Orthologous regulated operons containing nirE gene
| Regulog: | Dnr - Ralstonia |
| Regulator type: | Transcription factor |
| Regulator family: | CRP |
| Regulation mode: | activator |
| Biological process: | Denitrification |
| Effector: | Nitric oxide |
| Phylum: | Proteobacteria/beta |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Cupriavidus taiwanensis | ||||
|
Position: -123
Score: 4.53297 Sequence: GTTTGATGACAGTCAATC
Locus tag: RALTA_B2049
Name: nirS Funciton: Nitrite reductase NirS (Cytochrome cd1)
Locus tag: RALTA_B2050
Name: nirC Funciton: cytochrome c, nitrite reductase associated (NirC)
Locus tag: RALTA_B2051
Name: nirF Funciton: heme d1 biosynthesis protein (NirF)
Locus tag: RALTA_B2052
Name: nirD Funciton: heme d1 biosynthesis protein (NirD)
Locus tag: RALTA_B2053
Name: nirG Funciton: heme d1 biosynthesis protein (NirG)
Locus tag: RALTA_B2054
Name: nirH Funciton: heme d1 biosynthesis protein (NirH)
Locus tag: RALTA_B2055
Name: nirJ Funciton: heme d1 biosynthesis protein (NirJ)
Locus tag: RALTA_B2056
Name: nirN Funciton: C-type cytochrome (NirN)
Locus tag: RALTA_B2057
Name: nirE Funciton: Uroporphyrin-III C-methyltransferase |
||||
| nirS-nirC-nirF-nirD-nirG-nirH-nirJ-nirN-nirE | -123 | 4.5 | GTTTGATGACAGTCAATC | RALTA_B2049 |
| Ralstonia eutropha H16 | ||||
|
Position: -123
Score: 4.61314 Sequence: GTTTGATGCCAGTCAATT
Locus tag: H16_B2277
Name: nirS Funciton: Nitrite reductase NirS (Cytochrome cd1)
Locus tag: H16_B2278
Name: nirC Funciton: cytochrome c, nitrite reductase associated (NirC)
Locus tag: H16_B2279
Name: nirF Funciton: heme d1 biosynthesis protein (NirF)
Locus tag: H16_B2280
Name: nirD Funciton: heme d1 biosynthesis protein (NirD)
Locus tag: H16_B2281
Name: nirG Funciton: heme d1 biosynthesis protein (NirG)
Locus tag: H16_B2282
Name: nirH Funciton: heme d1 biosynthesis protein (NirH)
Locus tag: H16_B2283
Name: nirJ Funciton: heme d1 biosynthesis protein (NirJ)
Locus tag: H16_B2284
Name: nirN Funciton: C-type cytochrome (NirN)
Locus tag: H16_B2285
Name: nirE Funciton: Uroporphyrin-III C-methyltransferase |
||||
| nirS-nirC-nirF-nirD-nirG-nirH-nirJ-nirN-nirE | -123 | 4.6 | GTTTGATGCCAGTCAATT | H16_B2277 |
| Ralstonia eutropha JMP134 | ||||
|
Position: -91
Score: 5.17073 Sequence: CGTTGACAACAGTCAACC
Locus tag: Reut_B5010
Name: null Funciton: Nitrite reductase NirS (Cytochrome cd1)
Locus tag: Reut_B5011
Name: null Funciton: cytochrome c, class I
Locus tag: Reut_B5012
Name: null Funciton: cytochrome c, nitrite reductase associated (NirC)
Locus tag: Reut_B5013
Name: null Funciton: heme d1 biosynthesis protein (NirF)
Locus tag: Reut_B5014
Name: null Funciton: heme d1 biosynthesis protein (NirD)
Locus tag: Reut_B5015
Name: null Funciton: heme d1 biosynthesis protein (NirG)
Locus tag: Reut_B5016
Name: null Funciton: heme d1 biosynthesis protein (NirH)
Locus tag: Reut_B5017
Name: null Funciton: heme d1 biosynthesis protein (NirJ)
Locus tag: Reut_B5018
Name: null Funciton: C-type cytochrome (NirN)
Locus tag: Reut_B5019
Name: null Funciton: Uroporphyrin-III C-methyltransferase |
||||
| Reut_B5010-Reut_B5011-Reut_B5012-Reut_B5013-Reut_B5014-Reut_B5015-Reut_B5016-Reut_B5017-Reut_B5018-Reut_B5019 | -91 | 5.2 | CGTTGACAACAGTCAACC | Reut_B5010 |
| Ralstonia metallidurans CH34 | ||||
|
Position: -118
Score: 5.58802 Sequence: CGTTGACTCGTGTCAATC
Locus tag: Rmet_3172
Name: null Funciton: Nitrite reductase NirS (Cytochrome cd1)
Locus tag: Rmet_3171
Name: null Funciton: cytochrome c, class I
Locus tag: Rmet_3170
Name: null Funciton: heme d1 biosynthesis protein (NirJ)
Locus tag: Rmet_3169
Name: null Funciton: C-type cytochrome (NirN)
Locus tag: Rmet_3168
Name: null Funciton: Uroporphyrin-III C-methyltransferase |
||||
| Rmet_3172-Rmet_3171-Rmet_3170-Rmet_3169-Rmet_3168 | -118 | 5.6 | CGTTGACTCGTGTCAATC | Rmet_3172 |