Orthologous regulated operons containing uxuQ gene
| Regulog: | UxuR - Vibrionales |
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Glucuronate utilization |
| Effector: | Glucuronate |
| Phylum: | Proteobacteria/gamma |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Photobacterium profundum SS9 | ||||
|
Position: -201
Score: 5.05461 Sequence: CAATTGGTTGACCTATAT
Position: -167
Score: 5.58338 Sequence: ATATTGGTCAACCAATTC
Position: -54
Score: 5.21432 Sequence: ACATTGGTTAACCAAACG
Locus tag: PBPRB1878
Name: uxuQ Funciton: predicted TRAP-type glucuronate transporter, small membrane subunit
Locus tag: PBPRB1879
Name: uxuM Funciton: predicted TRAP-type glucuronate transporter, large membrane subunit
Locus tag: PBPRB1880
Name: uxuB Funciton: D-mannonate oxidoreductase (EC 1.1.1.57) |
||||
| uxuQ-uxuM-uxuB | -201 | 5.1 | CAATTGGTTGACCTATAT | PBPRB1878 |
| -167 | 5.6 | ATATTGGTCAACCAATTC | ||
| -54 | 5.2 | ACATTGGTTAACCAAACG | ||
| Vibrio parahaemolyticus RIMD 2210633 | ||||
|
Position: -197
Score: 5.28074 Sequence: AAATTGATTGACCAAAAT
Position: -163
Score: 6.02139 Sequence: AAATTGGTTAACCAATTC
Position: -48
Score: 5.63879 Sequence: ACATTGGTAAACCAATTG
Locus tag: VPA1703
Name: uxuQ Funciton: predicted TRAP-type glucuronate transporter, small membrane subunit
Locus tag: VPA1704
Name: uxuM Funciton: predicted TRAP-type glucuronate transporter, large membrane subunit
Locus tag: VPA1705
Name: uxuB Funciton: D-mannonate oxidoreductase (EC 1.1.1.57)
Locus tag: VPA1706
Name: uxaC Funciton: Uronate isomerase (EC 5.3.1.12)
Locus tag: VPA1707
Name: kdgK Funciton: 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)
Locus tag: VPA1708
Name: eda Funciton: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
Locus tag: VPA1709
Name: ygjV Funciton: Conserved hypothetical protein |
||||
| uxuQ-uxuM-uxuB-uxaC-kdgK-eda-ygjV | -197 | 5.3 | AAATTGATTGACCAAAAT | VPA1703 |
| -163 | 6 | AAATTGGTTAACCAATTC | ||
| -48 | 5.6 | ACATTGGTAAACCAATTG | ||
| Vibrio shilonii AK1 | ||||
|
Position: -168
Score: 5.26327 Sequence: GAATTGGTTGACCAATGT
Locus tag: VSAK1_20679
Name: uxuQ Funciton: predicted TRAP-type glucuronate transporter, small membrane subunit
Locus tag: VSAK1_20674
Name: uxuM Funciton: predicted TRAP-type glucuronate transporter, large membrane subunit
Locus tag: VSAK1_20669
Name: null Funciton: hypothetical protein
Locus tag: VSAK1_20664
Name: uxuB Funciton: D-mannonate oxidoreductase (EC 1.1.1.57)
Locus tag: VSAK1_20659
Name: uxaC Funciton: Uronate isomerase (EC 5.3.1.12)
Locus tag: VSAK1_20654
Name: kdgK Funciton: 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)
Locus tag: VSAK1_20649
Name: eda Funciton: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
Locus tag: VSAK1_20644
Name: null Funciton: hypothetical protein
Locus tag: VSAK1_20639
Name: ygjV Funciton: Conserved hypothetical protein |
||||
| uxuQ-uxuM-VSAK1_20669-uxuB-uxaC-kdgK-eda-VSAK1_20644-ygjV | -168 | 5.3 | GAATTGGTTGACCAATGT | VSAK1_20679 |
| Vibrio vulnificus CMCP6 | ||||
|
Position: -203
Score: 5.28074 Sequence: AAATTGATTGACCAAAAT
Position: -169
Score: 5.91725 Sequence: AAATTGGTTAACCAATCT
Position: -54
Score: 5.63879 Sequence: ACATTGGTAAACCAATTG
Locus tag: VV21067
Name: uxuQ Funciton: predicted TRAP-type glucuronate transporter, small membrane subunit
Locus tag: VV21068
Name: uxuM Funciton: predicted TRAP-type glucuronate transporter, large membrane subunit
Locus tag: VV21069
Name: uxuB Funciton: D-mannonate oxidoreductase (EC 1.1.1.57)
Locus tag: VV21070
Name: uxaC Funciton: Uronate isomerase (EC 5.3.1.12)
Locus tag: VV21071
Name: kdgK Funciton: 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)
Locus tag: VV21072
Name: eda Funciton: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
Locus tag: VV21073
Name: ygjV Funciton: Conserved hypothetical protein |
||||
| uxuQ-uxuM-uxuB-uxaC-kdgK-eda-ygjV | -203 | 5.3 | AAATTGATTGACCAAAAT | VV21067 |
| -169 | 5.9 | AAATTGGTTAACCAATCT | ||
| -54 | 5.6 | ACATTGGTAAACCAATTG | ||