Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing ygbA gene

Properties
Regulog: IscR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: Rrf2
Regulation mode: repressor
Biological process: Iron-sulfur cluster biogenesis
Effector: Iron-sulfur cluster redox state
Phylum: Proteobacteria/gamma
Built upon 93 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -30
Score: 5.12049
Sequence: AAAACCAAGTAAATTACTTGGGTAT
Locus tag: Sama_3326
Name: ygbA
Funciton: hypothetical protein involved in nitrosative stress
ygbA -30 5.1 AAAACCAAGTAAATTACTTGGGTAT Sama_3326
Shewanella baltica OS155
Position: -29
Score: 4.52745
Sequence: ATATCCGAGTGACAAGCTAAGGTAT
Locus tag: Sbal_4067
Name: ygbA
Funciton: hypothetical protein involved in nitrosative stress
ygbA -29 4.5 ATATCCGAGTGACAAGCTAAGGTAT Sbal_4067
Shewanella frigidimarina NCIMB 400
Position: -43
Score: 5.57281
Sequence: ATATCCGACTGTTTTACTAAGGTAT
Locus tag: Sfri_0404
Name: ygbA
Funciton: hypothetical protein involved in nitrosative stress
ygbA -43 5.6 ATATCCGACTGTTTTACTAAGGTAT Sfri_0404
Shewanella halifaxensis HAW-EB4
Position: -28
Score: 5.12765
Sequence: ATAACCCAGTAACTTACTAAGGTAT
Locus tag: Shal_3986
Name: ygbA
Funciton: hypothetical protein involved in nitrosative stress
ygbA -28 5.1 ATAACCCAGTAACTTACTAAGGTAT Shal_3986
Shewanella loihica PV-4
Position: -28
Score: 4.83325
Sequence: ATAACCCAGTAAAGAAGTCAGATAT
Locus tag: Shew_0259
Name: ygbA
Funciton: hypothetical protein involved in nitrosative stress
ygbA -28 4.8 ATAACCCAGTAAAGAAGTCAGATAT Shew_0259
Shewanella oneidensis MR-1
Position: -29
Score: 4.09269
Sequence: TTATCCGAGTCACAGACTAAGGTAT
Locus tag: SO_0324
Name: ygbA
Funciton: hypothetical protein involved in nitrosative stress
ygbA -29 4.1 TTATCCGAGTCACAGACTAAGGTAT SO_0324
Shewanella pealeana ATCC 700345
Position: -28
Score: 5.02174
Sequence: ATAACCAAGTAGCTTACTAAGGTAT
Locus tag: Spea_0303
Name: ygbA
Funciton: hypothetical protein involved in nitrosative stress
ygbA -28 5 ATAACCAAGTAGCTTACTAAGGTAT Spea_0303
Shewanella piezotolerans WP3
Position: -28
Score: 4.77666
Sequence: ATAACCCAGTGGCTTACTAAGGTAT
Locus tag: swp_2171
Name: ygbA
Funciton: hypothetical protein involved in nitrosative stress
ygbA -28 4.8 ATAACCCAGTGGCTTACTAAGGTAT swp_2171
Shewanella putrefaciens CN-32
Position: -29
Score: 4.87701
Sequence: ATATCCGAGTAACTGACTAAGGTAT
Locus tag: Sputcn32_3663
Name: ygbA
Funciton: hypothetical protein involved in nitrosative stress
ygbA -29 4.9 ATATCCGAGTAACTGACTAAGGTAT Sputcn32_3663
Shewanella sediminis HAW-EB3
Position: -125
Score: 5.36272
Sequence: GTACCTTAGTAATTTACTAGGGTAT
Locus tag: Ssed_4199
Name: ygbA
Funciton: hypothetical protein involved in nitrosative stress
ygbA -125 5.4 GTACCTTAGTAATTTACTAGGGTAT Ssed_4199
Shewanella sp ANA-3
Position: -29
Score: 4.44894
Sequence: TTATCCGAGTGACAGACTAAGGTAT
Locus tag: Shewana3_3845
Name: ygbA
Funciton: hypothetical protein involved in nitrosative stress
ygbA -29 4.4 TTATCCGAGTGACAGACTAAGGTAT Shewana3_3845
Shewanella sp MR-4
Position: -29
Score: 4.44894
Sequence: TTATCCGAGTGACAGACTAAGGTAT
Locus tag: Shewmr4_3649
Name: ygbA
Funciton: hypothetical protein involved in nitrosative stress
ygbA -29 4.4 TTATCCGAGTGACAGACTAAGGTAT Shewmr4_3649
Shewanella sp MR-7
Position: -29
Score: 4.44894
Sequence: TTATCCGAGTGACAGACTAAGGTAT
Locus tag: Shewmr7_0295
Name: ygbA
Funciton: hypothetical protein involved in nitrosative stress
ygbA -29 4.4 TTATCCGAGTGACAGACTAAGGTAT Shewmr7_0295
Shewanella sp W3-18-1
Position: -29
Score: 4.87701
Sequence: ATATCCGAGTAACTGACTAAGGTAT
Locus tag: Sputw3181_3804
Name: ygbA
Funciton: hypothetical protein involved in nitrosative stress
ygbA -29 4.9 ATATCCGAGTAACTGACTAAGGTAT Sputw3181_3804
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