Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing hscA gene

Properties
Regulog: IscR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: Rrf2
Regulation mode: repressor
Biological process: Iron-sulfur cluster biogenesis
Effector: Iron-sulfur cluster redox state
Phylum: Proteobacteria/gamma
Built upon 93 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -91
Score: 5.55689
Sequence: ATACTTGAGTAAATTAGTTGGTTTT
Position: -66
Score: 6.46941
Sequence: ATAGTTGACTAAATTACTCAGGTAT
Locus tag: Sama_1292
Name: iscR
Funciton: Iron-sulfur cluster regulator IscR
Locus tag: Sama_1293
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: Sama_1294
Name: iscU
Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: Sama_1295
Name: iscA
Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: Sama_1296
Name: hscB
Funciton: Chaperone protein HscB
Locus tag: Sama_1297
Name: hscA
Funciton: Chaperone protein HscA
Locus tag: Sama_1298
Name: fdx
Funciton: ferredoxin, 2Fe-2S type, ISC system
iscR-iscS-iscU-iscA-hscB-hscA-fdx -91 5.6 ATACTTGAGTAAATTAGTTGGTTTT Sama_1292
-66 6.5 ATAGTTGACTAAATTACTCAGGTAT
Shewanella baltica OS155
Position: -90
Score: 5.41491
Sequence: ATACTTGAGTGTTTTAGTAGGTTTT
Position: -64
Score: 6.36439
Sequence: ATACTTGACTGATTTACTCGGGTAT
Locus tag: Sbal_2398
Name: iscR
Funciton: Iron-sulfur cluster regulator IscR
Locus tag: Sbal_2397
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: Sbal_2396
Name: iscU
Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: Sbal_2395
Name: iscA
Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: Sbal_2394
Name: hscB
Funciton: Chaperone protein HscB
Locus tag: Sbal_2393
Name: hscA
Funciton: Chaperone protein HscA
Locus tag: Sbal_2392
Name: fdx
Funciton: ferredoxin, 2Fe-2S type, ISC system
iscR-iscS-iscU-iscA-hscB-hscA-fdx -90 5.4 ATACTTGAGTGTTTTAGTAGGTTTT Sbal_2398
-64 6.4 ATACTTGACTGATTTACTCGGGTAT
Shewanella denitrificans OS217
Position: -88
Score: 5.14002
Sequence: ATACTTGAGTAAAACACTAGGTTTA
Position: -63
Score: 6.44897
Sequence: ATACTTGACTAAATTACTCGGGTAT
Locus tag: Sden_1457
Name: iscR
Funciton: Iron-sulfur cluster regulator IscR
Locus tag: Sden_1458
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: Sden_1459
Name: iscU
Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: Sden_1460
Name: iscA
Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: Sden_1461
Name: hscB
Funciton: Chaperone protein HscB
Locus tag: Sden_1462
Name: hscA
Funciton: Chaperone protein HscA
Locus tag: Sden_1463
Name: fdx
Funciton: ferredoxin, 2Fe-2S type, ISC system
iscR-iscS-iscU-iscA-hscB-hscA-fdx -88 5.1 ATACTTGAGTAAAACACTAGGTTTA Sden_1457
-63 6.4 ATACTTGACTAAATTACTCGGGTAT
Shewanella frigidimarina NCIMB 400
Position: -89
Score: 4.51876
Sequence: ATACCCGAGTGTTTTGGTAGGATTA
Position: -64
Score: 6.16346
Sequence: ATACTTGACTAAATTACTAGGGTAT
Locus tag: Sfri_2425
Name: iscR
Funciton: Iron-sulfur cluster regulator IscR
Locus tag: Sfri_2424
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: Sfri_2423
Name: iscU
Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: Sfri_2422
Name: iscA
Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: Sfri_2421
Name: hscB
Funciton: Chaperone protein HscB
Locus tag: Sfri_2420
Name: hscA
Funciton: Chaperone protein HscA
Locus tag: Sfri_2419
Name: fdx
Funciton: ferredoxin, 2Fe-2S type, ISC system
iscR-iscS-iscU-iscA-hscB-hscA-fdx -89 4.5 ATACCCGAGTGTTTTGGTAGGATTA Sfri_2425
-64 6.2 ATACTTGACTAAATTACTAGGGTAT
Shewanella halifaxensis HAW-EB4
Position: -90
Score: 4.50889
Sequence: ATACCTGACCAAATAGCTAGGCTTA
Position: -65
Score: 5.95108
Sequence: ATACTTGACTGAAACGGTCGGGTAT
Locus tag: Shal_1571
Name: iscR
Funciton: Iron-sulfur cluster regulator IscR
Locus tag: Shal_1572
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: Shal_1573
Name: iscU
Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: Shal_1574
Name: iscA
Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: Shal_1575
Name: hscB
Funciton: Chaperone protein HscB
Locus tag: Shal_1576
Name: hscA
Funciton: Chaperone protein HscA
Locus tag: Shal_1577
Name: fdx
Funciton: ferredoxin, 2Fe-2S type, ISC system
iscR-iscS-iscU-iscA-hscB-hscA-fdx -90 4.5 ATACCTGACCAAATAGCTAGGCTTA Shal_1571
-65 6 ATACTTGACTGAAACGGTCGGGTAT
Shewanella loihica PV-4
Position: -90
Score: 5.05782
Sequence: ATACCTGACTAATCTGCTAGGTTTT
Position: -65
Score: 6.38991
Sequence: ATACTTGACTAAAACAGTCAAGTAT
Locus tag: Shew_2318
Name: iscR
Funciton: Iron-sulfur cluster regulator IscR
Locus tag: Shew_2317
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: Shew_2316
Name: iscU
Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: Shew_2315
Name: iscA
Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: Shew_2314
Name: hscB
Funciton: Chaperone protein HscB
Locus tag: Shew_2313
Name: hscA
Funciton: Chaperone protein HscA
Locus tag: Shew_2312
Name: fdx
Funciton: ferredoxin, 2Fe-2S type, ISC system
iscR-iscS-iscU-iscA-hscB-hscA-fdx -90 5.1 ATACCTGACTAATCTGCTAGGTTTT Shew_2318
-65 6.4 ATACTTGACTAAAACAGTCAAGTAT
Shewanella oneidensis MR-1
Position: -90
Score: 5.48351
Sequence: ATACTTGAGTGATTTACTAGGTTTT
Position: -65
Score: 6.36439
Sequence: ATACTTGACTGATTTACTCGGGTAT
Locus tag: SO_2263
Name: iscR
Funciton: Iron-sulfur cluster regulator IscR
Locus tag: SO_2264
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: SO_2265
Name: iscU
Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: SO_2266
Name: iscA
Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: SO_2267
Name: hscB
Funciton: Chaperone protein HscB
Locus tag: SO_2268
Name: hscA
Funciton: Chaperone protein HscA
iscR-iscS-iscU-iscA-hscB-hscA -90 5.5 ATACTTGAGTGATTTACTAGGTTTT SO_2263
-65 6.4 ATACTTGACTGATTTACTCGGGTAT
Shewanella pealeana ATCC 700345
Position: -90
Score: 5.03724
Sequence: ATACTTGACCGAATTGCTAGGCTTT
Position: -65
Score: 6.38037
Sequence: ATACTTGACTAAAATAGTCGGGTAT
Locus tag: Spea_1487
Name: iscR
Funciton: Iron-sulfur cluster regulator IscR
Locus tag: Spea_1488
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: Spea_1489
Name: iscU
Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: Spea_1490
Name: iscA
Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: Spea_1491
Name: hscB
Funciton: Chaperone protein HscB
Locus tag: Spea_1492
Name: hscA
Funciton: Chaperone protein HscA
Locus tag: Spea_1493
Name: fdx
Funciton: ferredoxin, 2Fe-2S type, ISC system
iscR-iscS-iscU-iscA-hscB-hscA-fdx -90 5 ATACTTGACCGAATTGCTAGGCTTT Spea_1487
-65 6.4 ATACTTGACTAAAATAGTCGGGTAT
Shewanella piezotolerans WP3
Position: -90
Score: 5.1819
Sequence: ATACTTGACCAAACCACTAGGTTAA
Position: -65
Score: 6.53656
Sequence: ATACTTGACTAAATTACTCAGGTAT
Locus tag: swp_1693
Name: iscR
Funciton: Iron-sulfur cluster regulator IscR
Locus tag: swp_1694
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: swp_1695
Name: iscU
Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: swp_1697
Name: iscA
Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: swp_1698
Name: hscB
Funciton: Chaperone protein HscB
Locus tag: swp_1699
Name: hscA
Funciton: Chaperone protein HscA
Locus tag: swp_1700
Name: fdx
Funciton: ferredoxin, 2Fe-2S type, ISC system
iscR-iscS-iscU-iscA-hscB-hscA-fdx -90 5.2 ATACTTGACCAAACCACTAGGTTAA swp_1693
-65 6.5 ATACTTGACTAAATTACTCAGGTAT
Shewanella putrefaciens CN-32
Position: -91
Score: 4.30123
Sequence: TTACCTGAGTGTTTTAGTAGGACTT
Position: -66
Score: 6.44897
Sequence: ATACTTGACTAATTTACTCGGGTAT
Locus tag: Sputcn32_2150
Name: iscR
Funciton: Iron-sulfur cluster regulator IscR
Locus tag: Sputcn32_2149
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: Sputcn32_2148
Name: iscU
Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: Sputcn32_2147
Name: iscA
Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: Sputcn32_2146
Name: hscB
Funciton: Chaperone protein HscB
Locus tag: Sputcn32_2145
Name: hscA
Funciton: Chaperone protein HscA
Locus tag: Sputcn32_2144
Name: fdx
Funciton: ferredoxin, 2Fe-2S type, ISC system
iscR-iscS-iscU-iscA-hscB-hscA-fdx -91 4.3 TTACCTGAGTGTTTTAGTAGGACTT Sputcn32_2150
-66 6.4 ATACTTGACTAATTTACTCGGGTAT
Shewanella sediminis HAW-EB3
Position: -161
Score: 4.46036
Sequence: ATACCCCACCAAAGTGGCAGGGTAT
Position: -63
Score: 6.38037
Sequence: ATACTTGACTAAAATAGTCGGGTAT
Locus tag: Ssed_2872
Name: iscR
Funciton: Iron-sulfur cluster regulator IscR
Locus tag: Ssed_2871
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: Ssed_2870
Name: iscU
Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: Ssed_2869
Name: iscA
Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: Ssed_2868
Name: hscB
Funciton: Chaperone protein HscB
Locus tag: Ssed_2867
Name: hscA
Funciton: Chaperone protein HscA
Locus tag: Ssed_2866
Name: fdx
Funciton: ferredoxin, 2Fe-2S type, ISC system
iscR-iscS-iscU-iscA-hscB-hscA-fdx -161 4.5 ATACCCCACCAAAGTGGCAGGGTAT Ssed_2872
-63 6.4 ATACTTGACTAAAATAGTCGGGTAT
Shewanella sp ANA-3
Position: -90
Score: 5.38559
Sequence: ATACCTGAGTGTTTTACTAGGTTTT
Position: -65
Score: 6.273
Sequence: ATACTTGACTGAAATACTCGGGTAT
Locus tag: Shewana3_2281
Name: iscR
Funciton: Iron-sulfur cluster regulator IscR
Locus tag: Shewana3_2280
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: Shewana3_2279
Name: iscU
Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: Shewana3_2278
Name: iscA
Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: Shewana3_2277
Name: hscB
Funciton: Chaperone protein HscB
Locus tag: Shewana3_2276
Name: hscA
Funciton: Chaperone protein HscA
Locus tag: Shewana3_2275
Name: fdx
Funciton: ferredoxin, 2Fe-2S type, ISC system
iscR-iscS-iscU-iscA-hscB-hscA-fdx -90 5.4 ATACCTGAGTGTTTTACTAGGTTTT Shewana3_2281
-65 6.3 ATACTTGACTGAAATACTCGGGTAT
Shewanella sp MR-4
Position: -90
Score: 5.59506
Sequence: ATACTTGAGTATTTTACTAGGGTTT
Position: -65
Score: 6.36439
Sequence: ATACTTGACTGAATTACTCGGGTAT
Locus tag: Shewmr4_1738
Name: iscR
Funciton: Iron-sulfur cluster regulator IscR
Locus tag: Shewmr4_1739
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: Shewmr4_1740
Name: iscU
Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: Shewmr4_1741
Name: iscA
Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: Shewmr4_1742
Name: hscB
Funciton: Chaperone protein HscB
Locus tag: Shewmr4_1743
Name: hscA
Funciton: Chaperone protein HscA
Locus tag: Shewmr4_1744
Name: fdx
Funciton: ferredoxin, 2Fe-2S type, ISC system
iscR-iscS-iscU-iscA-hscB-hscA-fdx -90 5.6 ATACTTGAGTATTTTACTAGGGTTT Shewmr4_1738
-65 6.4 ATACTTGACTGAATTACTCGGGTAT
Shewanella sp MR-7
Position: -90
Score: 5.39212
Sequence: ATACTTGAGTGTTTTACTAGGTTTT
Position: -65
Score: 6.36059
Sequence: ATACTTGACTGAAATACTCAGGTAT
Locus tag: Shewmr7_1818
Name: iscR
Funciton: Iron-sulfur cluster regulator IscR
Locus tag: Shewmr7_1819
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: Shewmr7_1820
Name: iscU
Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: Shewmr7_1821
Name: iscA
Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: Shewmr7_1822
Name: hscB
Funciton: Chaperone protein HscB
Locus tag: Shewmr7_1823
Name: hscA
Funciton: Chaperone protein HscA
Locus tag: Shewmr7_1824
Name: fdx
Funciton: ferredoxin, 2Fe-2S type, ISC system
iscR-iscS-iscU-iscA-hscB-hscA-fdx -90 5.4 ATACTTGAGTGTTTTACTAGGTTTT Shewmr7_1818
-65 6.4 ATACTTGACTGAAATACTCAGGTAT
Shewanella sp W3-18-1
Position: -91
Score: 4.30123
Sequence: TTACCTGAGTGTTTTAGTAGGACTT
Position: -66
Score: 6.44897
Sequence: ATACTTGACTAATTTACTCGGGTAT
Locus tag: Sputw3181_1861
Name: iscR
Funciton: Iron-sulfur cluster regulator IscR
Locus tag: Sputw3181_1862
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: Sputw3181_1863
Name: iscU
Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: Sputw3181_1864
Name: iscA
Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: Sputw3181_1865
Name: hscB
Funciton: Chaperone protein HscB
Locus tag: Sputw3181_1866
Name: hscA
Funciton: Chaperone protein HscA
Locus tag: Sputw3181_1867
Name: fdx
Funciton: ferredoxin, 2Fe-2S type, ISC system
iscR-iscS-iscU-iscA-hscB-hscA-fdx -91 4.3 TTACCTGAGTGTTTTAGTAGGACTT Sputw3181_1861
-66 6.4 ATACTTGACTAATTTACTCGGGTAT
Shewanella woodyi ATCC 51908
Position: -215
Score: 4.10821
Sequence: TTTCGTGAGTATTATGGTAAAGATT
Position: -90
Score: 5.07237
Sequence: ATACTTGACTAAACTACTAGGTTTA
Position: -65
Score: 6.36059
Sequence: ATACTTGACTAAAACACTCAGGTAT
Locus tag: Swoo_1775
Name: iscR
Funciton: Iron-sulfur cluster regulator IscR
Locus tag: Swoo_1776
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: Swoo_1777
Name: iscU
Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: Swoo_1778
Name: iscA
Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: Swoo_1779
Name: hscB
Funciton: Chaperone protein HscB
Locus tag: Swoo_1780
Name: hscA
Funciton: Chaperone protein HscA
Locus tag: Swoo_1781
Name: fdx
Funciton: ferredoxin, 2Fe-2S type, ISC system
iscR-iscS-iscU-iscA-hscB-hscA-fdx -215 4.1 TTTCGTGAGTATTATGGTAAAGATT Swoo_1775
-90 5.1 ATACTTGACTAAACTACTAGGTTTA
-65 6.4 ATACTTGACTAAAACACTCAGGTAT
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