Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing deoB gene

Properties
Regulog: HexR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: RpiR
Regulation mode: repressor (activator)
Biological process: Central carbohydrate metabolism
Effector: 2-keto-3-deoxy-6-phosphogluconate
Phylum: Proteobacteria/gamma
Built upon 316 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -85
Score: 5.03814
Sequence: CTGTAATATTTTTACAG
Locus tag: Sama_0974
Name: deoA
Funciton: Thymidine phosphorylase (EC 2.4.2.4)
Locus tag: Sama_0975
Name: deoB
Funciton: Phosphopentomutase (EC 5.4.2.7)
Locus tag: Sama_0976
Name: deoD
Funciton: Purine nucleoside phosphorylase (EC 2.4.2.1)
deoA-deoB-deoD -85 5 CTGTAATATTTTTACAG Sama_0974
Shewanella baltica OS155
Position: -86
Score: 4.94086
Sequence: TTGTAATATTGCTACAG
Locus tag: Sbal_3226
Name: deoA
Funciton: Thymidine phosphorylase (EC 2.4.2.4)
Locus tag: Sbal_3225
Name: deoB
Funciton: Phosphopentomutase (EC 5.4.2.7)
Locus tag: Sbal_3224
Name: deoD
Funciton: Purine nucleoside phosphorylase (EC 2.4.2.1)
deoA-deoB-deoD -86 4.9 TTGTAATATTGCTACAG Sbal_3226
Shewanella halifaxensis HAW-EB4
Position: -94
Score: 4.52463
Sequence: ATGTAACAATATTACGG
Locus tag: Shal_3135
Name: deoA
Funciton: Thymidine phosphorylase (EC 2.4.2.4)
Locus tag: Shal_3134
Name: deoB
Funciton: Phosphopentomutase (EC 5.4.2.7)
Locus tag: Shal_3133
Name: deoD
Funciton: Purine nucleoside phosphorylase (EC 2.4.2.1)
deoA-deoB-deoD -94 4.5 ATGTAACAATATTACGG Shal_3135
Shewanella loihica PV-4
Position: -85
Score: 4.64184
Sequence: TCGTAATTAAATTACGG
Locus tag: Shew_2814
Name: deoA
Funciton: Thymidine phosphorylase (EC 2.4.2.4)
Locus tag: Shew_2813
Name: deoB
Funciton: Phosphopentomutase (EC 5.4.2.7)
Locus tag: Shew_2812
Name: deoD
Funciton: Purine nucleoside phosphorylase (EC 2.4.2.1)
deoA-deoB-deoD -85 4.6 TCGTAATTAAATTACGG Shew_2814
Shewanella oneidensis MR-1
Position: -85
Score: 4.94086
Sequence: TTGTAATATTGCTACAG
Locus tag: SO_1218
Name: deoA
Funciton: Thymidine phosphorylase (EC 2.4.2.4)
Locus tag: SO_1219
Name: deoB
Funciton: Phosphopentomutase (EC 5.4.2.7)
Locus tag: SO_1221
Name: deoD
Funciton: Purine nucleoside phosphorylase (EC 2.4.2.1)
deoA-deoB-deoD -85 4.9 TTGTAATATTGCTACAG SO_1218
Shewanella pealeana ATCC 700345
Position: -94
Score: 4.73079
Sequence: ATGTAACAATATTACGA
Locus tag: Spea_3047
Name: deoA
Funciton: Thymidine phosphorylase (EC 2.4.2.4)
Locus tag: Spea_3046
Name: deoB
Funciton: Phosphopentomutase (EC 5.4.2.7)
Locus tag: Spea_3045
Name: deoD
Funciton: Purine nucleoside phosphorylase (EC 2.4.2.1)
deoA-deoB-deoD -94 4.7 ATGTAACAATATTACGA Spea_3047
Shewanella piezotolerans WP3
Position: -103
Score: 4.03684
Sequence: CCGTTATTATGTAACAA
Position: -95
Score: 4.52463
Sequence: ATGTAACAATATTACGG
Locus tag: swp_1230
Name: deoA
Funciton: Thymidine phosphorylase (EC 2.4.2.4)
Locus tag: swp_1231
Name: deoB
Funciton: Phosphopentomutase (EC 5.4.2.7)
Locus tag: swp_1232
Name: deoD
Funciton: Purine nucleoside phosphorylase (EC 2.4.2.1)
deoA-deoB-deoD -103 4 CCGTTATTATGTAACAA swp_1230
-95 4.5 ATGTAACAATATTACGG
Shewanella putrefaciens CN-32
Position: -86
Score: 4.94086
Sequence: TTGTAATATTGCTACAG
Locus tag: Sputcn32_2821
Name: deoA
Funciton: Thymidine phosphorylase (EC 2.4.2.4)
Locus tag: Sputcn32_2820
Name: deoB
Funciton: Phosphopentomutase (EC 5.4.2.7)
Locus tag: Sputcn32_2819
Name: deoD
Funciton: Purine nucleoside phosphorylase (EC 2.4.2.1)
deoA-deoB-deoD -86 4.9 TTGTAATATTGCTACAG Sputcn32_2821
Shewanella sediminis HAW-EB3
Position: -85
Score: 5.15606
Sequence: TTGTAATTAAATTACGT
Locus tag: Ssed_3377
Name: deoA
Funciton: Thymidine phosphorylase (EC 2.4.2.4)
Locus tag: Ssed_3376
Name: deoB
Funciton: Phosphopentomutase (EC 5.4.2.7)
Locus tag: Ssed_3375
Name: deoD
Funciton: Purine nucleoside phosphorylase (EC 2.4.2.1)
deoA-deoB-deoD -85 5.2 TTGTAATTAAATTACGT Ssed_3377
Shewanella sp ANA-3
Position: -85
Score: 4.94086
Sequence: TTGTAATATTGCTACAG
Locus tag: Shewana3_1042
Name: deoA
Funciton: Thymidine phosphorylase (EC 2.4.2.4)
Locus tag: Shewana3_1043
Name: deoB
Funciton: Phosphopentomutase (EC 5.4.2.7)
Locus tag: Shewana3_1044
Name: deoD
Funciton: Purine nucleoside phosphorylase (EC 2.4.2.1)
deoA-deoB-deoD -85 4.9 TTGTAATATTGCTACAG Shewana3_1042
Shewanella sp MR-4
Position: -85
Score: 4.94086
Sequence: TTGTAATATTGCTACAG
Locus tag: Shewmr4_1038
Name: deoA
Funciton: Thymidine phosphorylase (EC 2.4.2.4)
Locus tag: Shewmr4_1039
Name: deoB
Funciton: Phosphopentomutase (EC 5.4.2.7)
Locus tag: Shewmr4_1040
Name: deoD
Funciton: Purine nucleoside phosphorylase (EC 2.4.2.1)
deoA-deoB-deoD -85 4.9 TTGTAATATTGCTACAG Shewmr4_1038
Shewanella sp MR-7
Position: -85
Score: 4.94086
Sequence: TTGTAATATTGCTACAG
Locus tag: Shewmr7_1103
Name: deoA
Funciton: Thymidine phosphorylase (EC 2.4.2.4)
Locus tag: Shewmr7_1104
Name: deoB
Funciton: Phosphopentomutase (EC 5.4.2.7)
Locus tag: Shewmr7_1105
Name: deoD
Funciton: Purine nucleoside phosphorylase (EC 2.4.2.1)
deoA-deoB-deoD -85 4.9 TTGTAATATTGCTACAG Shewmr7_1103
Shewanella sp W3-18-1
Position: -86
Score: 4.94086
Sequence: TTGTAATATTGCTACAG
Locus tag: Sputw3181_1190
Name: deoA
Funciton: Thymidine phosphorylase (EC 2.4.2.4)
Locus tag: Sputw3181_1191
Name: deoB
Funciton: Phosphopentomutase (EC 5.4.2.7)
Locus tag: Sputw3181_1192
Name: deoD
Funciton: Purine nucleoside phosphorylase (EC 2.4.2.1)
deoA-deoB-deoD -86 4.9 TTGTAATATTGCTACAG Sputw3181_1190
Shewanella woodyi ATCC 51908
Position: -108
Score: 4.85256
Sequence: ATGTAGTAAATTTACAT
Locus tag: Swoo_3548
Name: deoA
Funciton: Thymidine phosphorylase (EC 2.4.2.4)
Locus tag: Swoo_3547
Name: deoB
Funciton: Phosphopentomutase (EC 5.4.2.7)
Locus tag: Swoo_3546
Name: deoD
Funciton: Purine nucleoside phosphorylase (EC 2.4.2.1)
deoA-deoB-deoD -108 4.9 ATGTAGTAAATTTACAT Swoo_3548
© 2009-2020 RegPrecise