Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing prpC gene

Properties
Regulog: PrpR - Pseudomonadaceae
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Methylcitrate utilization
Effector: 2-methylcitrate
Phylum: Proteobacteria/gamma
Built upon 17 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Azotobacter vinelandii AvOP
Position: -85
Score: 5.82454
Sequence: ATTGTCGACAAT
Position: -12
Score: 5.82454
Sequence: ATTGTCGACAAT
Locus tag: Avin_23200
Name: prpR
Funciton: Propionate catabolism transcriptional regulator, GntR family
Locus tag: Avin_23210
Name: prpB
Funciton: Methylisocitrate lyase (EC 4.1.3.30)
Locus tag: Avin_23220
Name: prpC
Funciton: 2-methylcitrate synthase (EC 2.3.3.5)
Locus tag: Avin_23230
Name: acnD
Funciton: Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79)
Locus tag: Avin_23250
Name: prpF
Funciton: Aconitase accessory protein PrpF
prpR-prpB-prpC-acnD-prpF -85 5.8 ATTGTCGACAAT Avin_23200
-12 5.8 ATTGTCGACAAT
Pseudomonas aeruginosa PAO1
Position: -96
Score: 5.82454
Sequence: ATTGTCGACAAT
Position: -33
Score: 4.68522
Sequence: ATTGTCGACACA
Locus tag: PA0797
Name: prpR
Funciton: Propionate catabolism transcriptional regulator, GntR family
Locus tag: PA0796
Name: prpB
Funciton: Methylisocitrate lyase (EC 4.1.3.30)
Locus tag: PA0795
Name: prpC
Funciton: 2-methylcitrate synthase (EC 2.3.3.5)
Locus tag: PA0794
Name: acnD
Funciton: Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79)
Locus tag: PA0793
Name: prpF
Funciton: Aconitase accessory protein PrpF
Locus tag: PA0792
Name: prpD
Funciton: 2-methylcitrate dehydratase (EC 4.2.1.79)
prpR-prpB-prpC-acnD-prpF-prpD -96 5.8 ATTGTCGACAAT PA0797
-33 4.7 ATTGTCGACACA
Pseudomonas entomophila L48
Position: -86
Score: 5.82454
Sequence: ATTGTCGACAAT
Position: -13
Score: 4.81894
Sequence: GGTGTCGACAAT
Locus tag: PSEEN1901
Name: prpR
Funciton: Propionate catabolism transcriptional regulator, GntR family
Locus tag: PSEEN1902
Name: prpB
Funciton: Methylisocitrate lyase (EC 4.1.3.30)
Locus tag: PSEEN1903
Name: prpC
Funciton: 2-methylcitrate synthase (EC 2.3.3.5)
Locus tag: PSEEN1905
Name: acnD
Funciton: Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79)
Locus tag: PSEEN1906
Name: prpF
Funciton: Aconitase accessory protein PrpF
Locus tag: PSEEN1907
Name: prpD
Funciton: 2-methylcitrate dehydratase (EC 4.2.1.79)
prpR-prpB-prpC-acnD-prpF-prpD -86 5.8 ATTGTCGACAAT PSEEN1901
-13 4.8 GGTGTCGACAAT
Pseudomonas fluorescens Pf-5
Position: -85
Score: 5.82454
Sequence: ATTGTCGACAAT
Position: -12
Score: 4.81894
Sequence: GGTGTCGACAAT
Locus tag: PFL_1860
Name: prpR
Funciton: Propionate catabolism transcriptional regulator, GntR family
Locus tag: PFL_1861
Name: prpB
Funciton: Methylisocitrate lyase (EC 4.1.3.30)
Locus tag: PFL_1862
Name: prpC
Funciton: 2-methylcitrate synthase (EC 2.3.3.5)
prpR-prpB-prpC -85 5.8 ATTGTCGACAAT PFL_1860
-12 4.8 GGTGTCGACAAT
Pseudomonas mendocina ymp
Position: -87
Score: 5.82454
Sequence: ATTGTCGACAAT
Position: -13
Score: 4.81894
Sequence: GGTGTCGACAAT
Locus tag: Pmen_2079
Name: prpR
Funciton: Propionate catabolism transcriptional regulator, GntR family
Locus tag: Pmen_2080
Name: prpB
Funciton: Methylisocitrate lyase (EC 4.1.3.30)
Locus tag: Pmen_2081
Name: prpC
Funciton: 2-methylcitrate synthase (EC 2.3.3.5)
Locus tag: Pmen_2082
Name: acnD
Funciton: Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79)
Locus tag: Pmen_2083
Name: prpF
Funciton: Aconitase accessory protein PrpF
prpR-prpB-prpC-acnD-prpF -87 5.8 ATTGTCGACAAT Pmen_2079
-13 4.8 GGTGTCGACAAT
Pseudomonas putida KT2440
Position: -85
Score: 5.82454
Sequence: ATTGTCGACAAT
Position: -12
Score: 4.81894
Sequence: GGTGTCGACAAT
Locus tag: PP2333
Name: prpR
Funciton: Propionate catabolism transcriptional regulator, GntR family
Locus tag: PP2334
Name: prpB
Funciton: Methylisocitrate lyase (EC 4.1.3.30)
Locus tag: PP2335
Name: prpC
Funciton: 2-methylcitrate synthase (EC 2.3.3.5)
Locus tag: PP2336
Name: acnD
Funciton: Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79)
Locus tag: PP2337
Name: prpF
Funciton: Aconitase accessory protein PrpF
Locus tag: PP2338
Name: prpD
Funciton: 2-methylcitrate dehydratase (EC 4.2.1.79)
prpR-prpB-prpC-acnD-prpF-prpD -85 5.8 ATTGTCGACAAT PP2333
-12 4.8 GGTGTCGACAAT
Pseudomonas stutzeri A1501
Position: -88
Score: 4.81894
Sequence: GGTGTCGACAAT
Position: -13
Score: 5.82454
Sequence: ATTGTCGACAAT
Locus tag: PST_2033
Name: prpR
Funciton: Propionate catabolism transcriptional regulator, GntR family
Locus tag: PST_2034
Name: prpB
Funciton: Methylisocitrate lyase (EC 4.1.3.30)
Locus tag: PST_2035
Name: prpC
Funciton: 2-methylcitrate synthase (EC 2.3.3.5)
Locus tag: PST_2036
Name: acnD
Funciton: Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79)
Locus tag: PST_2037
Name: prpF
Funciton: Aconitase accessory protein PrpF
prpR-prpB-prpC-acnD-prpF -88 4.8 GGTGTCGACAAT PST_2033
-13 5.8 ATTGTCGACAAT
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