Orthologous regulated operons containing sdhA gene
Regulog: | PsrA - Shewanellaceae |
Regulator type: | Transcription factor |
Regulator family: | TetR |
Regulation mode: | repressor |
Biological process: | Fatty acid degradation |
Effector: | Oleate |
Phylum: | Proteobacteria/gamma |
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Operon | Position | Score | Sequence | Locus Tag of the First Gene |
---|---|---|---|---|
Shewanella amazonensis SB2B | ||||
Position: -327
Score: 5.71894 Sequence: ATTTAAATAAGCGTTTAAAT
Locus tag: Sama_1423
Name: sdhC Funciton: succinate dehydrogenase, cytochrome b556 subunit
Locus tag: Sama_1424
Name: sdhD Funciton: succinate dehydrogenase subunit D
Locus tag: Sama_1425
Name: sdhA Funciton: succinate dehydrogenase, flavoprotein subunit
Locus tag: Sama_1426
Name: sdhB Funciton: succinate dehydrogenase, iron-sulfur protein |
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sdhC-sdhD-sdhA-sdhB | -327 | 5.7 | ATTTAAATAAGCGTTTAAAT | Sama_1423 |
Shewanella baltica OS155 | ||||
Position: -330
Score: 5.71894 Sequence: ATTTAAATAAGCGTTTAAAT
Locus tag: Sbal_2519
Name: sdhC Funciton: succinate dehydrogenase, cytochrome b556 subunit
Locus tag: Sbal_2518
Name: sdhD Funciton: succinate dehydrogenase subunit D
Locus tag: Sbal_2517
Name: sdhA Funciton: succinate dehydrogenase, flavoprotein subunit
Locus tag: Sbal_2516
Name: sdhB Funciton: succinate dehydrogenase, iron-sulfur protein |
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sdhC-sdhD-sdhA-sdhB | -330 | 5.7 | ATTTAAATAAGCGTTTAAAT | Sbal_2519 |
Shewanella denitrificans OS217 | ||||
Position: -374
Score: 5.57696 Sequence: ATTTAAATAAGCGTTTAATT
Locus tag: Sden_2187
Name: sdhC Funciton: succinate dehydrogenase, cytochrome b556 subunit
Locus tag: Sden_2186
Name: sdhD Funciton: succinate dehydrogenase subunit D
Locus tag: Sden_2185
Name: sdhA Funciton: succinate dehydrogenase, flavoprotein subunit
Locus tag: Sden_2184
Name: sdhB Funciton: succinate dehydrogenase, iron-sulfur protein |
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sdhC-sdhD-sdhA-sdhB | -374 | 5.6 | ATTTAAATAAGCGTTTAATT | Sden_2187 |
Shewanella frigidimarina NCIMB 400 | ||||
Position: -324
Score: 5.71894 Sequence: ATTTAAATAAGCGTTTAAAT
Locus tag: Sfri_2347
Name: sdhC Funciton: succinate dehydrogenase, cytochrome b556 subunit
Locus tag: Sfri_2346
Name: sdhD Funciton: succinate dehydrogenase subunit D
Locus tag: Sfri_2345
Name: sdhA Funciton: succinate dehydrogenase, flavoprotein subunit
Locus tag: Sfri_2344
Name: sdhB Funciton: succinate dehydrogenase, iron-sulfur protein |
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sdhC-sdhD-sdhA-sdhB | -324 | 5.7 | ATTTAAATAAGCGTTTAAAT | Sfri_2347 |
Shewanella halifaxensis HAW-EB4 | ||||
Position: -350
Score: 5.71894 Sequence: ATTTAAATAAGCGTTTAAAT
Locus tag: Shal_2493
Name: sdhC Funciton: succinate dehydrogenase, cytochrome b556 subunit
Locus tag: Shal_2492
Name: sdhD Funciton: succinate dehydrogenase subunit D
Locus tag: Shal_2491
Name: sdhA Funciton: succinate dehydrogenase, flavoprotein subunit
Locus tag: Shal_2490
Name: sdhB Funciton: succinate dehydrogenase, iron-sulfur protein |
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sdhC-sdhD-sdhA-sdhB | -350 | 5.7 | ATTTAAATAAGCGTTTAAAT | Shal_2493 |
Shewanella loihica PV-4 | ||||
Position: -329
Score: 5.76654 Sequence: ATTTAAATAAGTGTTTAAAT
Locus tag: Shew_1651
Name: sdhC Funciton: succinate dehydrogenase, cytochrome b556 subunit
Locus tag: Shew_1652
Name: sdhD Funciton: succinate dehydrogenase subunit D
Locus tag: Shew_1653
Name: sdhA Funciton: succinate dehydrogenase, flavoprotein subunit
Locus tag: Shew_1654
Name: sdhB Funciton: succinate dehydrogenase, iron-sulfur protein |
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sdhC-sdhD-sdhA-sdhB | -329 | 5.8 | ATTTAAATAAGTGTTTAAAT | Shew_1651 |
Shewanella oneidensis MR-1 | ||||
Position: -331
Score: 5.71894 Sequence: ATTTAAATAAGCGTTTAAAT
Locus tag: SO_1927
Name: sdhC Funciton: succinate dehydrogenase, cytochrome b556 subunit
Locus tag: SO_1927.1
Name: sdhD Funciton: succinate dehydrogenase subunit D
Locus tag: SO_1928
Name: sdhA Funciton: succinate dehydrogenase, flavoprotein subunit
Locus tag: SO_1929
Name: sdhB Funciton: succinate dehydrogenase, iron-sulfur protein |
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sdhC-sdhD-sdhA-sdhB | -331 | 5.7 | ATTTAAATAAGCGTTTAAAT | SO_1927 |
Shewanella pealeana ATCC 700345 | ||||
Position: -351
Score: 5.71894 Sequence: ATTTAAATAAGCGTTTAAAT
Locus tag: Spea_1784
Name: sdhC Funciton: succinate dehydrogenase, cytochrome b556 subunit
Locus tag: Spea_1785
Name: sdhD Funciton: succinate dehydrogenase subunit D
Locus tag: Spea_1786
Name: sdhA Funciton: succinate dehydrogenase, flavoprotein subunit
Locus tag: Spea_1787
Name: sdhB Funciton: succinate dehydrogenase, iron-sulfur protein |
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sdhC-sdhD-sdhA-sdhB | -351 | 5.7 | ATTTAAATAAGCGTTTAAAT | Spea_1784 |
Shewanella piezotolerans WP3 | ||||
Position: -284
Score: 5.71894 Sequence: ATTTAAATAAGCGTTTAAAT
Locus tag: swp_2955
Name: sdhC Funciton: succinate dehydrogenase, cytochrome b556 subunit
Locus tag: swp_2953
Name: sdhD Funciton: succinate dehydrogenase subunit D
Locus tag: swp_2952
Name: sdhA Funciton: succinate dehydrogenase, flavoprotein subunit
Locus tag: swp_2950
Name: sdhB Funciton: succinate dehydrogenase, iron-sulfur protein |
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sdhC-sdhD-sdhA-sdhB | -284 | 5.7 | ATTTAAATAAGCGTTTAAAT | swp_2955 |
Shewanella putrefaciens CN-32 | ||||
Position: -331
Score: 5.71894 Sequence: ATTTAAATAAGCGTTTAAAT
Locus tag: Sputcn32_2273
Name: sdhC Funciton: succinate dehydrogenase, cytochrome b556 subunit
Locus tag: Sputcn32_2272
Name: sdhD Funciton: succinate dehydrogenase subunit D
Locus tag: Sputcn32_2271
Name: sdhA Funciton: succinate dehydrogenase, flavoprotein subunit
Locus tag: Sputcn32_2270
Name: sdhB Funciton: succinate dehydrogenase, iron-sulfur protein |
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sdhC-sdhD-sdhA-sdhB | -331 | 5.7 | ATTTAAATAAGCGTTTAAAT | Sputcn32_2273 |
Shewanella sediminis HAW-EB3 | ||||
Position: -349
Score: 5.76654 Sequence: ATTTAAATAAGTGTTTAAAT
Locus tag: Ssed_2818
Name: sdhC Funciton: succinate dehydrogenase, cytochrome b556 subunit
Locus tag: Ssed_2817
Name: sdhD Funciton: succinate dehydrogenase subunit D
Locus tag: Ssed_2816
Name: sdhA Funciton: succinate dehydrogenase, flavoprotein subunit
Locus tag: Ssed_2815
Name: sdhB Funciton: succinate dehydrogenase, iron-sulfur protein |
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sdhC-sdhD-sdhA-sdhB | -349 | 5.8 | ATTTAAATAAGTGTTTAAAT | Ssed_2818 |
Shewanella sp ANA-3 | ||||
Position: -331
Score: 5.71894 Sequence: ATTTAAATAAGCGTTTAAAT
Locus tag: Shewana3_1706
Name: sdhC Funciton: succinate dehydrogenase, cytochrome b556 subunit
Locus tag: Shewana3_1707
Name: sdhD Funciton: succinate dehydrogenase subunit D
Locus tag: Shewana3_1708
Name: sdhA Funciton: succinate dehydrogenase, flavoprotein subunit
Locus tag: Shewana3_1709
Name: sdhB Funciton: succinate dehydrogenase, iron-sulfur protein |
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sdhC-sdhD-sdhA-sdhB | -331 | 5.7 | ATTTAAATAAGCGTTTAAAT | Shewana3_1706 |
Shewanella sp MR-4 | ||||
Position: -331
Score: 5.71894 Sequence: ATTTAAATAAGCGTTTAAAT
Locus tag: Shewmr4_1631
Name: sdhC Funciton: succinate dehydrogenase, cytochrome b556 subunit
Locus tag: Shewmr4_1632
Name: sdhD Funciton: succinate dehydrogenase subunit D
Locus tag: Shewmr4_1633
Name: sdhA Funciton: succinate dehydrogenase, flavoprotein subunit
Locus tag: Shewmr4_1634
Name: sdhB Funciton: succinate dehydrogenase, iron-sulfur protein |
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sdhC-sdhD-sdhA-sdhB | -331 | 5.7 | ATTTAAATAAGCGTTTAAAT | Shewmr4_1631 |
Shewanella sp MR-7 | ||||
Position: -331
Score: 5.71894 Sequence: ATTTAAATAAGCGTTTAAAT
Locus tag: Shewmr7_1706
Name: sdhC Funciton: succinate dehydrogenase, cytochrome b556 subunit
Locus tag: Shewmr7_1707
Name: sdhD Funciton: succinate dehydrogenase subunit D
Locus tag: Shewmr7_1708
Name: sdhA Funciton: succinate dehydrogenase, flavoprotein subunit
Locus tag: Shewmr7_1709
Name: sdhB Funciton: succinate dehydrogenase, iron-sulfur protein |
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sdhC-sdhD-sdhA-sdhB | -331 | 5.7 | ATTTAAATAAGCGTTTAAAT | Shewmr7_1706 |
Shewanella sp W3-18-1 | ||||
Position: -331
Score: 5.71894 Sequence: ATTTAAATAAGCGTTTAAAT
Locus tag: Sputw3181_1735
Name: sdhC Funciton: succinate dehydrogenase, cytochrome b556 subunit
Locus tag: Sputw3181_1736
Name: sdhD Funciton: succinate dehydrogenase subunit D
Locus tag: Sputw3181_1737
Name: sdhA Funciton: succinate dehydrogenase, flavoprotein subunit
Locus tag: Sputw3181_1738
Name: sdhB Funciton: succinate dehydrogenase, iron-sulfur protein |
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sdhC-sdhD-sdhA-sdhB | -331 | 5.7 | ATTTAAATAAGCGTTTAAAT | Sputw3181_1735 |
Shewanella woodyi ATCC 51908 | ||||
Position: -351
Score: 5.73778 Sequence: ATTTAAATAACCGTTTAAAT
Locus tag: Swoo_1833
Name: sdhC Funciton: succinate dehydrogenase, cytochrome b556 subunit
Locus tag: Swoo_1834
Name: sdhD Funciton: succinate dehydrogenase subunit D
Locus tag: Swoo_1835
Name: sdhA Funciton: succinate dehydrogenase, flavoprotein subunit
Locus tag: Swoo_1836
Name: sdhB Funciton: succinate dehydrogenase, iron-sulfur protein |
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sdhC-sdhD-sdhA-sdhB | -351 | 5.7 | ATTTAAATAACCGTTTAAAT | Swoo_1833 |