Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing gcvH gene

Properties
Regulog: HexR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: RpiR
Regulation mode: repressor (activator)
Biological process: Central carbohydrate metabolism
Effector: 2-keto-3-deoxy-6-phosphogluconate
Phylum: Proteobacteria/gamma
Built upon 316 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella baltica OS155
Position: -372
Score: 5.1104
Sequence: ATGTAAAAAAATTACAT
Locus tag: Sbal_0617
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: Sbal_0618
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: Sbal_0619
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
gcvT-gcvH-gcvP -372 5.1 ATGTAAAAAAATTACAT Sbal_0617
Shewanella frigidimarina NCIMB 400
Position: -154
Score: 5.2934
Sequence: ATGTAAAAAAATTACAA
Locus tag: Sfri_3151
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: Sfri_3150
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: Sfri_3149
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
gcvT-gcvH-gcvP -154 5.3 ATGTAAAAAAATTACAA Sfri_3151
Shewanella halifaxensis HAW-EB4
Position: -237
Score: 4.21006
Sequence: ATGTAAAAAGTTTACAT
Locus tag: Shal_3375
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: Shal_3374
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: Shal_3373
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
gcvT-gcvH-gcvP -237 4.2 ATGTAAAAAGTTTACAT Shal_3375
Shewanella loihica PV-4
Position: -395
Score: 4.85256
Sequence: ATGTAAAAAAACTACAT
Locus tag: Shew_3064
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: Shew_3063
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: Shew_3062
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
gcvT-gcvH-gcvP -395 4.9 ATGTAAAAAAACTACAT Shew_3064
Shewanella oneidensis MR-1
Position: -320
Score: 5.1104
Sequence: ATGTAAAAAAATTACAT
Locus tag: SO_0779
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: SO_0780
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: SO_0781
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
gcvT-gcvH-gcvP -320 5.1 ATGTAAAAAAATTACAT SO_0779
Shewanella piezotolerans WP3
Position: -187
Score: 4.92639
Sequence: GTGTAAATAAATTACAT
Position: -48
Score: 4.45876
Sequence: GTCTTATAATATTACAG
Locus tag: swp_0913
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: swp_0914
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: swp_0915
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
gcvT-gcvH-gcvP -187 4.9 GTGTAAATAAATTACAT swp_0913
-48 4.5 GTCTTATAATATTACAG
Shewanella putrefaciens CN-32
Position: -176
Score: 5.1104
Sequence: ATGTAAAAAAATTACAT
Locus tag: Sputcn32_3211
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: Sputcn32_3210
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: Sputcn32_3209
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
gcvT-gcvH-gcvP -176 5.1 ATGTAAAAAAATTACAT Sputcn32_3211
Shewanella sediminis HAW-EB3
Position: -237
Score: 4.85256
Sequence: ATGTAAAAAAACTACAT
Locus tag: Ssed_3675
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: Ssed_3674
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: Ssed_3673
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
gcvT-gcvH-gcvP -237 4.9 ATGTAAAAAAACTACAT Ssed_3675
Shewanella sp ANA-3
Position: -320
Score: 5.1104
Sequence: ATGTAAAAAAATTACAT
Locus tag: Shewana3_3501
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: Shewana3_3500
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: Shewana3_3499
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
gcvT-gcvH-gcvP -320 5.1 ATGTAAAAAAATTACAT Shewana3_3501
Shewanella sp MR-4
Position: -322
Score: 5.1104
Sequence: ATGTAAAAAAATTACAT
Locus tag: Shewmr4_3331
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: Shewmr4_3330
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: Shewmr4_3329
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
gcvT-gcvH-gcvP -322 5.1 ATGTAAAAAAATTACAT Shewmr4_3331
Shewanella sp MR-7
Position: -321
Score: 5.1104
Sequence: ATGTAAAAAAATTACAT
Locus tag: Shewmr7_0622
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: Shewmr7_0623
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: Shewmr7_0624
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
gcvT-gcvH-gcvP -321 5.1 ATGTAAAAAAATTACAT Shewmr7_0622
Shewanella sp W3-18-1
Position: -176
Score: 5.1104
Sequence: ATGTAAAAAAATTACAT
Locus tag: Sputw3181_0730
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: Sputw3181_0731
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: Sputw3181_0732
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
gcvT-gcvH-gcvP -176 5.1 ATGTAAAAAAATTACAT Sputw3181_0730
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