Shew_0580
Name: astD
Funciton: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71)
Locus tag: Shew_0581
Name: SO0620
Funciton: Conserved hypothetical protein
astC-astA-astD-SO0620 -304 5 TGTGACTATATATTCATA Shew_0578
-244 4 TCTGACTATTTATGCTCA
Shewanella oneidensis MR-1
Position: -307
Score: 4.0509
Sequence: ATTGTGTAGTTATTCATA
Position: -247
Score: 4.04527
Sequence: TCTGACTAAATATGCTAA
Locus tag: SO_0617
Name: astC
Funciton: Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) / Succinylornithine transaminase (EC 2.6.1.81)
Locus tag: SO_0618
Name: astA
Funciton: Arginine N-succinyltransferase (EC 2.3.1.109)
Locus tag: SO_0619
Name: astD
Funciton: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71)
Locus tag: SO_0620
Name: SO0620
Funciton: Conserved hypothetical protein
astC-astA-astD-SO0620 -307 4.1 ATTGTGTAGTTATTCATA SO_0617
-247 4 TCTGACTAAATATGCTAA
Shewanella pealeana ATCC 700345
Position: -281
Score: 3.6717
Sequence: CGTGAATAACTAGTAATT
Position: -242
Score: 4.04527
Sequence: TGTGACTATTTATGCTTA
Locus tag: Spea_3516
Name: astC
Funciton: Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) / Succinylornithine transaminase (EC 2.6.1.81)
Locus tag: Spea_3515
Name: astA
Funciton: Arginine N-succinyltransferase (EC 2.3.1.109)
Locus tag: Spea_3514
Name: astD
Funciton: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71)
Locus tag: Spea_3513
Name: SO0620
Funciton: Conserved hypothetical protein
astC-astA-astD-SO0620 -281 3.7 CGTGAATAACTAGTAATT Spea_3516
-242 4 TGTGACTATTTATGCTTA
Shewanella piezotolerans WP3
Position: -244
Score: 4.00074
Sequence: TATGACTAAATATGCTTA
Locus tag: swp_0747
Name: astC
Funciton: Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) / Succinylornithine transaminase (EC 2.6.1.81)
Locus tag: swp_0748
Name: astA
Funciton: Arginine N-succinyltransferase (EC 2.3.1.109)
Locus tag: swp_0749
Name: astD
Funciton: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71)
Locus tag: swp_0750
Name: SO0620
Funciton: Conserved hypothetical protein
astC-astA-astD-SO0620 -244 4 TATGACTAAATATGCTTA swp_0747
Shewanella putrefaciens CN-32
Position: -307
Score: 4.0509
Sequence: ATTGTGTAGTTATTCATA
Position: -247
Score: 3.95146
Sequence: TCTGACTAAATATGCTAC
Locus tag: Sputcn32_0645
Name: astC
Funciton: Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) / Succinylornithine transaminase (EC 2.6.1.81)
Locus tag: Sputcn32_0646
Name: astA
Funciton: Arginine N-succinyltransferase (EC 2.3.1.109)
Locus tag: Sputcn32_0647
Name: astD
Funciton: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71)
Locus tag: Sputcn32_0648
Name: SO0620
Funciton: Conserved hypothetical protein
astC-astA-astD-SO0620 -307 4.1 ATTGTGTAGTTATTCATA Sputcn32_0645
-247 4 TCTGACTAAATATGCTAC
Shewanella sediminis HAW-EB3
Position: -246
Score: 3.92601
Sequence: TATGACTAATTATGCTTA
Locus tag: Ssed_0809
Name: astC
Funciton: Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) / Succinylornithine transaminase (EC 2.6.1.81)
Locus tag: Ssed_0810
Name: astA
Funciton: Arginine N-succinyltransferase (EC 2.3.1.109)
Locus tag: Ssed_0811
Name: astD
Funciton: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71)
Locus tag: Ssed_0812
Name: SO0620
Funciton: Conserved hypothetical protein
astC-astA-astD-SO0620 -246 3.9 TATGACTAATTATGCTTA Ssed_0809
Shewanella sp ANA-3
Position: -307
Score: 4.0509
Sequence: ATTGTGTAGTTATTCATA
Position: -247
Score: 4.04527
Sequence: TCTGACTAAATATGCTAA
Locus tag: Shewana3_0610
Name: astC
Funciton: Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) / Succinylornithine transaminase (EC 2.6.1.81)
Locus tag: Shewana3_0611
Name: astA
Funciton: Arginine N-succinyltransferase (EC 2.3.1.109)
Locus tag: Shewana3_0612
Name: astD
Funciton: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71)
Locus tag: Shewana3_0613
Name: SO0620
Funciton: Conserved hypothetical protein
astC-astA-astD-SO0620 -307 4.1 ATTGTGTAGTTATTCATA Shewana3_0610
-247 4 TCTGACTAAATATGCTAA
Shewanella sp MR-4
Position: -307
Score: 4.0509
Sequence: ATTGTGTAGTTATTCATA
Position: -247
Score: 4.04527
Sequence: TCTGACTAAATATGCTAA
Locus tag: Shewmr4_0611
Name: astC
Funciton: Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) / Succinylornithine transaminase (EC 2.6.1.81)
Locus tag: Shewmr4_0612
Name: astA
Funciton: Arginine N-succinyltransferase (EC 2.3.1.109)
Locus tag: Shewmr4_0613
Name: astD
Funciton: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71)
Locus tag: Shewmr4_0614
Name: SO0620
Funciton: Conserved hypothetical protein
astC-astA-astD-SO0620 -307 4.1 ATTGTGTAGTTATTCATA Shewmr4_0611
-247 4 TCTGACTAAATATGCTAA
Shewanella sp MR-7
Position: -307
Score: 4.0509
Sequence: ATTGTGTAGTTATTCATA
Position: -247
Score: 4.04527
Sequence: TCTGACTAAATATGCTAA
Locus tag: Shewmr7_3419
Name: astC
Funciton: Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) / Succinylornithine transaminase (EC 2.6.1.81)
Locus tag: Shewmr7_3418
Name: astA
Funciton: Arginine N-succinyltransferase (EC 2.3.1.109)
Locus tag: Shewmr7_3417
Name: astD
Funciton: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71)
Locus tag: Shewmr7_3416
Name: SO0620
Funciton: Conserved hypothetical protein
astC-astA-astD-SO0620 -307 4.1 ATTGTGTAGTTATTCATA Shewmr7_3419
-247 4 TCTGACTAAATATGCTAA
Shewanella sp W3-18-1
Position: -307
Score: 4.0509
Sequence: ATTGTGTAGTTATTCATA
Position: -247
Score: 3.95146
Sequence: TCTGACTAAATATGCTAC
Locus tag: Sputw3181_3529
Name: astC
Funciton: Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) / Succinylornithine transaminase (EC 2.6.1.81)
Locus tag: Sputw3181_3528
Name: astA
Funciton: Arginine N-succinyltransferase (EC 2.3.1.109)
Locus tag: Sputw3181_3527
Name: astD
Funciton: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71)
Locus tag: Sputw3181_3526
Name: SO0620
Funciton: Conserved hypothetical protein
astC-astA-astD-SO0620 -307 4.1 ATTGTGTAGTTATTCATA Sputw3181_3529
-247 4 TCTGACTAAATATGCTAC
Shewanella woodyi ATCC 51908
Position: -245
Score: 4.16318
Sequence: TATGACTAAATATGCTCT
Locus tag: Swoo_0655
Name: astC
Funciton: Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) / Succinylornithine transaminase (EC 2.6.1.81)
Locus tag: Swoo_0656
Name: astA
Funciton: Arginine N-succinyltransferase (EC 2.3.1.109)
Locus tag: Swoo_0657
Name: astD
Funciton: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71)
Locus tag: Swoo_0658
Name: SO0620
Funciton: Conserved hypothetical protein
astC-astA-astD-SO0620 -245 4.2 TATGACTAAATATGCTCT Swoo_0655
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