Orthologous regulated operons containing liuB gene
| Regulog: | LiuQ - Ralstonia |
| Regulator type: | Transcription factor |
| Regulator family: | TetR |
| Regulation mode: | repressor |
| Biological process: | Branched-chain amino acid degradation |
| Effector: | |
| Phylum: | Proteobacteria/beta |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Cupriavidus taiwanensis | ||||
|
Position: -215
Score: 4.6206 Sequence: TTGAGTCAACCTCAA
Position: -50
Score: 4.79966 Sequence: TTGAGTTGTGCTCAA
Locus tag: RALTA_A1548
Name: null Funciton: AMP-dependent synthetase and ligase
Locus tag: RALTA_A1549
Name: null Funciton: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
Locus tag: RALTA_A1550
Name: null Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4) |
||||
| RALTA_A1548-RALTA_A1549-RALTA_A1550 | -215 | 4.6 | TTGAGTCAACCTCAA | RALTA_A1548 |
| -50 | 4.8 | TTGAGTTGTGCTCAA | ||
| Ralstonia eutropha H16 | ||||
|
Position: -234
Score: 5.34882 Sequence: TTGAGCTTTACTCAA
Position: -59
Score: 5.022 Sequence: TTGAGTAACACTCAC
Locus tag: H16_A1971
Name: h16_A1971 Funciton: AMP-dependent synthetase and ligase
Locus tag: H16_A1972
Name: ivd2 Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10)
Locus tag: H16_A1973
Name: h16_A1973 Funciton: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
Locus tag: H16_A1974
Name: h16_A1974 Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4) |
||||
| h16_A1971-ivd2-h16_A1973-h16_A1974 | -234 | 5.3 | TTGAGCTTTACTCAA | H16_A1971 |
| -59 | 5 | TTGAGTAACACTCAC | ||
| Ralstonia eutropha JMP134 | ||||
|
Position: -167
Score: 4.99667 Sequence: TTGACCAACACTCAA
Position: -59
Score: 5.27274 Sequence: TTGAGCTACGCTCAA
Locus tag: Reut_A1467
Name: null Funciton: AMP-dependent synthetase and ligase
Locus tag: Reut_A1466
Name: null Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10)
Locus tag: Reut_A1465
Name: null Funciton: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
Locus tag: Reut_A1464
Name: null Funciton: Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
Locus tag: Reut_A1463
Name: null Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
Locus tag: Reut_A1462
Name: null Funciton: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) |
||||
| Reut_A1467-Reut_A1466-Reut_A1465-Reut_A1464-Reut_A1463-Reut_A1462 | -167 | 5 | TTGACCAACACTCAA | Reut_A1467 |
| -59 | 5.3 | TTGAGCTACGCTCAA | ||
| Ralstonia metallidurans CH34 | ||||
|
Position: -149
Score: 5.11817 Sequence: TTGAATGTTACTCAA
Position: -48
Score: 5.58543 Sequence: TTGAGTATTACTCAA
Locus tag: Rmet_0610
Name: null Funciton: AMP-dependent synthetase and ligase
Locus tag: Rmet_0609
Name: null Funciton: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
Locus tag: Rmet_0608
Name: null Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4) |
||||
| Rmet_0610-Rmet_0609-Rmet_0608 | -149 | 5.1 | TTGAATGTTACTCAA | Rmet_0610 |
| -48 | 5.6 | TTGAGTATTACTCAA | ||