Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing nqrF gene

Properties
Regulog: HexR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: RpiR
Regulation mode: repressor (activator)
Biological process: Central carbohydrate metabolism
Effector: 2-keto-3-deoxy-6-phosphogluconate
Phylum: Proteobacteria/gamma
Built upon 316 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -180
Score: 4.59211
Sequence: ATGTAACTTTATGACAA
Position: -109
Score: 4.92269
Sequence: TTGTAGTTAAATTTCAT
Locus tag: Sama_2981
Name: nqrA
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, alpha subunit
Locus tag: Sama_2980
Name: nqrB
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrB
Locus tag: Sama_2979
Name: nqrC
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, gamma subunit
Locus tag: Sama_2978
Name: nqrD
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrD
Locus tag: Sama_2977
Name: nqrE
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrE
Locus tag: Sama_2976
Name: nqrF
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, beta subunit
nqrA-nqrB-nqrC-nqrD-nqrE-nqrF -180 4.6 ATGTAACTTTATGACAA Sama_2981
-109 4.9 TTGTAGTTAAATTTCAT
Shewanella baltica OS155
Position: -182
Score: 5.01498
Sequence: TTGTTATAAAACTACAT
Locus tag: Sbal_0754
Name: nqrA
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, alpha subunit
Locus tag: Sbal_0755
Name: nqrB
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrB
Locus tag: Sbal_0756
Name: nqrC
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, gamma subunit
Locus tag: Sbal_0757
Name: nqrD
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrD
Locus tag: Sbal_0758
Name: nqrE
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrE
Locus tag: Sbal_0759
Name: nqrF
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, beta subunit
nqrA-nqrB-nqrC-nqrD-nqrE-nqrF -182 5 TTGTTATAAAACTACAT Sbal_0754
Shewanella frigidimarina NCIMB 400
Position: -67
Score: 4.03364
Sequence: TAGTTACTATATTAGTA
Locus tag: Sfri_3211
Name: nqrA
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, alpha subunit
Locus tag: Sfri_3210
Name: nqrB
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrB
Locus tag: Sfri_3209
Name: nqrC
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, gamma subunit
Locus tag: Sfri_3208
Name: nqrD
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrD
Locus tag: Sfri_3207
Name: nqrE
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrE
Locus tag: Sfri_3206
Name: nqrF
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, beta subunit
nqrA-nqrB-nqrC-nqrD-nqrE-nqrF -67 4 TAGTTACTATATTAGTA Sfri_3211
Shewanella halifaxensis HAW-EB4
Position: -108
Score: 4.35071
Sequence: TTGTTGGTAACTTACAA
Locus tag: Shal_1644
Name: nqrA
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, alpha subunit
Locus tag: Shal_1645
Name: nqrB
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrB
Locus tag: Shal_1646
Name: nqrC
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, gamma subunit
Locus tag: Shal_1647
Name: nqrD
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrD
Locus tag: Shal_1648
Name: nqrE
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrE
Locus tag: Shal_1649
Name: nqrF
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, beta subunit
Locus tag: Shal_1650
Name: null
Funciton: hypothetical protein
nqrA-nqrB-nqrC-nqrD-nqrE-nqrF-Shal_1650 -108 4.4 TTGTTGGTAACTTACAA Shal_1644
Shewanella loihica PV-4
Position: -171
Score: 5.01498
Sequence: TTGTTATAAAACTACAT
Position: -99
Score: 4.61935
Sequence: CTGTAGCTAAGTTACAA
Locus tag: Shew_2709
Name: nqrA
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, alpha subunit
Locus tag: Shew_2708
Name: nqrB
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrB
Locus tag: Shew_2707
Name: nqrC
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, gamma subunit
Locus tag: Shew_2706
Name: nqrD
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrD
Locus tag: Shew_2705
Name: nqrE
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrE
Locus tag: Shew_2704
Name: nqrF
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, beta subunit
nqrA-nqrB-nqrC-nqrD-nqrE-nqrF -171 5 TTGTTATAAAACTACAT Shew_2709
-99 4.6 CTGTAGCTAAGTTACAA
Shewanella oneidensis MR-1
Position: -181
Score: 5.01498
Sequence: TTGTTATAAAACTACAT
Locus tag: SO_0902
Name: nqrA
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, alpha subunit
Locus tag: SO_0903
Name: nqrB
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrB
Locus tag: SO_0904
Name: nqrC
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, gamma subunit
Locus tag: SO_0905
Name: nqrD
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrD
Locus tag: SO_0906
Name: nqrE
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrE
Locus tag: SO_0907
Name: nqrF
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, beta subunit
nqrA-nqrB-nqrC-nqrD-nqrE-nqrF -181 5 TTGTTATAAAACTACAT SO_0902
Shewanella pealeana ATCC 700345
Position: -108
Score: 4.69907
Sequence: TTGTAGGTAACTTACAA
Locus tag: Spea_1573
Name: nqrA
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, alpha subunit
Locus tag: Spea_1574
Name: nqrB
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrB
Locus tag: Spea_1575
Name: nqrC
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, gamma subunit
Locus tag: Spea_1576
Name: nqrD
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrD
Locus tag: Spea_1577
Name: nqrE
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrE
Locus tag: Spea_1578
Name: nqrF
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, beta subunit
nqrA-nqrB-nqrC-nqrD-nqrE-nqrF -108 4.7 TTGTAGGTAACTTACAA Spea_1573
Shewanella piezotolerans WP3
Position: -178
Score: 4.52392
Sequence: TCGTTGTAAAATTACAT
Position: -96
Score: 4.37701
Sequence: TTGTATGTAAGTTACAA
Locus tag: swp_2889
Name: nqrA
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, alpha subunit
Locus tag: swp_2888
Name: nqrB
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrB
Locus tag: swp_2887
Name: null
Funciton: hypothetical protein swp_2887
Locus tag: swp_2886
Name: nqrC
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, gamma subunit
Locus tag: swp_2885
Name: nqrD
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrD
Locus tag: swp_2884
Name: nqrE
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrE
Locus tag: swp_2883
Name: nqrF
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, beta subunit
nqrA-nqrB-swp_2887-nqrC-nqrD-nqrE-nqrF -178 4.5 TCGTTGTAAAATTACAT swp_2889
-96 4.4 TTGTATGTAAGTTACAA
Shewanella putrefaciens CN-32
Position: -182
Score: 5.01498
Sequence: TTGTTATAAAACTACAT
Locus tag: Sputcn32_0849
Name: nqrA
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, alpha subunit
Locus tag: Sputcn32_0850
Name: nqrB
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrB
Locus tag: Sputcn32_0851
Name: nqrC
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, gamma subunit
Locus tag: Sputcn32_0852
Name: nqrD
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrD
Locus tag: Sputcn32_0853
Name: nqrE
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrE
Locus tag: Sputcn32_0854
Name: nqrF
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, beta subunit
nqrA-nqrB-nqrC-nqrD-nqrE-nqrF -182 5 TTGTTATAAAACTACAT Sputcn32_0849
Shewanella sediminis HAW-EB3
Position: -178
Score: 5.01498
Sequence: TTGTTATAAAACTACAT
Position: -106
Score: 4.55198
Sequence: ATGTTACTAAGTTACAA
Locus tag: Ssed_3582
Name: nqrA
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, alpha subunit
Locus tag: Ssed_3581
Name: nqrB
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrB
Locus tag: Ssed_3580
Name: nqrC
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, gamma subunit
Locus tag: Ssed_3579
Name: nqrD
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrD
Locus tag: Ssed_3578
Name: nqrE
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrE
Locus tag: Ssed_3577
Name: nqrF
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, beta subunit
nqrA-nqrB-nqrC-nqrD-nqrE-nqrF -178 5 TTGTTATAAAACTACAT Ssed_3582
-106 4.6 ATGTTACTAAGTTACAA
Shewanella sp ANA-3
Position: -181
Score: 5.01498
Sequence: TTGTTATAAAACTACAT
Locus tag: Shewana3_3378
Name: nqrA
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, alpha subunit
Locus tag: Shewana3_3377
Name: nqrB
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrB
Locus tag: Shewana3_3376
Name: nqrC
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, gamma subunit
Locus tag: Shewana3_3375
Name: nqrD
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrD
Locus tag: Shewana3_3374
Name: nqrE
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrE
Locus tag: Shewana3_3373
Name: nqrF
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, beta subunit
nqrA-nqrB-nqrC-nqrD-nqrE-nqrF -181 5 TTGTTATAAAACTACAT Shewana3_3378
Shewanella sp MR-4
Position: -181
Score: 5.01498
Sequence: TTGTTATAAAACTACAT
Locus tag: Shewmr4_0748
Name: nqrA
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, alpha subunit
Locus tag: Shewmr4_0749
Name: nqrB
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrB
Locus tag: Shewmr4_0750
Name: nqrC
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, gamma subunit
Locus tag: Shewmr4_0751
Name: nqrD
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrD
Locus tag: Shewmr4_0752
Name: nqrE
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrE
Locus tag: Shewmr4_0753
Name: nqrF
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, beta subunit
nqrA-nqrB-nqrC-nqrD-nqrE-nqrF -181 5 TTGTTATAAAACTACAT Shewmr4_0748
Shewanella sp MR-7
Position: -181
Score: 5.01498
Sequence: TTGTTATAAAACTACAT
Locus tag: Shewmr7_3272
Name: nqrA
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, alpha subunit
Locus tag: Shewmr7_3271
Name: nqrB
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrB
Locus tag: Shewmr7_3270
Name: nqrC
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, gamma subunit
Locus tag: Shewmr7_3269
Name: nqrD
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrD
Locus tag: Shewmr7_3268
Name: nqrE
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrE
Locus tag: Shewmr7_3267
Name: nqrF
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, beta subunit
nqrA-nqrB-nqrC-nqrD-nqrE-nqrF -181 5 TTGTTATAAAACTACAT Shewmr7_3272
Shewanella sp W3-18-1
Position: -182
Score: 5.01498
Sequence: TTGTTATAAAACTACAT
Locus tag: Sputw3181_3324
Name: nqrA
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, alpha subunit
Locus tag: Sputw3181_3323
Name: nqrB
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrB
Locus tag: Sputw3181_3322
Name: nqrC
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, gamma subunit
Locus tag: Sputw3181_3321
Name: nqrD
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrD
Locus tag: Sputw3181_3320
Name: nqrE
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrE
Locus tag: Sputw3181_3319
Name: nqrF
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, beta subunit
nqrA-nqrB-nqrC-nqrD-nqrE-nqrF -182 5 TTGTTATAAAACTACAT Sputw3181_3324
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