Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing aceB gene

Properties
Regulog: TyrR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: TyrR
Regulation mode: activator
Biological process: Amino acid utilization
Effector: Tyrosine; Phenylalanine
Phylum: Proteobacteria/gamma
Built upon 312 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -450
Score: 4.08538
Sequence: TTGTAAATTAAATATTAAAT
Position: -364
Score: 3.73938
Sequence: GTGTATTAAAAATCTTACAG
Locus tag: Sama_2381
Name: aceB
Funciton: Malate synthase (EC 2.3.3.9)
Locus tag: Sama_2380
Name: aceA
Funciton: Isocitrate lyase (EC 4.1.3.1)
aceB-aceA -450 4.1 TTGTAAATTAAATATTAAAT Sama_2381
-364 3.7 GTGTATTAAAAATCTTACAG
Shewanella baltica OS155
Position: -380
Score: 3.58661
Sequence: CTGTATTAATATATTTACTG
Locus tag: Sbal_1316
Name: aceB
Funciton: Malate synthase (EC 2.3.3.9)
Locus tag: Sbal_1317
Name: aceA
Funciton: Isocitrate lyase (EC 4.1.3.1)
aceB-aceA -380 3.6 CTGTATTAATATATTTACTG Sbal_1316
Shewanella denitrificans OS217
Position: -324
Score: 3.99665
Sequence: TTGTAAGTTATTATTTACTG
Locus tag: Sden_1245
Name: aceB
Funciton: Malate synthase (EC 2.3.3.9)
Locus tag: Sden_1246
Name: aceA
Funciton: Isocitrate lyase (EC 4.1.3.1)
aceB-aceA -324 4 TTGTAAGTTATTATTTACTG Sden_1245
Shewanella frigidimarina NCIMB 400
Position: -458
Score: 4.38871
Sequence: tgGTAAAGaaAtATTTACAg
Locus tag: Sfri_1101
Name: aceB
Funciton: Malate synthase (EC 2.3.3.9)
Locus tag: Sfri_1102
Name: aceA
Funciton: Isocitrate lyase (EC 4.1.3.1)
aceB-aceA -458 4.4 tgGTAAAGaaAtATTTACAg Sfri_1101
Shewanella halifaxensis HAW-EB4
Position: -458
Score: 4.12361
Sequence: aTGTAAAagTAtATTgACgC
Locus tag: Shal_1352
Name: aceB
Funciton: Malate synthase (EC 2.3.3.9)
aceB -458 4.1 aTGTAAAagTAtATTgACgC Shal_1352
Shewanella loihica PV-4
Position: -393
Score: 3.37001
Sequence: CTGTATCGACAAAATTACTA
Locus tag: Shew_1275
Name: aceB
Funciton: Malate synthase (EC 2.3.3.9)
Locus tag: Shew_1276
Name: aceA
Funciton: Isocitrate lyase (EC 4.1.3.1)
aceB-aceA -393 3.4 CTGTATCGACAAAATTACTA Shew_1275
Shewanella oneidensis MR-1
Position: -372
Score: 3.72413
Sequence: GTGTAATCATTGTTTTTCGA
Locus tag: SO_1483
Name: aceB
Funciton: Malate synthase (EC 2.3.3.9)
Locus tag: SO_1484
Name: aceA
Funciton: Isocitrate lyase (EC 4.1.3.1)
aceB-aceA -372 3.7 GTGTAATCATTGTTTTTCGA SO_1483
Shewanella pealeana ATCC 700345
Position: -415
Score: 3.89022
Sequence: GTGGCAATAATTGTTAACGA
Locus tag: Spea_1290
Name: aceB
Funciton: Malate synthase (EC 2.3.3.9)
aceB -415 3.9 GTGGCAATAATTGTTAACGA Spea_1290
Shewanella piezotolerans WP3
Position: -412
Score: 4.16432
Sequence: CTGTATTTATAATATTACAC
Locus tag: swp_1433
Name: aceB
Funciton: Malate synthase (EC 2.3.3.9)
aceB -412 4.2 CTGTATTTATAATATTACAC swp_1433
Shewanella putrefaciens CN-32
Position: -304
Score: 4.69121
Sequence: GTGTAATTATAAATTTACGT
Locus tag: Sputcn32_1238
Name: aceB
Funciton: Malate synthase (EC 2.3.3.9)
Locus tag: Sputcn32_1239
Name: aceA
Funciton: Isocitrate lyase (EC 4.1.3.1)
aceB-aceA -304 4.7 GTGTAATTATAAATTTACGT Sputcn32_1238
Shewanella sediminis HAW-EB3
Position: -371
Score: 4.23351
Sequence: CTGTAAGTTTATTTTTACGC
Locus tag: Ssed_1414
Name: aceB
Funciton: Malate synthase (EC 2.3.3.9)
Locus tag: Ssed_1415
Name: aceA
Funciton: Isocitrate lyase (EC 4.1.3.1)
aceB-aceA -371 4.2 CTGTAAGTTTATTTTTACGC Ssed_1414
Shewanella sp ANA-3
Position: -372
Score: 4.29092
Sequence: CTGTATATTTAAATTTTCAA
Locus tag: Shewana3_2943
Name: aceB
Funciton: Malate synthase (EC 2.3.3.9)
Locus tag: Shewana3_2942
Name: aceA
Funciton: Isocitrate lyase (EC 4.1.3.1)
aceB-aceA -372 4.3 CTGTATATTTAAATTTTCAA Shewana3_2943
Shewanella sp MR-4
Position: -372
Score: 4.29092
Sequence: CTGTATAGTTAAATTTTCAA
Locus tag: Shewmr4_2767
Name: aceB
Funciton: Malate synthase (EC 2.3.3.9)
Locus tag: Shewmr4_2766
Name: aceA
Funciton: Isocitrate lyase (EC 4.1.3.1)
aceB-aceA -372 4.3 CTGTATAGTTAAATTTTCAA Shewmr4_2767
Shewanella sp MR-7
Position: -372
Score: 3.81731
Sequence: CTGTACATTTAAATTTTCAG
Locus tag: Shewmr7_2845
Name: aceB
Funciton: Malate synthase (EC 2.3.3.9)
Locus tag: Shewmr7_2844
Name: aceA
Funciton: Isocitrate lyase (EC 4.1.3.1)
aceB-aceA -372 3.8 CTGTACATTTAAATTTTCAG Shewmr7_2845
Shewanella sp W3-18-1
Position: -303
Score: 4.49891
Sequence: GTGTAATTATAAATTTACTT
Locus tag: Sputw3181_2866
Name: aceB
Funciton: Malate synthase (EC 2.3.3.9)
Locus tag: Sputw3181_2865
Name: aceA
Funciton: Isocitrate lyase (EC 4.1.3.1)
aceB-aceA -303 4.5 GTGTAATTATAAATTTACTT Sputw3181_2866
Shewanella woodyi ATCC 51908
Position: -401
Score: 3.91313
Sequence: GTGTATCATTAAGTTTACTT
Position: -341
Score: 3.6064
Sequence: TTGGTAAATTTGTCTGACAA
Locus tag: Swoo_1528
Name: aceB
Funciton: Malate synthase (EC 2.3.3.9)
aceB -401 3.9 GTGTATCATTAAGTTTACTT Swoo_1528
-341 3.6 TTGGTAAATTTGTCTGACAA
© 2009-2020 RegPrecise