Orthologous regulated operons containing iscR gene
| Regulog: | IscR - Shewanellaceae |
| Regulator type: | Transcription factor |
| Regulator family: | Rrf2 |
| Regulation mode: | repressor |
| Biological process: | Iron-sulfur cluster biogenesis |
| Effector: | Iron-sulfur cluster redox state |
| Phylum: | Proteobacteria/gamma |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Shewanella amazonensis SB2B | ||||
|
Position: -91
Score: 5.55689 Sequence: ATACTTGAGTAAATTAGTTGGTTTT
Position: -66
Score: 6.46941 Sequence: ATAGTTGACTAAATTACTCAGGTAT
Locus tag: Sama_1292
Name: iscR Funciton: Iron-sulfur cluster regulator IscR
Locus tag: Sama_1293
Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: Sama_1294
Name: iscU Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: Sama_1295
Name: iscA Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: Sama_1296
Name: hscB Funciton: Chaperone protein HscB
Locus tag: Sama_1297
Name: hscA Funciton: Chaperone protein HscA
Locus tag: Sama_1298
Name: fdx Funciton: ferredoxin, 2Fe-2S type, ISC system |
||||
| iscR-iscS-iscU-iscA-hscB-hscA-fdx | -91 | 5.6 | ATACTTGAGTAAATTAGTTGGTTTT | Sama_1292 |
| -66 | 6.5 | ATAGTTGACTAAATTACTCAGGTAT | ||
| Shewanella baltica OS155 | ||||
|
Position: -90
Score: 5.41491 Sequence: ATACTTGAGTGTTTTAGTAGGTTTT
Position: -64
Score: 6.36439 Sequence: ATACTTGACTGATTTACTCGGGTAT
Locus tag: Sbal_2398
Name: iscR Funciton: Iron-sulfur cluster regulator IscR
Locus tag: Sbal_2397
Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: Sbal_2396
Name: iscU Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: Sbal_2395
Name: iscA Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: Sbal_2394
Name: hscB Funciton: Chaperone protein HscB
Locus tag: Sbal_2393
Name: hscA Funciton: Chaperone protein HscA
Locus tag: Sbal_2392
Name: fdx Funciton: ferredoxin, 2Fe-2S type, ISC system |
||||
| iscR-iscS-iscU-iscA-hscB-hscA-fdx | -90 | 5.4 | ATACTTGAGTGTTTTAGTAGGTTTT | Sbal_2398 |
| -64 | 6.4 | ATACTTGACTGATTTACTCGGGTAT | ||
| Shewanella denitrificans OS217 | ||||
|
Position: -88
Score: 5.14002 Sequence: ATACTTGAGTAAAACACTAGGTTTA
Position: -63
Score: 6.44897 Sequence: ATACTTGACTAAATTACTCGGGTAT
Locus tag: Sden_1457
Name: iscR Funciton: Iron-sulfur cluster regulator IscR
Locus tag: Sden_1458
Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: Sden_1459
Name: iscU Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: Sden_1460
Name: iscA Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: Sden_1461
Name: hscB Funciton: Chaperone protein HscB
Locus tag: Sden_1462
Name: hscA Funciton: Chaperone protein HscA
Locus tag: Sden_1463
Name: fdx Funciton: ferredoxin, 2Fe-2S type, ISC system |
||||
| iscR-iscS-iscU-iscA-hscB-hscA-fdx | -88 | 5.1 | ATACTTGAGTAAAACACTAGGTTTA | Sden_1457 |
| -63 | 6.4 | ATACTTGACTAAATTACTCGGGTAT | ||
| Shewanella frigidimarina NCIMB 400 | ||||
|
Position: -89
Score: 4.51876 Sequence: ATACCCGAGTGTTTTGGTAGGATTA
Position: -64
Score: 6.16346 Sequence: ATACTTGACTAAATTACTAGGGTAT
Locus tag: Sfri_2425
Name: iscR Funciton: Iron-sulfur cluster regulator IscR
Locus tag: Sfri_2424
Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: Sfri_2423
Name: iscU Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: Sfri_2422
Name: iscA Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: Sfri_2421
Name: hscB Funciton: Chaperone protein HscB
Locus tag: Sfri_2420
Name: hscA Funciton: Chaperone protein HscA
Locus tag: Sfri_2419
Name: fdx Funciton: ferredoxin, 2Fe-2S type, ISC system |
||||
| iscR-iscS-iscU-iscA-hscB-hscA-fdx | -89 | 4.5 | ATACCCGAGTGTTTTGGTAGGATTA | Sfri_2425 |
| -64 | 6.2 | ATACTTGACTAAATTACTAGGGTAT | ||
| Shewanella halifaxensis HAW-EB4 | ||||
|
Position: -90
Score: 4.50889 Sequence: ATACCTGACCAAATAGCTAGGCTTA
Position: -65
Score: 5.95108 Sequence: ATACTTGACTGAAACGGTCGGGTAT
Locus tag: Shal_1571
Name: iscR Funciton: Iron-sulfur cluster regulator IscR
Locus tag: Shal_1572
Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: Shal_1573
Name: iscU Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: Shal_1574
Name: iscA Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: Shal_1575
Name: hscB Funciton: Chaperone protein HscB
Locus tag: Shal_1576
Name: hscA Funciton: Chaperone protein HscA
Locus tag: Shal_1577
Name: fdx Funciton: ferredoxin, 2Fe-2S type, ISC system |
||||
| iscR-iscS-iscU-iscA-hscB-hscA-fdx | -90 | 4.5 | ATACCTGACCAAATAGCTAGGCTTA | Shal_1571 |
| -65 | 6 | ATACTTGACTGAAACGGTCGGGTAT | ||
| Shewanella loihica PV-4 | ||||
|
Position: -90
Score: 5.05782 Sequence: ATACCTGACTAATCTGCTAGGTTTT
Position: -65
Score: 6.38991 Sequence: ATACTTGACTAAAACAGTCAAGTAT
Locus tag: Shew_2318
Name: iscR Funciton: Iron-sulfur cluster regulator IscR
Locus tag: Shew_2317
Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: Shew_2316
Name: iscU Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: Shew_2315
Name: iscA Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: Shew_2314
Name: hscB Funciton: Chaperone protein HscB
Locus tag: Shew_2313
Name: hscA Funciton: Chaperone protein HscA
Locus tag: Shew_2312
Name: fdx Funciton: ferredoxin, 2Fe-2S type, ISC system |
||||
| iscR-iscS-iscU-iscA-hscB-hscA-fdx | -90 | 5.1 | ATACCTGACTAATCTGCTAGGTTTT | Shew_2318 |
| -65 | 6.4 | ATACTTGACTAAAACAGTCAAGTAT | ||
| Shewanella oneidensis MR-1 | ||||
|
Position: -90
Score: 5.48351 Sequence: ATACTTGAGTGATTTACTAGGTTTT
Position: -65
Score: 6.36439 Sequence: ATACTTGACTGATTTACTCGGGTAT
Locus tag: SO_2263
Name: iscR Funciton: Iron-sulfur cluster regulator IscR
Locus tag: SO_2264
Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: SO_2265
Name: iscU Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: SO_2266
Name: iscA Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: SO_2267
Name: hscB Funciton: Chaperone protein HscB
Locus tag: SO_2268
Name: hscA Funciton: Chaperone protein HscA |
||||
| iscR-iscS-iscU-iscA-hscB-hscA | -90 | 5.5 | ATACTTGAGTGATTTACTAGGTTTT | SO_2263 |
| -65 | 6.4 | ATACTTGACTGATTTACTCGGGTAT | ||
| Shewanella pealeana ATCC 700345 | ||||
|
Position: -90
Score: 5.03724 Sequence: ATACTTGACCGAATTGCTAGGCTTT
Position: -65
Score: 6.38037 Sequence: ATACTTGACTAAAATAGTCGGGTAT
Locus tag: Spea_1487
Name: iscR Funciton: Iron-sulfur cluster regulator IscR
Locus tag: Spea_1488
Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: Spea_1489
Name: iscU Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: Spea_1490
Name: iscA Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: Spea_1491
Name: hscB Funciton: Chaperone protein HscB
Locus tag: Spea_1492
Name: hscA Funciton: Chaperone protein HscA
Locus tag: Spea_1493
Name: fdx Funciton: ferredoxin, 2Fe-2S type, ISC system |
||||
| iscR-iscS-iscU-iscA-hscB-hscA-fdx | -90 | 5 | ATACTTGACCGAATTGCTAGGCTTT | Spea_1487 |
| -65 | 6.4 | ATACTTGACTAAAATAGTCGGGTAT | ||
| Shewanella piezotolerans WP3 | ||||
|
Position: -90
Score: 5.1819 Sequence: ATACTTGACCAAACCACTAGGTTAA
Position: -65
Score: 6.53656 Sequence: ATACTTGACTAAATTACTCAGGTAT
Locus tag: swp_1693
Name: iscR Funciton: Iron-sulfur cluster regulator IscR
Locus tag: swp_1694
Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: swp_1695
Name: iscU Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: swp_1697
Name: iscA Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: swp_1698
Name: hscB Funciton: Chaperone protein HscB
Locus tag: swp_1699
Name: hscA Funciton: Chaperone protein HscA
Locus tag: swp_1700
Name: fdx Funciton: ferredoxin, 2Fe-2S type, ISC system |
||||
| iscR-iscS-iscU-iscA-hscB-hscA-fdx | -90 | 5.2 | ATACTTGACCAAACCACTAGGTTAA | swp_1693 |
| -65 | 6.5 | ATACTTGACTAAATTACTCAGGTAT | ||
| Shewanella putrefaciens CN-32 | ||||
|
Position: -91
Score: 4.30123 Sequence: TTACCTGAGTGTTTTAGTAGGACTT
Position: -66
Score: 6.44897 Sequence: ATACTTGACTAATTTACTCGGGTAT
Locus tag: Sputcn32_2150
Name: iscR Funciton: Iron-sulfur cluster regulator IscR
Locus tag: Sputcn32_2149
Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: Sputcn32_2148
Name: iscU Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: Sputcn32_2147
Name: iscA Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: Sputcn32_2146
Name: hscB Funciton: Chaperone protein HscB
Locus tag: Sputcn32_2145
Name: hscA Funciton: Chaperone protein HscA
Locus tag: Sputcn32_2144
Name: fdx Funciton: ferredoxin, 2Fe-2S type, ISC system |
||||
| iscR-iscS-iscU-iscA-hscB-hscA-fdx | -91 | 4.3 | TTACCTGAGTGTTTTAGTAGGACTT | Sputcn32_2150 |
| -66 | 6.4 | ATACTTGACTAATTTACTCGGGTAT | ||
| Shewanella sediminis HAW-EB3 | ||||
|
Position: -161
Score: 4.46036 Sequence: ATACCCCACCAAAGTGGCAGGGTAT
Position: -63
Score: 6.38037 Sequence: ATACTTGACTAAAATAGTCGGGTAT
Locus tag: Ssed_2872
Name: iscR Funciton: Iron-sulfur cluster regulator IscR
Locus tag: Ssed_2871
Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: Ssed_2870
Name: iscU Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: Ssed_2869
Name: iscA Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: Ssed_2868
Name: hscB Funciton: Chaperone protein HscB
Locus tag: Ssed_2867
Name: hscA Funciton: Chaperone protein HscA
Locus tag: Ssed_2866
Name: fdx Funciton: ferredoxin, 2Fe-2S type, ISC system |
||||
| iscR-iscS-iscU-iscA-hscB-hscA-fdx | -161 | 4.5 | ATACCCCACCAAAGTGGCAGGGTAT | Ssed_2872 |
| -63 | 6.4 | ATACTTGACTAAAATAGTCGGGTAT | ||
| Shewanella sp ANA-3 | ||||
|
Position: -90
Score: 5.38559 Sequence: ATACCTGAGTGTTTTACTAGGTTTT
Position: -65
Score: 6.273 Sequence: ATACTTGACTGAAATACTCGGGTAT
Locus tag: Shewana3_2281
Name: iscR Funciton: Iron-sulfur cluster regulator IscR
Locus tag: Shewana3_2280
Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: Shewana3_2279
Name: iscU Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: Shewana3_2278
Name: iscA Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: Shewana3_2277
Name: hscB Funciton: Chaperone protein HscB
Locus tag: Shewana3_2276
Name: hscA Funciton: Chaperone protein HscA
Locus tag: Shewana3_2275
Name: fdx Funciton: ferredoxin, 2Fe-2S type, ISC system |
||||
| iscR-iscS-iscU-iscA-hscB-hscA-fdx | -90 | 5.4 | ATACCTGAGTGTTTTACTAGGTTTT | Shewana3_2281 |
| -65 | 6.3 | ATACTTGACTGAAATACTCGGGTAT | ||
| Shewanella sp MR-4 | ||||
|
Position: -90
Score: 5.59506 Sequence: ATACTTGAGTATTTTACTAGGGTTT
Position: -65
Score: 6.36439 Sequence: ATACTTGACTGAATTACTCGGGTAT
Locus tag: Shewmr4_1738
Name: iscR Funciton: Iron-sulfur cluster regulator IscR
Locus tag: Shewmr4_1739
Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: Shewmr4_1740
Name: iscU Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: Shewmr4_1741
Name: iscA Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: Shewmr4_1742
Name: hscB Funciton: Chaperone protein HscB
Locus tag: Shewmr4_1743
Name: hscA Funciton: Chaperone protein HscA
Locus tag: Shewmr4_1744
Name: fdx Funciton: ferredoxin, 2Fe-2S type, ISC system |
||||
| iscR-iscS-iscU-iscA-hscB-hscA-fdx | -90 | 5.6 | ATACTTGAGTATTTTACTAGGGTTT | Shewmr4_1738 |
| -65 | 6.4 | ATACTTGACTGAATTACTCGGGTAT | ||
| Shewanella sp MR-7 | ||||
|
Position: -90
Score: 5.39212 Sequence: ATACTTGAGTGTTTTACTAGGTTTT
Position: -65
Score: 6.36059 Sequence: ATACTTGACTGAAATACTCAGGTAT
Locus tag: Shewmr7_1818
Name: iscR Funciton: Iron-sulfur cluster regulator IscR
Locus tag: Shewmr7_1819
Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: Shewmr7_1820
Name: iscU Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: Shewmr7_1821
Name: iscA Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: Shewmr7_1822
Name: hscB Funciton: Chaperone protein HscB
Locus tag: Shewmr7_1823
Name: hscA Funciton: Chaperone protein HscA
Locus tag: Shewmr7_1824
Name: fdx Funciton: ferredoxin, 2Fe-2S type, ISC system |
||||
| iscR-iscS-iscU-iscA-hscB-hscA-fdx | -90 | 5.4 | ATACTTGAGTGTTTTACTAGGTTTT | Shewmr7_1818 |
| -65 | 6.4 | ATACTTGACTGAAATACTCAGGTAT | ||
| Shewanella sp W3-18-1 | ||||
|
Position: -91
Score: 4.30123 Sequence: TTACCTGAGTGTTTTAGTAGGACTT
Position: -66
Score: 6.44897 Sequence: ATACTTGACTAATTTACTCGGGTAT
Locus tag: Sputw3181_1861
Name: iscR Funciton: Iron-sulfur cluster regulator IscR
Locus tag: Sputw3181_1862
Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: Sputw3181_1863
Name: iscU Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: Sputw3181_1864
Name: iscA Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: Sputw3181_1865
Name: hscB Funciton: Chaperone protein HscB
Locus tag: Sputw3181_1866
Name: hscA Funciton: Chaperone protein HscA
Locus tag: Sputw3181_1867
Name: fdx Funciton: ferredoxin, 2Fe-2S type, ISC system |
||||
| iscR-iscS-iscU-iscA-hscB-hscA-fdx | -91 | 4.3 | TTACCTGAGTGTTTTAGTAGGACTT | Sputw3181_1861 |
| -66 | 6.4 | ATACTTGACTAATTTACTCGGGTAT | ||
| Shewanella woodyi ATCC 51908 | ||||
|
Position: -215
Score: 4.10821 Sequence: TTTCGTGAGTATTATGGTAAAGATT
Position: -90
Score: 5.07237 Sequence: ATACTTGACTAAACTACTAGGTTTA
Position: -65
Score: 6.36059 Sequence: ATACTTGACTAAAACACTCAGGTAT
Locus tag: Swoo_1775
Name: iscR Funciton: Iron-sulfur cluster regulator IscR
Locus tag: Swoo_1776
Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: Swoo_1777
Name: iscU Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: Swoo_1778
Name: iscA Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: Swoo_1779
Name: hscB Funciton: Chaperone protein HscB
Locus tag: Swoo_1780
Name: hscA Funciton: Chaperone protein HscA
Locus tag: Swoo_1781
Name: fdx Funciton: ferredoxin, 2Fe-2S type, ISC system |
||||
| iscR-iscS-iscU-iscA-hscB-hscA-fdx | -215 | 4.1 | TTTCGTGAGTATTATGGTAAAGATT | Swoo_1775 |
| -90 | 5.1 | ATACTTGACTAAACTACTAGGTTTA | ||
| -65 | 6.4 | ATACTTGACTAAAACACTCAGGTAT | ||