Orthologous regulated operons containing nqrF gene
| Regulog: | HexR - Shewanellaceae |
| Regulator type: | Transcription factor |
| Regulator family: | RpiR |
| Regulation mode: | repressor (activator) |
| Biological process: | Central carbohydrate metabolism |
| Effector: | 2-keto-3-deoxy-6-phosphogluconate |
| Phylum: | Proteobacteria/gamma |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Shewanella amazonensis SB2B | ||||
|
Position: -180
Score: 4.59211 Sequence: ATGTAACTTTATGACAA
Position: -109
Score: 4.92269 Sequence: TTGTAGTTAAATTTCAT
Locus tag: Sama_2981
Name: nqrA Funciton: NADH:ubiquinone oxidoreductase, Na translocating, alpha subunit
Locus tag: Sama_2980
Name: nqrB Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrB
Locus tag: Sama_2979
Name: nqrC Funciton: NADH:ubiquinone oxidoreductase, Na translocating, gamma subunit
Locus tag: Sama_2978
Name: nqrD Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrD
Locus tag: Sama_2977
Name: nqrE Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrE
Locus tag: Sama_2976
Name: nqrF Funciton: NADH:ubiquinone oxidoreductase, Na translocating, beta subunit |
||||
| nqrA-nqrB-nqrC-nqrD-nqrE-nqrF | -180 | 4.6 | ATGTAACTTTATGACAA | Sama_2981 |
| -109 | 4.9 | TTGTAGTTAAATTTCAT | ||
| Shewanella baltica OS155 | ||||
|
Position: -182
Score: 5.01498 Sequence: TTGTTATAAAACTACAT
Locus tag: Sbal_0754
Name: nqrA Funciton: NADH:ubiquinone oxidoreductase, Na translocating, alpha subunit
Locus tag: Sbal_0755
Name: nqrB Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrB
Locus tag: Sbal_0756
Name: nqrC Funciton: NADH:ubiquinone oxidoreductase, Na translocating, gamma subunit
Locus tag: Sbal_0757
Name: nqrD Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrD
Locus tag: Sbal_0758
Name: nqrE Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrE
Locus tag: Sbal_0759
Name: nqrF Funciton: NADH:ubiquinone oxidoreductase, Na translocating, beta subunit |
||||
| nqrA-nqrB-nqrC-nqrD-nqrE-nqrF | -182 | 5 | TTGTTATAAAACTACAT | Sbal_0754 |
| Shewanella frigidimarina NCIMB 400 | ||||
|
Position: -67
Score: 4.03364 Sequence: TAGTTACTATATTAGTA
Locus tag: Sfri_3211
Name: nqrA Funciton: NADH:ubiquinone oxidoreductase, Na translocating, alpha subunit
Locus tag: Sfri_3210
Name: nqrB Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrB
Locus tag: Sfri_3209
Name: nqrC Funciton: NADH:ubiquinone oxidoreductase, Na translocating, gamma subunit
Locus tag: Sfri_3208
Name: nqrD Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrD
Locus tag: Sfri_3207
Name: nqrE Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrE
Locus tag: Sfri_3206
Name: nqrF Funciton: NADH:ubiquinone oxidoreductase, Na translocating, beta subunit |
||||
| nqrA-nqrB-nqrC-nqrD-nqrE-nqrF | -67 | 4 | TAGTTACTATATTAGTA | Sfri_3211 |
| Shewanella halifaxensis HAW-EB4 | ||||
|
Position: -108
Score: 4.35071 Sequence: TTGTTGGTAACTTACAA
Locus tag: Shal_1644
Name: nqrA Funciton: NADH:ubiquinone oxidoreductase, Na translocating, alpha subunit
Locus tag: Shal_1645
Name: nqrB Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrB
Locus tag: Shal_1646
Name: nqrC Funciton: NADH:ubiquinone oxidoreductase, Na translocating, gamma subunit
Locus tag: Shal_1647
Name: nqrD Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrD
Locus tag: Shal_1648
Name: nqrE Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrE
Locus tag: Shal_1649
Name: nqrF Funciton: NADH:ubiquinone oxidoreductase, Na translocating, beta subunit
Locus tag: Shal_1650
Name: null Funciton: hypothetical protein |
||||
| nqrA-nqrB-nqrC-nqrD-nqrE-nqrF-Shal_1650 | -108 | 4.4 | TTGTTGGTAACTTACAA | Shal_1644 |
| Shewanella loihica PV-4 | ||||
|
Position: -171
Score: 5.01498 Sequence: TTGTTATAAAACTACAT
Position: -99
Score: 4.61935 Sequence: CTGTAGCTAAGTTACAA
Locus tag: Shew_2709
Name: nqrA Funciton: NADH:ubiquinone oxidoreductase, Na translocating, alpha subunit
Locus tag: Shew_2708
Name: nqrB Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrB
Locus tag: Shew_2707
Name: nqrC Funciton: NADH:ubiquinone oxidoreductase, Na translocating, gamma subunit
Locus tag: Shew_2706
Name: nqrD Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrD
Locus tag: Shew_2705
Name: nqrE Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrE
Locus tag: Shew_2704
Name: nqrF Funciton: NADH:ubiquinone oxidoreductase, Na translocating, beta subunit |
||||
| nqrA-nqrB-nqrC-nqrD-nqrE-nqrF | -171 | 5 | TTGTTATAAAACTACAT | Shew_2709 |
| -99 | 4.6 | CTGTAGCTAAGTTACAA | ||
| Shewanella oneidensis MR-1 | ||||
|
Position: -181
Score: 5.01498 Sequence: TTGTTATAAAACTACAT
Locus tag: SO_0902
Name: nqrA Funciton: NADH:ubiquinone oxidoreductase, Na translocating, alpha subunit
Locus tag: SO_0903
Name: nqrB Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrB
Locus tag: SO_0904
Name: nqrC Funciton: NADH:ubiquinone oxidoreductase, Na translocating, gamma subunit
Locus tag: SO_0905
Name: nqrD Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrD
Locus tag: SO_0906
Name: nqrE Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrE
Locus tag: SO_0907
Name: nqrF Funciton: NADH:ubiquinone oxidoreductase, Na translocating, beta subunit |
||||
| nqrA-nqrB-nqrC-nqrD-nqrE-nqrF | -181 | 5 | TTGTTATAAAACTACAT | SO_0902 |
| Shewanella pealeana ATCC 700345 | ||||
|
Position: -108
Score: 4.69907 Sequence: TTGTAGGTAACTTACAA
Locus tag: Spea_1573
Name: nqrA Funciton: NADH:ubiquinone oxidoreductase, Na translocating, alpha subunit
Locus tag: Spea_1574
Name: nqrB Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrB
Locus tag: Spea_1575
Name: nqrC Funciton: NADH:ubiquinone oxidoreductase, Na translocating, gamma subunit
Locus tag: Spea_1576
Name: nqrD Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrD
Locus tag: Spea_1577
Name: nqrE Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrE
Locus tag: Spea_1578
Name: nqrF Funciton: NADH:ubiquinone oxidoreductase, Na translocating, beta subunit |
||||
| nqrA-nqrB-nqrC-nqrD-nqrE-nqrF | -108 | 4.7 | TTGTAGGTAACTTACAA | Spea_1573 |
| Shewanella piezotolerans WP3 | ||||
|
Position: -178
Score: 4.52392 Sequence: TCGTTGTAAAATTACAT
Position: -96
Score: 4.37701 Sequence: TTGTATGTAAGTTACAA
Locus tag: swp_2889
Name: nqrA Funciton: NADH:ubiquinone oxidoreductase, Na translocating, alpha subunit
Locus tag: swp_2888
Name: nqrB Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrB
Locus tag: swp_2887
Name: null Funciton: hypothetical protein swp_2887
Locus tag: swp_2886
Name: nqrC Funciton: NADH:ubiquinone oxidoreductase, Na translocating, gamma subunit
Locus tag: swp_2885
Name: nqrD Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrD
Locus tag: swp_2884
Name: nqrE Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrE
Locus tag: swp_2883
Name: nqrF Funciton: NADH:ubiquinone oxidoreductase, Na translocating, beta subunit |
||||
| nqrA-nqrB-swp_2887-nqrC-nqrD-nqrE-nqrF | -178 | 4.5 | TCGTTGTAAAATTACAT | swp_2889 |
| -96 | 4.4 | TTGTATGTAAGTTACAA | ||
| Shewanella putrefaciens CN-32 | ||||
|
Position: -182
Score: 5.01498 Sequence: TTGTTATAAAACTACAT
Locus tag: Sputcn32_0849
Name: nqrA Funciton: NADH:ubiquinone oxidoreductase, Na translocating, alpha subunit
Locus tag: Sputcn32_0850
Name: nqrB Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrB
Locus tag: Sputcn32_0851
Name: nqrC Funciton: NADH:ubiquinone oxidoreductase, Na translocating, gamma subunit
Locus tag: Sputcn32_0852
Name: nqrD Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrD
Locus tag: Sputcn32_0853
Name: nqrE Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrE
Locus tag: Sputcn32_0854
Name: nqrF Funciton: NADH:ubiquinone oxidoreductase, Na translocating, beta subunit |
||||
| nqrA-nqrB-nqrC-nqrD-nqrE-nqrF | -182 | 5 | TTGTTATAAAACTACAT | Sputcn32_0849 |
| Shewanella sediminis HAW-EB3 | ||||
|
Position: -178
Score: 5.01498 Sequence: TTGTTATAAAACTACAT
Position: -106
Score: 4.55198 Sequence: ATGTTACTAAGTTACAA
Locus tag: Ssed_3582
Name: nqrA Funciton: NADH:ubiquinone oxidoreductase, Na translocating, alpha subunit
Locus tag: Ssed_3581
Name: nqrB Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrB
Locus tag: Ssed_3580
Name: nqrC Funciton: NADH:ubiquinone oxidoreductase, Na translocating, gamma subunit
Locus tag: Ssed_3579
Name: nqrD Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrD
Locus tag: Ssed_3578
Name: nqrE Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrE
Locus tag: Ssed_3577
Name: nqrF Funciton: NADH:ubiquinone oxidoreductase, Na translocating, beta subunit |
||||
| nqrA-nqrB-nqrC-nqrD-nqrE-nqrF | -178 | 5 | TTGTTATAAAACTACAT | Ssed_3582 |
| -106 | 4.6 | ATGTTACTAAGTTACAA | ||
| Shewanella sp ANA-3 | ||||
|
Position: -181
Score: 5.01498 Sequence: TTGTTATAAAACTACAT
Locus tag: Shewana3_3378
Name: nqrA Funciton: NADH:ubiquinone oxidoreductase, Na translocating, alpha subunit
Locus tag: Shewana3_3377
Name: nqrB Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrB
Locus tag: Shewana3_3376
Name: nqrC Funciton: NADH:ubiquinone oxidoreductase, Na translocating, gamma subunit
Locus tag: Shewana3_3375
Name: nqrD Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrD
Locus tag: Shewana3_3374
Name: nqrE Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrE
Locus tag: Shewana3_3373
Name: nqrF Funciton: NADH:ubiquinone oxidoreductase, Na translocating, beta subunit |
||||
| nqrA-nqrB-nqrC-nqrD-nqrE-nqrF | -181 | 5 | TTGTTATAAAACTACAT | Shewana3_3378 |
| Shewanella sp MR-4 | ||||
|
Position: -181
Score: 5.01498 Sequence: TTGTTATAAAACTACAT
Locus tag: Shewmr4_0748
Name: nqrA Funciton: NADH:ubiquinone oxidoreductase, Na translocating, alpha subunit
Locus tag: Shewmr4_0749
Name: nqrB Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrB
Locus tag: Shewmr4_0750
Name: nqrC Funciton: NADH:ubiquinone oxidoreductase, Na translocating, gamma subunit
Locus tag: Shewmr4_0751
Name: nqrD Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrD
Locus tag: Shewmr4_0752
Name: nqrE Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrE
Locus tag: Shewmr4_0753
Name: nqrF Funciton: NADH:ubiquinone oxidoreductase, Na translocating, beta subunit |
||||
| nqrA-nqrB-nqrC-nqrD-nqrE-nqrF | -181 | 5 | TTGTTATAAAACTACAT | Shewmr4_0748 |
| Shewanella sp MR-7 | ||||
|
Position: -181
Score: 5.01498 Sequence: TTGTTATAAAACTACAT
Locus tag: Shewmr7_3272
Name: nqrA Funciton: NADH:ubiquinone oxidoreductase, Na translocating, alpha subunit
Locus tag: Shewmr7_3271
Name: nqrB Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrB
Locus tag: Shewmr7_3270
Name: nqrC Funciton: NADH:ubiquinone oxidoreductase, Na translocating, gamma subunit
Locus tag: Shewmr7_3269
Name: nqrD Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrD
Locus tag: Shewmr7_3268
Name: nqrE Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrE
Locus tag: Shewmr7_3267
Name: nqrF Funciton: NADH:ubiquinone oxidoreductase, Na translocating, beta subunit |
||||
| nqrA-nqrB-nqrC-nqrD-nqrE-nqrF | -181 | 5 | TTGTTATAAAACTACAT | Shewmr7_3272 |
| Shewanella sp W3-18-1 | ||||
|
Position: -182
Score: 5.01498 Sequence: TTGTTATAAAACTACAT
Locus tag: Sputw3181_3324
Name: nqrA Funciton: NADH:ubiquinone oxidoreductase, Na translocating, alpha subunit
Locus tag: Sputw3181_3323
Name: nqrB Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrB
Locus tag: Sputw3181_3322
Name: nqrC Funciton: NADH:ubiquinone oxidoreductase, Na translocating, gamma subunit
Locus tag: Sputw3181_3321
Name: nqrD Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrD
Locus tag: Sputw3181_3320
Name: nqrE Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrE
Locus tag: Sputw3181_3319
Name: nqrF Funciton: NADH:ubiquinone oxidoreductase, Na translocating, beta subunit |
||||
| nqrA-nqrB-nqrC-nqrD-nqrE-nqrF | -182 | 5 | TTGTTATAAAACTACAT | Sputw3181_3324 |