Orthologous regulated operons containing deoB gene
| Regulog: | HexR - Shewanellaceae |
| Regulator type: | Transcription factor |
| Regulator family: | RpiR |
| Regulation mode: | repressor (activator) |
| Biological process: | Central carbohydrate metabolism |
| Effector: | 2-keto-3-deoxy-6-phosphogluconate |
| Phylum: | Proteobacteria/gamma |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Shewanella amazonensis SB2B | ||||
|
Position: -85
Score: 5.03814 Sequence: CTGTAATATTTTTACAG
Locus tag: Sama_0974
Name: deoA Funciton: Thymidine phosphorylase (EC 2.4.2.4)
Locus tag: Sama_0975
Name: deoB Funciton: Phosphopentomutase (EC 5.4.2.7)
Locus tag: Sama_0976
Name: deoD Funciton: Purine nucleoside phosphorylase (EC 2.4.2.1) |
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| deoA-deoB-deoD | -85 | 5 | CTGTAATATTTTTACAG | Sama_0974 |
| Shewanella baltica OS155 | ||||
|
Position: -86
Score: 4.94086 Sequence: TTGTAATATTGCTACAG
Locus tag: Sbal_3226
Name: deoA Funciton: Thymidine phosphorylase (EC 2.4.2.4)
Locus tag: Sbal_3225
Name: deoB Funciton: Phosphopentomutase (EC 5.4.2.7)
Locus tag: Sbal_3224
Name: deoD Funciton: Purine nucleoside phosphorylase (EC 2.4.2.1) |
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| deoA-deoB-deoD | -86 | 4.9 | TTGTAATATTGCTACAG | Sbal_3226 |
| Shewanella halifaxensis HAW-EB4 | ||||
|
Position: -94
Score: 4.52463 Sequence: ATGTAACAATATTACGG
Locus tag: Shal_3135
Name: deoA Funciton: Thymidine phosphorylase (EC 2.4.2.4)
Locus tag: Shal_3134
Name: deoB Funciton: Phosphopentomutase (EC 5.4.2.7)
Locus tag: Shal_3133
Name: deoD Funciton: Purine nucleoside phosphorylase (EC 2.4.2.1) |
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| deoA-deoB-deoD | -94 | 4.5 | ATGTAACAATATTACGG | Shal_3135 |
| Shewanella loihica PV-4 | ||||
|
Position: -85
Score: 4.64184 Sequence: TCGTAATTAAATTACGG
Locus tag: Shew_2814
Name: deoA Funciton: Thymidine phosphorylase (EC 2.4.2.4)
Locus tag: Shew_2813
Name: deoB Funciton: Phosphopentomutase (EC 5.4.2.7)
Locus tag: Shew_2812
Name: deoD Funciton: Purine nucleoside phosphorylase (EC 2.4.2.1) |
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| deoA-deoB-deoD | -85 | 4.6 | TCGTAATTAAATTACGG | Shew_2814 |
| Shewanella oneidensis MR-1 | ||||
|
Position: -85
Score: 4.94086 Sequence: TTGTAATATTGCTACAG
Locus tag: SO_1218
Name: deoA Funciton: Thymidine phosphorylase (EC 2.4.2.4)
Locus tag: SO_1219
Name: deoB Funciton: Phosphopentomutase (EC 5.4.2.7)
Locus tag: SO_1221
Name: deoD Funciton: Purine nucleoside phosphorylase (EC 2.4.2.1) |
||||
| deoA-deoB-deoD | -85 | 4.9 | TTGTAATATTGCTACAG | SO_1218 |
| Shewanella pealeana ATCC 700345 | ||||
|
Position: -94
Score: 4.73079 Sequence: ATGTAACAATATTACGA
Locus tag: Spea_3047
Name: deoA Funciton: Thymidine phosphorylase (EC 2.4.2.4)
Locus tag: Spea_3046
Name: deoB Funciton: Phosphopentomutase (EC 5.4.2.7)
Locus tag: Spea_3045
Name: deoD Funciton: Purine nucleoside phosphorylase (EC 2.4.2.1) |
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| deoA-deoB-deoD | -94 | 4.7 | ATGTAACAATATTACGA | Spea_3047 |
| Shewanella piezotolerans WP3 | ||||
|
Position: -103
Score: 4.03684 Sequence: CCGTTATTATGTAACAA
Position: -95
Score: 4.52463 Sequence: ATGTAACAATATTACGG
Locus tag: swp_1230
Name: deoA Funciton: Thymidine phosphorylase (EC 2.4.2.4)
Locus tag: swp_1231
Name: deoB Funciton: Phosphopentomutase (EC 5.4.2.7)
Locus tag: swp_1232
Name: deoD Funciton: Purine nucleoside phosphorylase (EC 2.4.2.1) |
||||
| deoA-deoB-deoD | -103 | 4 | CCGTTATTATGTAACAA | swp_1230 |
| -95 | 4.5 | ATGTAACAATATTACGG | ||
| Shewanella putrefaciens CN-32 | ||||
|
Position: -86
Score: 4.94086 Sequence: TTGTAATATTGCTACAG
Locus tag: Sputcn32_2821
Name: deoA Funciton: Thymidine phosphorylase (EC 2.4.2.4)
Locus tag: Sputcn32_2820
Name: deoB Funciton: Phosphopentomutase (EC 5.4.2.7)
Locus tag: Sputcn32_2819
Name: deoD Funciton: Purine nucleoside phosphorylase (EC 2.4.2.1) |
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| deoA-deoB-deoD | -86 | 4.9 | TTGTAATATTGCTACAG | Sputcn32_2821 |
| Shewanella sediminis HAW-EB3 | ||||
|
Position: -85
Score: 5.15606 Sequence: TTGTAATTAAATTACGT
Locus tag: Ssed_3377
Name: deoA Funciton: Thymidine phosphorylase (EC 2.4.2.4)
Locus tag: Ssed_3376
Name: deoB Funciton: Phosphopentomutase (EC 5.4.2.7)
Locus tag: Ssed_3375
Name: deoD Funciton: Purine nucleoside phosphorylase (EC 2.4.2.1) |
||||
| deoA-deoB-deoD | -85 | 5.2 | TTGTAATTAAATTACGT | Ssed_3377 |
| Shewanella sp ANA-3 | ||||
|
Position: -85
Score: 4.94086 Sequence: TTGTAATATTGCTACAG
Locus tag: Shewana3_1042
Name: deoA Funciton: Thymidine phosphorylase (EC 2.4.2.4)
Locus tag: Shewana3_1043
Name: deoB Funciton: Phosphopentomutase (EC 5.4.2.7)
Locus tag: Shewana3_1044
Name: deoD Funciton: Purine nucleoside phosphorylase (EC 2.4.2.1) |
||||
| deoA-deoB-deoD | -85 | 4.9 | TTGTAATATTGCTACAG | Shewana3_1042 |
| Shewanella sp MR-4 | ||||
|
Position: -85
Score: 4.94086 Sequence: TTGTAATATTGCTACAG
Locus tag: Shewmr4_1038
Name: deoA Funciton: Thymidine phosphorylase (EC 2.4.2.4)
Locus tag: Shewmr4_1039
Name: deoB Funciton: Phosphopentomutase (EC 5.4.2.7)
Locus tag: Shewmr4_1040
Name: deoD Funciton: Purine nucleoside phosphorylase (EC 2.4.2.1) |
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| deoA-deoB-deoD | -85 | 4.9 | TTGTAATATTGCTACAG | Shewmr4_1038 |
| Shewanella sp MR-7 | ||||
|
Position: -85
Score: 4.94086 Sequence: TTGTAATATTGCTACAG
Locus tag: Shewmr7_1103
Name: deoA Funciton: Thymidine phosphorylase (EC 2.4.2.4)
Locus tag: Shewmr7_1104
Name: deoB Funciton: Phosphopentomutase (EC 5.4.2.7)
Locus tag: Shewmr7_1105
Name: deoD Funciton: Purine nucleoside phosphorylase (EC 2.4.2.1) |
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| deoA-deoB-deoD | -85 | 4.9 | TTGTAATATTGCTACAG | Shewmr7_1103 |
| Shewanella sp W3-18-1 | ||||
|
Position: -86
Score: 4.94086 Sequence: TTGTAATATTGCTACAG
Locus tag: Sputw3181_1190
Name: deoA Funciton: Thymidine phosphorylase (EC 2.4.2.4)
Locus tag: Sputw3181_1191
Name: deoB Funciton: Phosphopentomutase (EC 5.4.2.7)
Locus tag: Sputw3181_1192
Name: deoD Funciton: Purine nucleoside phosphorylase (EC 2.4.2.1) |
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| deoA-deoB-deoD | -86 | 4.9 | TTGTAATATTGCTACAG | Sputw3181_1190 |
| Shewanella woodyi ATCC 51908 | ||||
|
Position: -108
Score: 4.85256 Sequence: ATGTAGTAAATTTACAT
Locus tag: Swoo_3548
Name: deoA Funciton: Thymidine phosphorylase (EC 2.4.2.4)
Locus tag: Swoo_3547
Name: deoB Funciton: Phosphopentomutase (EC 5.4.2.7)
Locus tag: Swoo_3546
Name: deoD Funciton: Purine nucleoside phosphorylase (EC 2.4.2.1) |
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| deoA-deoB-deoD | -108 | 4.9 | ATGTAGTAAATTTACAT | Swoo_3548 |