Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing oadB gene

Properties
Regulog: ArgR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: ArgR
Regulation mode: repressor (activator)
Biological process: Arginine degradation; Arginine biosynthesis
Effector: Arginine
Phylum: Proteobacteria/gamma
Built upon 502 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -352
Score: 4.06143
Sequence: ACTGCATATACTTCCACT
Position: -307
Score: 3.59421
Sequence: TCTGCCCATGAATGCAGT
Locus tag: Sama_1051
Name: oadG
Funciton: Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3)
Locus tag: Sama_1052
Name: oadA
Funciton: Oxaloacetate decarboxylase, alpha chain (EC 4.1.1.3)
Locus tag: Sama_1053
Name: oadB
Funciton: Oxaloacetate decarboxylase, beta chain (EC 4.1.1.3)
oadG-oadA-oadB -352 4.1 ACTGCATATACTTCCACT Sama_1051
-307 3.6 TCTGCCCATGAATGCAGT
Shewanella baltica OS155
Position: -139
Score: 4.92952
Sequence: TGTGATTTTTTATTCAAA
Locus tag: Sbal_1024
Name: oadG
Funciton: Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3)
Locus tag: Sbal_1025
Name: oadA
Funciton: Oxaloacetate decarboxylase, alpha chain (EC 4.1.1.3)
Locus tag: Sbal_1026
Name: oadB
Funciton: Oxaloacetate decarboxylase, beta chain (EC 4.1.1.3)
oadG-oadA-oadB -139 4.9 TGTGATTTTTTATTCAAA Sbal_1024
Shewanella frigidimarina NCIMB 400
Position: -182
Score: 3.77778
Sequence: GTTGAATAATCGTTGAGT
Position: -165
Score: 4.6225
Sequence: TTTGAATATTTATGCTTT
Locus tag: Sfri_1065
Name: oadG
Funciton: Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3)
Locus tag: Sfri_1066
Name: oadA
Funciton: Oxaloacetate decarboxylase, alpha chain (EC 4.1.1.3)
Locus tag: Sfri_1067
Name: oadB
Funciton: Oxaloacetate decarboxylase, beta chain (EC 4.1.1.3)
oadG-oadA-oadB -182 3.8 GTTGAATAATCGTTGAGT Sfri_1065
-165 4.6 TTTGAATATTTATGCTTT
Shewanella halifaxensis HAW-EB4
Position: -63
Score: 4.78395
Sequence: GGTGAATATTTATTGAGT
Position: -43
Score: 4.14016
Sequence: CATCCATGTTTATTCACA
Locus tag: Shal_1235
Name: oadG
Funciton: Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3)
Locus tag: Shal_1236
Name: oadA
Funciton: Oxaloacetate decarboxylase, alpha chain (EC 4.1.1.3)
Locus tag: Shal_1237
Name: oadB
Funciton: Oxaloacetate decarboxylase, beta chain (EC 4.1.1.3)
oadG-oadA-oadB -63 4.8 GGTGAATATTTATTGAGT Shal_1235
-43 4.1 CATCCATGTTTATTCACA
Shewanella loihica PV-4
Position: -377
Score: 4.29578
Sequence: ATTGCATAATCTTGCATA
Position: -331
Score: 4.04144
Sequence: ATTCAATTTTCAAGCAGA
Locus tag: Shew_1219
Name: oadG
Funciton: Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3)
Locus tag: Shew_1220
Name: oadA
Funciton: Oxaloacetate decarboxylase, alpha chain (EC 4.1.1.3)
Locus tag: Shew_1221
Name: oadB
Funciton: Oxaloacetate decarboxylase, beta chain (EC 4.1.1.3)
oadG-oadA-oadB -377 4.3 ATTGCATAATCTTGCATA Shew_1219
-331 4 ATTCAATTTTCAAGCAGA
Shewanella pealeana ATCC 700345
Position: -73
Score: 4.23804
Sequence: TGTGAATGAATAGTGAAT
Position: -62
Score: 4.05714
Sequence: AGTGAATATTTATTTTTA
Locus tag: Spea_1198
Name: oadG
Funciton: Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3)
Locus tag: Spea_1199
Name: oadA
Funciton: Oxaloacetate decarboxylase, alpha chain (EC 4.1.1.3)
Locus tag: Spea_1200
Name: oadB
Funciton: Oxaloacetate decarboxylase, beta chain (EC 4.1.1.3)
oadG-oadA-oadB -73 4.2 TGTGAATGAATAGTGAAT Spea_1198
-62 4.1 AGTGAATATTTATTTTTA
Shewanella piezotolerans WP3
Position: -157
Score: 3.59866
Sequence: TATCAACAGAAATGCATA
Position: -136
Score: 4.41843
Sequence: TGTGAATAAATAGTGATT
Locus tag: swp_1378
Name: oadG
Funciton: Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3)
Locus tag: swp_1379
Name: oadA
Funciton: Oxaloacetate decarboxylase, alpha chain (EC 4.1.1.3)
Locus tag: swp_1380
Name: oadB
Funciton: Oxaloacetate decarboxylase, beta chain (EC 4.1.1.3)
oadG-oadA-oadB -157 3.6 TATCAACAGAAATGCATA swp_1378
-136 4.4 TGTGAATAAATAGTGATT
Shewanella putrefaciens CN-32
Position: -265
Score: 4.34109
Sequence: TATCCTTATAAATTCACT
Position: -154
Score: 4.30434
Sequence: TGTGAATATTTAGTCTTT
Position: -133
Score: 4.01528
Sequence: TGTGATTTTATATGCTGC
Locus tag: Sputcn32_1029
Name: oadG
Funciton: Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3)
Locus tag: Sputcn32_1030
Name: oadA
Funciton: Oxaloacetate decarboxylase, alpha chain (EC 4.1.1.3)
Locus tag: Sputcn32_1031
Name: oadB
Funciton: Oxaloacetate decarboxylase, beta chain (EC 4.1.1.3)
oadG-oadA-oadB -265 4.3 TATCCTTATAAATTCACT Sputcn32_1029
-154 4.3 TGTGAATATTTAGTCTTT
-133 4 TGTGATTTTATATGCTGC
Shewanella sediminis HAW-EB3
Position: -322
Score: 4.42799
Sequence: ACTGCATAACTTTTCATT
Locus tag: Ssed_1320
Name: oadG
Funciton: Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3)
Locus tag: Ssed_1321
Name: oadA
Funciton: Oxaloacetate decarboxylase, alpha chain (EC 4.1.1.3)
Locus tag: Ssed_1322
Name: oadB
Funciton: Oxaloacetate decarboxylase, beta chain (EC 4.1.1.3)
oadG-oadA-oadB -322 4.4 ACTGCATAACTTTTCATT Ssed_1320
Shewanella sp MR-7
Position: -322
Score: 3.88154
Sequence: ATTCAATTTAAAGGCCAT
Position: -176
Score: 3.7252
Sequence: AACGAATGTTCATTTAAT
Locus tag: Shewmr7_3069
Name: oadG
Funciton: Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3)
Locus tag: Shewmr7_3068
Name: oadA
Funciton: Oxaloacetate decarboxylase, alpha chain (EC 4.1.1.3)
Locus tag: Shewmr7_3067
Name: oadB
Funciton: Oxaloacetate decarboxylase, beta chain (EC 4.1.1.3)
oadG-oadA-oadB -322 3.9 ATTCAATTTAAAGGCCAT Shewmr7_3069
-176 3.7 AACGAATGTTCATTTAAT
Shewanella sp W3-18-1
Position: -265
Score: 4.34109
Sequence: TATCCTTATAAATTCACT
Position: -154
Score: 4.30434
Sequence: TGTGAATATTTAGTCTTT
Position: -133
Score: 4.01528
Sequence: TGTGATTTTATATGCTGC
Locus tag: Sputw3181_3136
Name: oadG
Funciton: Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3)
Locus tag: Sputw3181_3135
Name: oadA
Funciton: Oxaloacetate decarboxylase, alpha chain (EC 4.1.1.3)
Locus tag: Sputw3181_3134
Name: oadB
Funciton: Oxaloacetate decarboxylase, beta chain (EC 4.1.1.3)
oadG-oadA-oadB -265 4.3 TATCCTTATAAATTCACT Sputw3181_3136
-154 4.3 TGTGAATATTTAGTCTTT
-133 4 TGTGATTTTATATGCTGC
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