Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing ipdC gene

Properties
Regulog: TyrR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: TyrR
Regulation mode: activator
Biological process: Amino acid utilization
Effector: Tyrosine; Phenylalanine
Phylum: Proteobacteria/gamma
Built upon 312 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -203
Score: 3.94593
Sequence: ACGTAAGCCAGGCTTTCCAA
Position: -138
Score: 3.79663
Sequence: GTGTCACGCCCGGATGACAG
Locus tag: Sama_1025
Name: ipdC
Funciton: Indole-3-pyruvate decarboxylase (EC 4.1.1.74)
ipdC -203 3.9 ACGTAAGCCAGGCTTTCCAA Sama_1025
-138 3.8 GTGTCACGCCCGGATGACAG
Shewanella denitrificans OS217
Position: -181
Score: 4.20288
Sequence: TTGTATACAAAATATGACAA
Locus tag: Sden_1376
Name: ipdC
Funciton: Indole-3-pyruvate decarboxylase (EC 4.1.1.74)
ipdC -181 4.2 TTGTATACAAAATATGACAA Sden_1376
Shewanella loihica PV-4
Position: -134
Score: 4.13245
Sequence: CTGTAACGATATCTTGTCAC
Locus tag: Shew_3635
Name: ipdC
Funciton: Indole-3-pyruvate decarboxylase (EC 4.1.1.74)
ipdC -134 4.1 CTGTAACGATATCTTGTCAC Shew_3635
Shewanella sediminis HAW-EB3
Position: -211
Score: 4.35531
Sequence: GTGTAAAGCCGGGTCTACAC
Position: -137
Score: 4.24601
Sequence: ATGTAAAGTTAACTGTACGT
Locus tag: Ssed_0171
Name: ipdC
Funciton: Indole-3-pyruvate decarboxylase (EC 4.1.1.74)
ipdC -211 4.4 GTGTAAAGCCGGGTCTACAC Ssed_0171
-137 4.2 ATGTAAAGTTAACTGTACGT
© 2009-2020 RegPrecise