Orthologous regulated operons containing spiX gene

Properties
Regulog:	KdgR - Vibrionales
Regulator type:	Transcription factor
Regulator family:	IclR
Regulation mode:	repressor (activator)
Biological process:	Pectin and polygalacturonate utlization
Effector:	2-keto-3-deoxygluconate
Phylum:	Proteobacteria/gamma

Built upon 40 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Photobacterium profundum SS9
Position: -194 Score: 5.56589 Sequence: TTTTAAAAAGCCTTTTCAAAA Position: -121 Score: 5.79029 Sequence: TTTTAAAACGTTATTTCAAAA Locus tag: PBPRB1737 Name: kduD Funciton: 2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125) Locus tag: PBPRB1736 Name: ygjV Funciton: Permease of the major facilitator superfamily Locus tag: PBPRB1735 Name: kdgF Funciton: Putative pectin degradation protein Locus tag: PBPRB1734 Name: spiX Funciton: predicted 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17)
kduD-ygjV-kdgF-spiX	-194	5.6	TTTTAAAAAGCCTTTTCAAAA	PBPRB1737
	-121	5.8	TTTTAAAACGTTATTTCAAAA
Vibrio parahaemolyticus RIMD 2210633
Position: -194 Score: 5.62217 Sequence: TTTTAAAATGCCTTTTCAAAA Position: -121 Score: 5.82453 Sequence: TTTTAAAACGCCTTTTCAAAA Locus tag: VPA0077 Name: kduD Funciton: 2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125) Locus tag: VPA0078 Name: ygjV Funciton: Permease of the major facilitator superfamily Locus tag: VPA0079 Name: kdgF Funciton: Putative pectin degradation protein Locus tag: VPA0080 Name: spiX Funciton: predicted 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17)
kduD-ygjV-kdgF-spiX	-194	5.6	TTTTAAAATGCCTTTTCAAAA	VPA0077
	-121	5.8	TTTTAAAACGCCTTTTCAAAA
Vibrio shilonii AK1
Position: -195 Score: 4.77501 Sequence: TTTCAAAAAGGCTTTTCATAA Position: -119 Score: 5.61664 Sequence: AAATGAAACGGCATTTCAAAA Locus tag: VSAK1_20309 Name: kduD Funciton: 2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125) Locus tag: VSAK1_20314 Name: ygjV Funciton: Permease of the major facilitator superfamily Locus tag: VSAK1_20319 Name: spiX Funciton: predicted 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17)
kduD-ygjV-spiX	-195	4.8	TTTCAAAAAGGCTTTTCATAA	VSAK1_20309
	-119	5.6	AAATGAAACGGCATTTCAAAA
Vibrio vulnificus CMCP6
Position: -189 Score: 5.23125 Sequence: TTTTAAAATACCTTTTCATAA Position: -115 Score: 6.0113 Sequence: TTTTGAAACGTCTTTTCAAAA Locus tag: VV20914 Name: kduD Funciton: 2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125) Locus tag: VV20913 Name: ygjV Funciton: Permease of the major facilitator superfamily Locus tag: VV20912 Name: kdgF Funciton: Putative pectin degradation protein Locus tag: VV20911 Name: spiX Funciton: predicted 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17)
kduD-ygjV-kdgF-spiX	-189	5.2	TTTTAAAATACCTTTTCATAA	VV20914
	-115	6	TTTTGAAACGTCTTTTCAAAA