Orthologous regulated operons containing hmgB gene
Regulog: | TyrR - Shewanellaceae |
Regulator type: | Transcription factor |
Regulator family: | TyrR |
Regulation mode: | activator |
Biological process: | Amino acid utilization |
Effector: | Tyrosine; Phenylalanine |
Phylum: | Proteobacteria/gamma |
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Operon | Position | Score | Sequence | Locus Tag of the First Gene |
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Shewanella amazonensis SB2B | ||||
Position: -234
Score: 4.29557 Sequence: GTGTAAAAAGAATTTGCCAG
Position: -150
Score: 4.41982 Sequence: CTGTATTTAAAAGTTTACAA
Locus tag: Sama_2219
Name: hmgC Funciton: Fumarylacetoacetase (EC 3.7.1.2)
Locus tag: Sama_2218
Name: hmgB Funciton: Maleylacetoacetate isomerase (EC 5.2.1.2) |
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hmgC-hmgB | -234 | 4.3 | GTGTAAAAAGAATTTGCCAG | Sama_2219 |
-150 | 4.4 | CTGTATTTAAAAGTTTACAA | ||
Shewanella baltica OS155 | ||||
Position: -358
Score: 3.8297 Sequence: ATGTAACAGTATCGTTCCAC
Position: -274
Score: 4.02177 Sequence: ACGTAATGATTAGTTTACGA
Locus tag: Sbal_1487
Name: hmgC Funciton: Fumarylacetoacetase (EC 3.7.1.2)
Locus tag: Sbal_1488
Name: hmgB Funciton: Maleylacetoacetate isomerase (EC 5.2.1.2) |
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hmgC-hmgB | -358 | 3.8 | ATGTAACAGTATCGTTCCAC | Sbal_1487 |
-274 | 4 | ACGTAATGATTAGTTTACGA | ||
Shewanella denitrificans OS217 | ||||
Position: -228
Score: 4.11952 Sequence: ATGTAACGAATTAGTGCCAT
Position: -146
Score: 4.06206 Sequence: TTGTACTGAAAAGTTTACAG
Locus tag: Sden_2592
Name: hmgC Funciton: Fumarylacetoacetase (EC 3.7.1.2)
Locus tag: Sden_2591
Name: hmgB Funciton: Maleylacetoacetate isomerase (EC 5.2.1.2) |
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hmgC-hmgB | -228 | 4.1 | ATGTAACGAATTAGTGCCAT | Sden_2592 |
-146 | 4.1 | TTGTACTGAAAAGTTTACAG | ||
Shewanella frigidimarina NCIMB 400 | ||||
Position: -155
Score: 4.85232 Sequence: TTGTAACGAATAATTTACAA
Locus tag: Sfri_1331
Name: hmgC Funciton: Fumarylacetoacetase (EC 3.7.1.2)
Locus tag: Sfri_1332
Name: hmgB Funciton: Maleylacetoacetate isomerase (EC 5.2.1.2) |
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hmgC-hmgB | -155 | 4.9 | TTGTAACGAATAATTTACAA | Sfri_1331 |
Shewanella halifaxensis HAW-EB4 | ||||
Position: -183
Score: 4.66123 Sequence: CTGTAAGTATAAGTTTACAA
Locus tag: Shal_1534
Name: hmgC Funciton: Fumarylacetoacetase (EC 3.7.1.2)
Locus tag: Shal_1535
Name: hmgB Funciton: Maleylacetoacetate isomerase (EC 5.2.1.2) |
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hmgC-hmgB | -183 | 4.7 | CTGTAAGTATAAGTTTACAA | Shal_1534 |
Shewanella loihica PV-4 | ||||
Position: -169
Score: 4.49333 Sequence: CTGTCATGAATTGTTTACAA
Locus tag: Shew_1438
Name: hmgC Funciton: Fumarylacetoacetase (EC 3.7.1.2)
Locus tag: Shew_1439
Name: hmgB Funciton: Maleylacetoacetate isomerase (EC 5.2.1.2) |
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hmgC-hmgB | -169 | 4.5 | CTGTCATGAATTGTTTACAA | Shew_1438 |
Shewanella oneidensis MR-1 | ||||
Position: -323
Score: 3.8297 Sequence: ATGTAACAGTATCGTTCCAC
Position: -239
Score: 4.32352 Sequence: ACGTAATGATTAGTTTACAG
Locus tag: SO_1670
Name: hmgC Funciton: Fumarylacetoacetase (EC 3.7.1.2)
Locus tag: SO_1671
Name: hmgB Funciton: Maleylacetoacetate isomerase (EC 5.2.1.2) |
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hmgC-hmgB | -323 | 3.8 | ATGTAACAGTATCGTTCCAC | SO_1670 |
-239 | 4.3 | ACGTAATGATTAGTTTACAG | ||
Shewanella pealeana ATCC 700345 | ||||
Position: -197
Score: 4.78048 Sequence: GTGTATCTATAAGTTTACAC
Locus tag: Spea_1451
Name: hmgC Funciton: Fumarylacetoacetase (EC 3.7.1.2)
Locus tag: Spea_1452
Name: hmgB Funciton: Maleylacetoacetate isomerase (EC 5.2.1.2) |
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hmgC-hmgB | -197 | 4.8 | GTGTATCTATAAGTTTACAC | Spea_1451 |
Shewanella piezotolerans WP3 | ||||
Position: -179
Score: 4.76526 Sequence: CTGTAATTATATGTTTACAA
Locus tag: swp_1653
Name: hmgC Funciton: Fumarylacetoacetase (EC 3.7.1.2)
Locus tag: swp_1654
Name: hmgB Funciton: Maleylacetoacetate isomerase (EC 5.2.1.2) |
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hmgC-hmgB | -179 | 4.8 | CTGTAATTATATGTTTACAA | swp_1653 |
Shewanella putrefaciens CN-32 | ||||
Position: -352
Score: 3.94524 Sequence: ATGTAACCGTATCGTTCCAC
Position: -268
Score: 4.02177 Sequence: ACGTAATGATTAGTTTACGA
Locus tag: Sputcn32_1389
Name: hmgC Funciton: Fumarylacetoacetase (EC 3.7.1.2)
Locus tag: Sputcn32_1390
Name: hmgB Funciton: Maleylacetoacetate isomerase (EC 5.2.1.2) |
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hmgC-hmgB | -352 | 3.9 | ATGTAACCGTATCGTTCCAC | Sputcn32_1389 |
-268 | 4 | ACGTAATGATTAGTTTACGA | ||
Shewanella sediminis HAW-EB3 | ||||
Position: -238
Score: 3.99554 Sequence: ATGTAAAAGCTTGTTGCCAC
Position: -155
Score: 4.04389 Sequence: GTGTAACTGTTTATTTACGT
Locus tag: Ssed_2927
Name: hmgC Funciton: Fumarylacetoacetase (EC 3.7.1.2)
Locus tag: Ssed_2926
Name: hmgB Funciton: Maleylacetoacetate isomerase (EC 5.2.1.2) |
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hmgC-hmgB | -238 | 4 | ATGTAAAAGCTTGTTGCCAC | Ssed_2927 |
-155 | 4 | GTGTAACTGTTTATTTACGT | ||
Shewanella sp ANA-3 | ||||
Position: -320
Score: 3.8297 Sequence: ATGTAACAGTATCGTTCCAC
Position: -236
Score: 4.43937 Sequence: ACGTAATGATTAGTTTACAA
Locus tag: Shewana3_2778
Name: hmgC Funciton: Fumarylacetoacetase (EC 3.7.1.2)
Locus tag: Shewana3_2777
Name: hmgB Funciton: Maleylacetoacetate isomerase (EC 5.2.1.2) |
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hmgC-hmgB | -320 | 3.8 | ATGTAACAGTATCGTTCCAC | Shewana3_2778 |
-236 | 4.4 | ACGTAATGATTAGTTTACAA | ||
Shewanella sp MR-4 | ||||
Position: -319
Score: 3.8297 Sequence: ATGTAACAGTATCGTTCCAC
Position: -235
Score: 4.43937 Sequence: ACGTAATGATTAGTTTACAA
Locus tag: Shewmr4_2604
Name: hmgC Funciton: Fumarylacetoacetase (EC 3.7.1.2)
Locus tag: Shewmr4_2603
Name: hmgB Funciton: Maleylacetoacetate isomerase (EC 5.2.1.2) |
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hmgC-hmgB | -319 | 3.8 | ATGTAACAGTATCGTTCCAC | Shewmr4_2604 |
-235 | 4.4 | ACGTAATGATTAGTTTACAA | ||
Shewanella sp MR-7 | ||||
Position: -319
Score: 3.8297 Sequence: ATGTAACAGTATCGTTCCAC
Position: -235
Score: 4.43937 Sequence: ACGTAATGATTAGTTTACAA
Locus tag: Shewmr7_2671
Name: hmgC Funciton: Fumarylacetoacetase (EC 3.7.1.2)
Locus tag: Shewmr7_2670
Name: hmgB Funciton: Maleylacetoacetate isomerase (EC 5.2.1.2) |
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hmgC-hmgB | -319 | 3.8 | ATGTAACAGTATCGTTCCAC | Shewmr7_2671 |
-235 | 4.4 | ACGTAATGATTAGTTTACAA | ||
Shewanella sp W3-18-1 | ||||
Position: -352
Score: 3.94524 Sequence: ATGTAACCGTATCGTTCCAC
Position: -268
Score: 4.02177 Sequence: ACGTAATGATTAGTTTACGA
Locus tag: Sputw3181_2712
Name: hmgC Funciton: Fumarylacetoacetase (EC 3.7.1.2)
Locus tag: Sputw3181_2711
Name: hmgB Funciton: Maleylacetoacetate isomerase (EC 5.2.1.2) |
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hmgC-hmgB | -352 | 3.9 | ATGTAACCGTATCGTTCCAC | Sputw3181_2712 |
-268 | 4 | ACGTAATGATTAGTTTACGA | ||
Shewanella woodyi ATCC 51908 | ||||
Position: -256
Score: 4.24974 Sequence: ATGTAACAAGAGATTGCCAC
Position: -172
Score: 4.77762 Sequence: CTGTAATTATTTATTTACAA
Locus tag: Swoo_1718
Name: hmgC Funciton: Fumarylacetoacetase (EC 3.7.1.2)
Locus tag: Swoo_1719
Name: hmgB Funciton: Maleylacetoacetate isomerase (EC 5.2.1.2) |
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hmgC-hmgB | -256 | 4.2 | ATGTAACAAGAGATTGCCAC | Swoo_1718 |
-172 | 4.8 | CTGTAATTATTTATTTACAA |