Orthologous regulated operons containing SO0080 gene

Properties
Regulog:	PsrA - Shewanellaceae
Regulator type:	Transcription factor
Regulator family:	TetR
Regulation mode:	repressor
Biological process:	Fatty acid degradation
Effector:	Oleate
Phylum:	Proteobacteria/gamma

Built upon 295 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -21 Score: 5.44705 Sequence: TGTTAAACAATCGTTTGAAT Locus tag: Sama_0073 Name: SO0080 Funciton: thioesterase superfamily protein
SO0080	-21	5.4	TGTTAAACAATCGTTTGAAT	Sama_0073
Shewanella denitrificans OS217
Position: -20 Score: 5.26322 Sequence: TACCAAACGAGCGTTTAAAT Locus tag: Sden_0074 Name: SO0080 Funciton: thioesterase superfamily protein
SO0080	-20	5.3	TACCAAACGAGCGTTTAAAT	Sden_0074
Shewanella frigidimarina NCIMB 400
Position: -44 Score: 6.05011 Sequence: ATTTAAACAAGCGTTTAATT Locus tag: Sfri_3968 Name: SO0080 Funciton: thioesterase superfamily protein
SO0080	-44	6.1	ATTTAAACAAGCGTTTAATT	Sfri_3968
Shewanella halifaxensis HAW-EB4
Position: -47 Score: 5.58552 Sequence: AATTAAACAGCTGTTTAAAC Locus tag: Shal_0066 Name: SO0080 Funciton: thioesterase superfamily protein
SO0080	-47	5.6	AATTAAACAGCTGTTTAAAC	Shal_0066
Shewanella loihica PV-4
Position: -35 Score: 5.35843 Sequence: AACTAAACACTTGTTTGAAA Locus tag: Shew_3772 Name: SO0080 Funciton: thioesterase superfamily protein
SO0080	-35	5.4	AACTAAACACTTGTTTGAAA	Shew_3772
Shewanella pealeana ATCC 700345
Position: -70 Score: 5.85477 Sequence: AGTTAAACAGCCGTTTAAAT Locus tag: Spea_4183 Name: SO0080 Funciton: thioesterase superfamily protein
SO0080	-70	5.9	AGTTAAACAGCCGTTTAAAT	Spea_4183
Shewanella piezotolerans WP3
Position: -49 Score: 5.75672 Sequence: AATCAAACAACCGTTTGAAA Locus tag: swp_0119 Name: SO0080 Funciton: thioesterase superfamily protein
SO0080	-49	5.8	AATCAAACAACCGTTTGAAA	swp_0119
Shewanella sediminis HAW-EB3
Position: -32 Score: 5.75825 Sequence: AGTTAAACAACCGTTTGAAT Locus tag: Ssed_4456 Name: SO0080 Funciton: thioesterase superfamily protein
SO0080	-32	5.8	AGTTAAACAACCGTTTGAAT	Ssed_4456
Shewanella woodyi ATCC 51908
Position: -50 Score: 5.67902 Sequence: AGTCAAACGCATGTTTGAAT Locus tag: Swoo_4857 Name: SO0080 Funciton: thioesterase superfamily protein
SO0080	-50	5.7	AGTCAAACGCATGTTTGAAT	Swoo_4857

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Orthologous regulated operons containing SO0080 gene

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --