Orthologous regulated operons containing prpC gene
| Regulog: | PrpR - Alteromonadales |
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Methylcitrate utilization |
| Effector: | 2-methylcitrate |
| Phylum: | Proteobacteria/gamma |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Alteromonadales bacterium TW-7 | ||||
|
Position: -175
Score: 4.21828 Sequence: GCTGTCGACACT
Position: -113
Score: 5.27921 Sequence: AGTGTCGACAAT
Position: -26
Score: 5.82454 Sequence: ATTGTCGACAAT
Locus tag: ATW7_14131
Name: prpR Funciton: Propionate catabolism transcriptional regulator, GntR family
Locus tag: ATW7_14126
Name: prpB Funciton: Methylisocitrate lyase (EC 4.1.3.30)
Locus tag: ATW7_14121
Name: prpC Funciton: 2-methylcitrate synthase (EC 2.3.3.5)
Locus tag: ATW7_14116
Name: acnD Funciton: Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79)
Locus tag: ATW7_14111
Name: prpF Funciton: Aconitase accessory protein PrpF |
||||
| prpR-prpB-prpC-acnD-prpF | -175 | 4.2 | GCTGTCGACACT | ATW7_14131 |
| -113 | 5.3 | AGTGTCGACAAT | ||
| -26 | 5.8 | ATTGTCGACAAT | ||
| Colwellia psychrerythraea 34H | ||||
|
Position: -141
Score: 5.82454 Sequence: ATTGTCGACAAT
Position: -69
Score: 5.12525 Sequence: TTTGTCGACAAT
Locus tag: CPS_2823
Name: prpR Funciton: Propionate catabolism transcriptional regulator, GntR family
Locus tag: CPS_2822
Name: prpB Funciton: Methylisocitrate lyase (EC 4.1.3.30)
Locus tag: CPS_2821
Name: prpC Funciton: 2-methylcitrate synthase (EC 2.3.3.5) |
||||
| prpR-prpB-prpC | -141 | 5.8 | ATTGTCGACAAT | CPS_2823 |
| -69 | 5.1 | TTTGTCGACAAT | ||
| Glaciecola sp. HTCC2999 | ||||
|
Position: -91
Score: 5.36427 Sequence: GTTGTCGACAAT
Position: -39
Score: 5.82454 Sequence: ATTGTCGACAAT
Locus tag: GHTCC_010100001200
Name: prpR Funciton: Propionate catabolism transcriptional regulator, GntR family
Locus tag: GHTCC_010100001195
Name: prpB Funciton: Methylisocitrate lyase (EC 4.1.3.30)
Locus tag: GHTCC_010100001190
Name: prpC Funciton: 2-methylcitrate synthase (EC 2.3.3.5)
Locus tag: GHTCC_010100001185
Name: acnD Funciton: Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79)
Locus tag: GHTCC_010100001180
Name: prpF Funciton: Aconitase accessory protein PrpF |
||||
| prpR-prpB-prpC-acnD-prpF | -91 | 5.4 | GTTGTCGACAAT | GHTCC_010100001200 |
| -39 | 5.8 | ATTGTCGACAAT | ||
| Idiomarina baltica OS145 | ||||
|
Position: -90
Score: 5.82454 Sequence: ATTGTCGACAAT
Position: -17
Score: 4.57992 Sequence: TATGTCGACAAT
Locus tag: OS145_00715
Name: prpR Funciton: Propionate catabolism transcriptional regulator, GntR family
Locus tag: OS145_00710
Name: prpB Funciton: Methylisocitrate lyase (EC 4.1.3.30)
Locus tag: OS145_00705
Name: prpC Funciton: 2-methylcitrate synthase (EC 2.3.3.5)
Locus tag: OS145_00700
Name: acnD Funciton: Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79)
Locus tag: OS145_00695
Name: prpF Funciton: Aconitase accessory protein PrpF |
||||
| prpR-prpB-prpC-acnD-prpF | -90 | 5.8 | ATTGTCGACAAT | OS145_00715 |
| -17 | 4.6 | TATGTCGACAAT | ||
| Idiomarina loihiensis L2TR | ||||
|
Position: -86
Score: 5.82454 Sequence: ATTGTCGACAAT
Position: -14
Score: 5.12525 Sequence: ACTGTCGACAAT
Locus tag: IL1428
Name: prpR Funciton: Propionate catabolism transcriptional regulator, GntR family
Locus tag: IL1427
Name: prpB Funciton: Methylisocitrate lyase (EC 4.1.3.30)
Locus tag: IL1426
Name: prpC Funciton: 2-methylcitrate synthase (EC 2.3.3.5)
Locus tag: IL1425
Name: acnD Funciton: Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79)
Locus tag: IL1424
Name: prpF Funciton: Aconitase accessory protein PrpF |
||||
| prpR-prpB-prpC-acnD-prpF | -86 | 5.8 | ATTGTCGACAAT | IL1428 |
| -14 | 5.1 | ACTGTCGACAAT | ||
| Pseudoalteromonas atlantica T6c | ||||
|
Position: -168
Score: 5.82454 Sequence: ATTGTCGACAAT
Position: -116
Score: 5.43002 Sequence: ATTGTCGACAAC
Locus tag: Patl_1418
Name: prpR Funciton: Propionate catabolism transcriptional regulator, GntR family
Locus tag: Patl_1419
Name: prpB Funciton: Methylisocitrate lyase (EC 4.1.3.30)
Locus tag: Patl_1420
Name: prpC Funciton: 2-methylcitrate synthase (EC 2.3.3.5)
Locus tag: Patl_1421
Name: acnD Funciton: Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79)
Locus tag: Patl_1422
Name: prpF Funciton: Aconitase accessory protein PrpF |
||||
| prpR-prpB-prpC-acnD-prpF | -168 | 5.8 | ATTGTCGACAAT | Patl_1418 |
| -116 | 5.4 | ATTGTCGACAAC | ||
| Pseudoalteromonas haloplanktis TAC125 | ||||
|
Position: -175
Score: 4.37224 Sequence: GGTGTCGACACT
Position: -112
Score: 4.81894 Sequence: GATGTCGACAAT
Position: -25
Score: 5.82454 Sequence: ATTGTCGACAAT
Locus tag: PSHAa1776
Name: prpR Funciton: Propionate catabolism transcriptional regulator, GntR family
Locus tag: PSHAa1775
Name: prpB Funciton: Methylisocitrate lyase (EC 4.1.3.30)
Locus tag: PSHAa1774
Name: prpC Funciton: 2-methylcitrate synthase (EC 2.3.3.5)
Locus tag: PSHAa1773
Name: acnD Funciton: Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79)
Locus tag: PSHAa1772
Name: prpF Funciton: Aconitase accessory protein PrpF |
||||
| prpR-prpB-prpC-acnD-prpF | -175 | 4.4 | GGTGTCGACACT | PSHAa1776 |
| -112 | 4.8 | GATGTCGACAAT | ||
| -25 | 5.8 | ATTGTCGACAAT | ||
| Pseudoalteromonas tunicata D2 | ||||
|
Position: -150
Score: 4.14655 Sequence: ATTGTCAACATA
Position: -88
Score: 5.82454 Sequence: ATTGTCGACAAT
Position: -21
Score: 5.13192 Sequence: ATTGTCGACAAA
Locus tag: PTD2_20517
Name: prpR Funciton: Propionate catabolism transcriptional regulator, GntR family
Locus tag: PTD2_20512
Name: prpB Funciton: Methylisocitrate lyase (EC 4.1.3.30)
Locus tag: PTD2_20507
Name: prpC Funciton: 2-methylcitrate synthase (EC 2.3.3.5)
Locus tag: PTD2_20502
Name: acnD Funciton: Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79)
Locus tag: PTD2_20497
Name: prpF Funciton: Aconitase accessory protein PrpF |
||||
| prpR-prpB-prpC-acnD-prpF | -150 | 4.1 | ATTGTCAACATA | PTD2_20517 |
| -88 | 5.8 | ATTGTCGACAAT | ||
| -21 | 5.1 | ATTGTCGACAAA | ||