Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing garD gene

Properties
Regulog: SdaR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: SdaR
Regulation mode: activator
Biological process: Glucarate utilization; Galactarate utilization
Effector: Glycerate
Phylum: Proteobacteria/gamma
Built upon 31 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Citrobacter koseri ATCC BAA-895
Position: -223
Score: 5.5751
Sequence: TTTTGAGCATTTGCACAACG
Locus tag: CKO_04527
Name: garD
Funciton: D-galactarate dehydratase (EC 4.2.1.42)
garD -223 5.6 TTTTGAGCATTTGCACAACG CKO_04527
Enterobacter sp. 638
Position: -224
Score: 5.37345
Sequence: ATTTGAGCATATGCACAACC
Locus tag: Ent638_3570
Name: garD
Funciton: D-galactarate dehydratase (EC 4.2.1.42)
garD -224 5.4 ATTTGAGCATATGCACAACC Ent638_3570
Erwinia carotovora subsp. atroseptica SCRI1043
Position: -316
Score: 4.55689
Sequence: GTTGGTGCACTTGCCCTATA
Position: -140
Score: 4.15729
Sequence: CTTAGGTCAATTGCATAATG
Locus tag: ECA3578
Name: garD
Funciton: D-galactarate dehydratase (EC 4.2.1.42)
garD -316 4.6 GTTGGTGCACTTGCCCTATA ECA3578
-140 4.2 CTTAGGTCAATTGCATAATG
Escherichia coli str. K-12 substr. MG1655
Position: -250
Score: 4.50599
Sequence: CATTGTGCAAATGCTAATTT
Position: -208
Score: 5.98822
Sequence: TTTTGAGCATATGCACATAA
Locus tag: b3128
Name: garD
Funciton: D-galactarate dehydratase (EC 4.2.1.42)
garD -250 4.5 CATTGTGCAAATGCTAATTT b3128
-208 6 TTTTGAGCATATGCACATAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Position: -206
Score: 4.69404
Sequence: AATTGTGCTTATGCCATAAG
Locus tag: KPN_03540
Name: garD
Funciton: D-galactarate dehydratase (EC 4.2.1.42)
garD -206 4.7 AATTGTGCTTATGCCATAAG KPN_03540
Salmonella typhimurium LT2
Position: -276
Score: 4.77058
Sequence: CATTGTGCAAACGCTCATTA
Position: -233
Score: 5.12915
Sequence: TTTTGAGCATACGCCCATGA
Locus tag: STM3250
Name: garD
Funciton: D-galactarate dehydratase (EC 4.2.1.42)
garD -276 4.8 CATTGTGCAAACGCTCATTA STM3250
-233 5.1 TTTTGAGCATACGCCCATGA
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