Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing sdhC gene

Properties
Regulog: PsrA - Shewanellaceae
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode: repressor
Biological process: Fatty acid degradation
Effector: Oleate
Phylum: Proteobacteria/gamma
Built upon 295 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -327
Score: 5.71894
Sequence: ATTTAAATAAGCGTTTAAAT
Locus tag: Sama_1423
Name: sdhC
Funciton: succinate dehydrogenase, cytochrome b556 subunit
Locus tag: Sama_1424
Name: sdhD
Funciton: succinate dehydrogenase subunit D
Locus tag: Sama_1425
Name: sdhA
Funciton: succinate dehydrogenase, flavoprotein subunit
Locus tag: Sama_1426
Name: sdhB
Funciton: succinate dehydrogenase, iron-sulfur protein
sdhC-sdhD-sdhA-sdhB -327 5.7 ATTTAAATAAGCGTTTAAAT Sama_1423
Shewanella baltica OS155
Position: -330
Score: 5.71894
Sequence: ATTTAAATAAGCGTTTAAAT
Locus tag: Sbal_2519
Name: sdhC
Funciton: succinate dehydrogenase, cytochrome b556 subunit
Locus tag: Sbal_2518
Name: sdhD
Funciton: succinate dehydrogenase subunit D
Locus tag: Sbal_2517
Name: sdhA
Funciton: succinate dehydrogenase, flavoprotein subunit
Locus tag: Sbal_2516
Name: sdhB
Funciton: succinate dehydrogenase, iron-sulfur protein
sdhC-sdhD-sdhA-sdhB -330 5.7 ATTTAAATAAGCGTTTAAAT Sbal_2519
Shewanella denitrificans OS217
Position: -374
Score: 5.57696
Sequence: ATTTAAATAAGCGTTTAATT
Locus tag: Sden_2187
Name: sdhC
Funciton: succinate dehydrogenase, cytochrome b556 subunit
Locus tag: Sden_2186
Name: sdhD
Funciton: succinate dehydrogenase subunit D
Locus tag: Sden_2185
Name: sdhA
Funciton: succinate dehydrogenase, flavoprotein subunit
Locus tag: Sden_2184
Name: sdhB
Funciton: succinate dehydrogenase, iron-sulfur protein
sdhC-sdhD-sdhA-sdhB -374 5.6 ATTTAAATAAGCGTTTAATT Sden_2187
Shewanella frigidimarina NCIMB 400
Position: -324
Score: 5.71894
Sequence: ATTTAAATAAGCGTTTAAAT
Locus tag: Sfri_2347
Name: sdhC
Funciton: succinate dehydrogenase, cytochrome b556 subunit
Locus tag: Sfri_2346
Name: sdhD
Funciton: succinate dehydrogenase subunit D
Locus tag: Sfri_2345
Name: sdhA
Funciton: succinate dehydrogenase, flavoprotein subunit
Locus tag: Sfri_2344
Name: sdhB
Funciton: succinate dehydrogenase, iron-sulfur protein
sdhC-sdhD-sdhA-sdhB -324 5.7 ATTTAAATAAGCGTTTAAAT Sfri_2347
Shewanella halifaxensis HAW-EB4
Position: -350
Score: 5.71894
Sequence: ATTTAAATAAGCGTTTAAAT
Locus tag: Shal_2493
Name: sdhC
Funciton: succinate dehydrogenase, cytochrome b556 subunit
Locus tag: Shal_2492
Name: sdhD
Funciton: succinate dehydrogenase subunit D
Locus tag: Shal_2491
Name: sdhA
Funciton: succinate dehydrogenase, flavoprotein subunit
Locus tag: Shal_2490
Name: sdhB
Funciton: succinate dehydrogenase, iron-sulfur protein
sdhC-sdhD-sdhA-sdhB -350 5.7 ATTTAAATAAGCGTTTAAAT Shal_2493
Shewanella loihica PV-4
Position: -329
Score: 5.76654
Sequence: ATTTAAATAAGTGTTTAAAT
Locus tag: Shew_1651
Name: sdhC
Funciton: succinate dehydrogenase, cytochrome b556 subunit
Locus tag: Shew_1652
Name: sdhD
Funciton: succinate dehydrogenase subunit D
Locus tag: Shew_1653
Name: sdhA
Funciton: succinate dehydrogenase, flavoprotein subunit
Locus tag: Shew_1654
Name: sdhB
Funciton: succinate dehydrogenase, iron-sulfur protein
sdhC-sdhD-sdhA-sdhB -329 5.8 ATTTAAATAAGTGTTTAAAT Shew_1651
Shewanella oneidensis MR-1
Position: -331
Score: 5.71894
Sequence: ATTTAAATAAGCGTTTAAAT
Locus tag: SO_1927
Name: sdhC
Funciton: succinate dehydrogenase, cytochrome b556 subunit
Locus tag: SO_1927.1
Name: sdhD
Funciton: succinate dehydrogenase subunit D
Locus tag: SO_1928
Name: sdhA
Funciton: succinate dehydrogenase, flavoprotein subunit
Locus tag: SO_1929
Name: sdhB
Funciton: succinate dehydrogenase, iron-sulfur protein
sdhC-sdhD-sdhA-sdhB -331 5.7 ATTTAAATAAGCGTTTAAAT SO_1927
Shewanella pealeana ATCC 700345
Position: -351
Score: 5.71894
Sequence: ATTTAAATAAGCGTTTAAAT
Locus tag: Spea_1784
Name: sdhC
Funciton: succinate dehydrogenase, cytochrome b556 subunit
Locus tag: Spea_1785
Name: sdhD
Funciton: succinate dehydrogenase subunit D
Locus tag: Spea_1786
Name: sdhA
Funciton: succinate dehydrogenase, flavoprotein subunit
Locus tag: Spea_1787
Name: sdhB
Funciton: succinate dehydrogenase, iron-sulfur protein
sdhC-sdhD-sdhA-sdhB -351 5.7 ATTTAAATAAGCGTTTAAAT Spea_1784
Shewanella piezotolerans WP3
Position: -284
Score: 5.71894
Sequence: ATTTAAATAAGCGTTTAAAT
Locus tag: swp_2955
Name: sdhC
Funciton: succinate dehydrogenase, cytochrome b556 subunit
Locus tag: swp_2953
Name: sdhD
Funciton: succinate dehydrogenase subunit D
Locus tag: swp_2952
Name: sdhA
Funciton: succinate dehydrogenase, flavoprotein subunit
Locus tag: swp_2950
Name: sdhB
Funciton: succinate dehydrogenase, iron-sulfur protein
sdhC-sdhD-sdhA-sdhB -284 5.7 ATTTAAATAAGCGTTTAAAT swp_2955
Shewanella putrefaciens CN-32
Position: -331
Score: 5.71894
Sequence: ATTTAAATAAGCGTTTAAAT
Locus tag: Sputcn32_2273
Name: sdhC
Funciton: succinate dehydrogenase, cytochrome b556 subunit
Locus tag: Sputcn32_2272
Name: sdhD
Funciton: succinate dehydrogenase subunit D
Locus tag: Sputcn32_2271
Name: sdhA
Funciton: succinate dehydrogenase, flavoprotein subunit
Locus tag: Sputcn32_2270
Name: sdhB
Funciton: succinate dehydrogenase, iron-sulfur protein
sdhC-sdhD-sdhA-sdhB -331 5.7 ATTTAAATAAGCGTTTAAAT Sputcn32_2273
Shewanella sediminis HAW-EB3
Position: -349
Score: 5.76654
Sequence: ATTTAAATAAGTGTTTAAAT
Locus tag: Ssed_2818
Name: sdhC
Funciton: succinate dehydrogenase, cytochrome b556 subunit
Locus tag: Ssed_2817
Name: sdhD
Funciton: succinate dehydrogenase subunit D
Locus tag: Ssed_2816
Name: sdhA
Funciton: succinate dehydrogenase, flavoprotein subunit
Locus tag: Ssed_2815
Name: sdhB
Funciton: succinate dehydrogenase, iron-sulfur protein
sdhC-sdhD-sdhA-sdhB -349 5.8 ATTTAAATAAGTGTTTAAAT Ssed_2818
Shewanella sp ANA-3
Position: -331
Score: 5.71894
Sequence: ATTTAAATAAGCGTTTAAAT
Locus tag: Shewana3_1706
Name: sdhC
Funciton: succinate dehydrogenase, cytochrome b556 subunit
Locus tag: Shewana3_1707
Name: sdhD
Funciton: succinate dehydrogenase subunit D
Locus tag: Shewana3_1708
Name: sdhA
Funciton: succinate dehydrogenase, flavoprotein subunit
Locus tag: Shewana3_1709
Name: sdhB
Funciton: succinate dehydrogenase, iron-sulfur protein
sdhC-sdhD-sdhA-sdhB -331 5.7 ATTTAAATAAGCGTTTAAAT Shewana3_1706
Shewanella sp MR-4
Position: -331
Score: 5.71894
Sequence: ATTTAAATAAGCGTTTAAAT
Locus tag: Shewmr4_1631
Name: sdhC
Funciton: succinate dehydrogenase, cytochrome b556 subunit
Locus tag: Shewmr4_1632
Name: sdhD
Funciton: succinate dehydrogenase subunit D
Locus tag: Shewmr4_1633
Name: sdhA
Funciton: succinate dehydrogenase, flavoprotein subunit
Locus tag: Shewmr4_1634
Name: sdhB
Funciton: succinate dehydrogenase, iron-sulfur protein
sdhC-sdhD-sdhA-sdhB -331 5.7 ATTTAAATAAGCGTTTAAAT Shewmr4_1631
Shewanella sp MR-7
Position: -331
Score: 5.71894
Sequence: ATTTAAATAAGCGTTTAAAT
Locus tag: Shewmr7_1706
Name: sdhC
Funciton: succinate dehydrogenase, cytochrome b556 subunit
Locus tag: Shewmr7_1707
Name: sdhD
Funciton: succinate dehydrogenase subunit D
Locus tag: Shewmr7_1708
Name: sdhA
Funciton: succinate dehydrogenase, flavoprotein subunit
Locus tag: Shewmr7_1709
Name: sdhB
Funciton: succinate dehydrogenase, iron-sulfur protein
sdhC-sdhD-sdhA-sdhB -331 5.7 ATTTAAATAAGCGTTTAAAT Shewmr7_1706
Shewanella sp W3-18-1
Position: -331
Score: 5.71894
Sequence: ATTTAAATAAGCGTTTAAAT
Locus tag: Sputw3181_1735
Name: sdhC
Funciton: succinate dehydrogenase, cytochrome b556 subunit
Locus tag: Sputw3181_1736
Name: sdhD
Funciton: succinate dehydrogenase subunit D
Locus tag: Sputw3181_1737
Name: sdhA
Funciton: succinate dehydrogenase, flavoprotein subunit
Locus tag: Sputw3181_1738
Name: sdhB
Funciton: succinate dehydrogenase, iron-sulfur protein
sdhC-sdhD-sdhA-sdhB -331 5.7 ATTTAAATAAGCGTTTAAAT Sputw3181_1735
Shewanella woodyi ATCC 51908
Position: -351
Score: 5.73778
Sequence: ATTTAAATAACCGTTTAAAT
Locus tag: Swoo_1833
Name: sdhC
Funciton: succinate dehydrogenase, cytochrome b556 subunit
Locus tag: Swoo_1834
Name: sdhD
Funciton: succinate dehydrogenase subunit D
Locus tag: Swoo_1835
Name: sdhA
Funciton: succinate dehydrogenase, flavoprotein subunit
Locus tag: Swoo_1836
Name: sdhB
Funciton: succinate dehydrogenase, iron-sulfur protein
sdhC-sdhD-sdhA-sdhB -351 5.7 ATTTAAATAACCGTTTAAAT Swoo_1833
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