Orthologous regulated operons containing bkdB gene
Regulog: | TyrR - Shewanellaceae |
Regulator type: | Transcription factor |
Regulator family: | TyrR |
Regulation mode: | activator |
Biological process: | Amino acid utilization |
Effector: | Tyrosine; Phenylalanine |
Phylum: | Proteobacteria/gamma |
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Operon | Position | Score | Sequence | Locus Tag of the First Gene |
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Shewanella amazonensis SB2B | ||||
Position: -150
Score: 4.29316 Sequence: CTGTAAAGCAATTAATACAT
Locus tag: Sama_1709
Name: bkdA1 Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)
Locus tag: Sama_1710
Name: bkdA2 Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)
Locus tag: Sama_1711
Name: bkdB Funciton: Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168) |
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bkdA1-bkdA2-bkdB | -150 | 4.3 | CTGTAAAGCAATTAATACAT | Sama_1709 |
Shewanella baltica OS155 | ||||
Position: -160
Score: 4.91636 Sequence: TTGTAAAGCAATATATACAT
Locus tag: Sbal_4508
Name: bkdA1 Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)
Locus tag: Sbal_4507
Name: bkdA2 Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)
Locus tag: Sbal_4506
Name: bkdB Funciton: Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168) |
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bkdA1-bkdA2-bkdB | -160 | 4.9 | TTGTAAAGCAATATATACAT | Sbal_4508 |
Shewanella denitrificans OS217 | ||||
Position: -153
Score: 4.48424 Sequence: GCGTAAAGCAAATTATACAA
Locus tag: Sden_1786
Name: bkdA1 Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)
Locus tag: Sden_1787
Name: bkdA2 Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)
Locus tag: Sden_1788
Name: bkdB Funciton: Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168) |
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bkdA1-bkdA2-bkdB | -153 | 4.5 | GCGTAAAGCAAATTATACAA | Sden_1786 |
Shewanella frigidimarina NCIMB 400 | ||||
Position: -156
Score: 4.49875 Sequence: TCGTAAAGCAATATATACAT
Locus tag: Sfri_1935
Name: bkdA1 Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)
Locus tag: Sfri_1936
Name: bkdA2 Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)
Locus tag: Sfri_1937
Name: bkdB Funciton: Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168) |
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bkdA1-bkdA2-bkdB | -156 | 4.5 | TCGTAAAGCAATATATACAT | Sfri_1935 |
Shewanella halifaxensis HAW-EB4 | ||||
Position: -161
Score: 4.82092 Sequence: ATGTAAACCAATATATACAT
Locus tag: Shal_2234
Name: bkdA1 Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)
Locus tag: Shal_2233
Name: bkdA2 Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)
Locus tag: Shal_2232
Name: bkdB Funciton: Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168) |
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bkdA1-bkdA2-bkdB | -161 | 4.8 | ATGTAAACCAATATATACAT | Shal_2234 |
Shewanella loihica PV-4 | ||||
Position: -175
Score: 4.70177 Sequence: TTGTAAAGCTAGCGATACAT
Locus tag: Shew_1925
Name: bkdA1 Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)
Locus tag: Shew_1926
Name: bkdA2 Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)
Locus tag: Shew_1927
Name: bkdB Funciton: Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168) |
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bkdA1-bkdA2-bkdB | -175 | 4.7 | TTGTAAAGCTAGCGATACAT | Shew_1925 |
Shewanella oneidensis MR-1 | ||||
Position: -160
Score: 4.91636 Sequence: TTGTAAAGCAATATATACAT
Locus tag: SO_2339
Name: bkdA1 Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)
Locus tag: SO_2340
Name: bkdA2 Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)
Locus tag: SO_2341
Name: bkdB Funciton: Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168) |
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bkdA1-bkdA2-bkdB | -160 | 4.9 | TTGTAAAGCAATATATACAT | SO_2339 |
Shewanella pealeana ATCC 700345 | ||||
Position: -161
Score: 4.82092 Sequence: ATGTAAACCAATATATACAT
Locus tag: Spea_2246
Name: bkdA1 Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)
Locus tag: Spea_2245
Name: bkdA2 Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)
Locus tag: Spea_2244
Name: bkdB Funciton: Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168) |
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bkdA1-bkdA2-bkdB | -161 | 4.8 | ATGTAAACCAATATATACAT | Spea_2246 |
Shewanella piezotolerans WP3 | ||||
Position: -162
Score: 4.82092 Sequence: ATGTAAACCAATATATACAT
Locus tag: swp_2606
Name: bkdA1 Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)
Locus tag: swp_2605
Name: bkdA2 Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)
Locus tag: swp_2604
Name: bkdB Funciton: Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168) |
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bkdA1-bkdA2-bkdB | -162 | 4.8 | ATGTAAACCAATATATACAT | swp_2606 |
Shewanella putrefaciens CN-32 | ||||
Position: -160
Score: 4.91636 Sequence: TTGTAAAGCAATATATACAT
Locus tag: Sputcn32_1885
Name: bkdA1 Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)
Locus tag: Sputcn32_1886
Name: bkdA2 Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)
Locus tag: Sputcn32_1887
Name: bkdB Funciton: Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168) |
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bkdA1-bkdA2-bkdB | -160 | 4.9 | TTGTAAAGCAATATATACAT | Sputcn32_1885 |
Shewanella sediminis HAW-EB3 | ||||
Position: -172
Score: 4.40072 Sequence: TTGTAAAGCTAAAGATACGC
Locus tag: Ssed_2329
Name: bkdA1 Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)
Locus tag: Ssed_2328
Name: bkdA2 Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)
Locus tag: Ssed_2327
Name: bkdB Funciton: Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168) |
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bkdA1-bkdA2-bkdB | -172 | 4.4 | TTGTAAAGCTAAAGATACGC | Ssed_2329 |
Shewanella sp ANA-3 | ||||
Position: -160
Score: 4.84932 Sequence: TTGTAAAGCATTATATACAT
Locus tag: Shewana3_2131
Name: bkdA1 Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)
Locus tag: Shewana3_2130
Name: bkdA2 Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)
Locus tag: Shewana3_2129
Name: bkdB Funciton: Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168) |
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bkdA1-bkdA2-bkdB | -160 | 4.8 | TTGTAAAGCATTATATACAT | Shewana3_2131 |
Shewanella sp MR-4 | ||||
Position: -160
Score: 4.84932 Sequence: TTGTAAAGCATTATATACAT
Locus tag: Shewmr4_2028
Name: bkdA1 Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)
Locus tag: Shewmr4_2027
Name: bkdA2 Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)
Locus tag: Shewmr4_2026
Name: bkdB Funciton: Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168) |
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bkdA1-bkdA2-bkdB | -160 | 4.8 | TTGTAAAGCATTATATACAT | Shewmr4_2028 |
Shewanella sp MR-7 | ||||
Position: -160
Score: 4.84932 Sequence: TTGTAAAGCATTATATACAT
Locus tag: Shewmr7_1947
Name: bkdA1 Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)
Locus tag: Shewmr7_1948
Name: bkdA2 Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)
Locus tag: Shewmr7_1949
Name: bkdB Funciton: Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168) |
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bkdA1-bkdA2-bkdB | -160 | 4.8 | TTGTAAAGCATTATATACAT | Shewmr7_1947 |
Shewanella sp W3-18-1 | ||||
Position: -160
Score: 4.91636 Sequence: TTGTAAAGCAATATATACAT
Locus tag: Sputw3181_2123
Name: bkdA1 Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)
Locus tag: Sputw3181_2122
Name: bkdA2 Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)
Locus tag: Sputw3181_2121
Name: bkdB Funciton: Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168) |
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bkdA1-bkdA2-bkdB | -160 | 4.9 | TTGTAAAGCAATATATACAT | Sputw3181_2123 |
Shewanella woodyi ATCC 51908 | ||||
Position: -171
Score: 4.03349 Sequence: ATGTAAAGCTAAACATACGG
Locus tag: Swoo_2278
Name: bkdA1 Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)
Locus tag: Swoo_2279
Name: bkdA2 Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)
Locus tag: Swoo_2280
Name: bkdB Funciton: Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168) |
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bkdA1-bkdA2-bkdB | -171 | 4 | ATGTAAAGCTAAACATACGG | Swoo_2278 |